Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0125200 Salix brachista HOM05D006339 ORTHO05D007892 3.3e-83 311.6 154 100.0
Potri.001G435300 Populus trichocarpa HOM05D006339 ORTHO05D007892 1.6e-61 239.6 123 92.7
Potri.001G429200 Populus trichocarpa HOM05D006339 ORTHO05D007892 3.6e-61 238.4 123 91.9
Potri.001G432400 Populus trichocarpa HOM05D006339 ORTHO05D007892 3.6e-61 238.4 125 91.2
Potri.011G139300 Populus trichocarpa HOM05D006339 ORTHO05D007892 6.1e-61 237.7 123 92.7
Potri.001G425800 Populus trichocarpa HOM05D006339 ORTHO05D007892 2.3e-60 235.7 123 91.1
Sabra16G0289600 Salix brachista HOM05D006339 ORTHO05D007892 8.9e-60 233.8 125 88.8
Manes.11G076700 Manihot esculenta HOM05D006339 ORTHO05D007892 4.6e-56 221.5 122 86.1
TWI81G1088 Tripterygium wilfordii HOM05D006339 ORTHO05D007892 2.3e-55 219.2 123 83.7
Glyma.18G281300 Glycine max HOM05D006339 ORTHO05D007892 6.6e-55 217.6 118 89.0
Phvul.008G019700 Phaseolus vulgaris HOM05D006339 ORTHO05D007892 6.6e-55 217.6 112 92.9
VMungo1383G1391 Vigna mungo HOM05D006339 ORTHO05D007892 8.6e-55 217.2 112 92.9
Ca_08200_v3 Cicer arietinum L. HOM05D006339 ORTHO05D007892 1.9e-54 216.1 114 91.2
ClCG01G008260 Citrullus lanatus HOM05D006339 ORTHO05D007892 1.9e-54 216.1 115 90.4
Ciclev10016247m.g Citrus clementina HOM05D006339 ORTHO05D007892 1.9e-54 216.1 122 86.9
MELO3C025063.2 Cucumis melo HOM05D006339 ORTHO05D007892 3.3e-54 215.3 119 87.4
CsaV3_5G020130 Cucumis sativus L. HOM05D006339 ORTHO05D007892 3.3e-54 215.3 119 87.4
COL.COLO4_13376 Corchorus olitorius HOM05D006339 ORTHO05D007892 7.3e-54 214.2 119 85.7
Gohir.D07G240000 Gossypium hirsutum HOM05D006339 ORTHO05D007892 7.3e-54 214.2 116 87.1
Thecc.04G048000 Theobroma cacao HOM05D006339 ORTHO05D007892 7.3e-54 214.2 119 85.7
Lj1g0006115 Lotus japonicus HOM05D006339 ORTHO05D007892 1.2e-53 213.4 127 84.3
arahy.Tifrunner.gnm1.ann1.RW2HW9 Arachis hypogaea HOM05D006339 ORTHO05D007892 1.6e-53 213.0 115 89.6
arahy.Tifrunner.gnm1.ann1.WXC194 Arachis hypogaea HOM05D006339 ORTHO05D007892 1.6e-53 213.0 115 89.6
Eucgr.G01929 Eucalyptus grandis HOM05D006339 ORTHO05D007892 2.1e-53 212.6 118 86.4
TPR.G15412 Trifolium pratense HOM05D006339 ORTHO05D007892 2.8e-53 212.2 114 89.5
GSVIVG01032984001 Vitis vinifera HOM05D006339 ORTHO05D007892 2.8e-53 212.2 119 86.6
Nitab4.5_0000898g0050 Nicotiana tabacum HOM05D006339 ORTHO05D007892 3.6e-53 211.8 123 82.9
Hund04181 Selenicereus undatus HOM05D006339 ORTHO05D007892 3.6e-53 211.8 119 85.7
Ah.02g128820 Amaranthus hybridus HOM05D006339 ORTHO05D007892 4.7e-53 211.5 123 83.7
Duzib264G0796 Durio zibethinus HOM05D006339 ORTHO05D007892 4.7e-53 211.5 116 86.2
Medtr7g084140 Medicago truncatula HOM05D006339 ORTHO05D007892 4.7e-53 211.5 114 89.5
Dinv33278 Davidia involucrata HOM05D006339 ORTHO05D007892 6.1e-53 211.1 123 82.9
AL4G35130 Arabidopsis lyrata HOM05D006339 ORTHO05D007892 8.0e-53 210.7 114 88.6
Sed0000694 Sechium edule HOM05D006339 ORTHO05D007892 8.0e-53 210.7 124 83.9
Sopen09g034880 Solanum pennellii HOM05D006339 ORTHO05D007892 8.0e-53 210.7 123 82.9
Cpa.g.sc70.64 Carica papaya HOM05D006339 ORTHO05D007892 1.0e-52 210.3 119 83.2
Sed0011617 Sechium edule HOM05D006339 ORTHO05D007892 1.0e-52 210.3 114 88.6
TAR622G0978 Trochodendron aralioides HOM05D006339 ORTHO05D007892 1.0e-52 210.3 123 84.6
MSTRG.16761 Avicennia marina HOM05D006339 ORTHO05D007892 1.4e-52 209.9 117 86.3
Gorai.001G276200 Gossypium raimondii HOM05D006339 ORTHO05D007892 1.4e-52 209.9 117 87.2
QL02p069471 Quercus lobata HOM05D006339 ORTHO05D007892 1.4e-52 209.9 122 82.8
unitig_0.g1640 Utricularia gibba HOM05D006339 ORTHO05D007892 1.4e-52 209.9 114 87.7
C04p09550 Brassica napus HOM05D006339 ORTHO05D007892 1.8e-52 209.5 114 86.8
BolC4t22561H Brassica oleracea HOM05D006339 ORTHO05D007892 1.8e-52 209.5 114 86.8
BraA05t19756Z Brassica rapa HOM05D006339 ORTHO05D007892 1.8e-52 209.5 114 86.8
Gohir.A07G232800 Gossypium hirsutum HOM05D006339 ORTHO05D007892 1.8e-52 209.5 116 86.2
Aa31LG3G16140 Aethionema arabicum HOM05D006339 ORTHO05D007892 2.3e-52 209.1 114 86.8
Carub.0004s2010 Capsella rubella HOM05D006339 ORTHO05D007892 2.3e-52 209.1 114 86.8
CiPaw.03G001600 Carya illinoinensis HOM05D006339 ORTHO05D007892 2.3e-52 209.1 119 84.9
Sc07g0003800 Simmondsia chinensis HOM05D006339 ORTHO05D007892 2.3e-52 209.1 122 83.6
PGSC0003DMG401031287 Solanum tuberosum HOM05D006339 ORTHO05D007892 2.3e-52 209.1 123 82.1
CARHR132720 Cardamine hirsuta HOM05D006339 ORTHO05D007892 3.1e-52 208.8 116 86.2
vmacro01209 Vaccinium macrocarpon HOM05D006339 ORTHO05D007892 3.1e-52 208.8 123 80.5
Atru.chr6.2696 Acer truncatum HOM05D006339 ORTHO05D007892 4.0e-52 208.4 122 83.6
A05p07900 Brassica napus HOM05D006339 ORTHO05D007892 4.0e-52 208.4 114 86.0
CSS0020777 Camellia sinensis var. sinensis HOM05D006339 ORTHO05D007892 4.0e-52 208.4 124 81.5
AT2G38130 Arabidopsis thaliana HOM05D006339 ORTHO05D007892 5.2e-52 208.0 119 83.2
Peaxi162Scf00047g00520 Petunia axillaris HOM05D006339 ORTHO05D007892 5.2e-52 208.0 123 81.3
SalBow7G3927 Salvia bowleyana HOM05D006339 ORTHO05D007892 5.2e-52 208.0 112 88.4
Migut.F00012 Erythranthe guttata HOM05D006339 ORTHO05D007892 6.8e-52 207.6 122 83.6
Lalb_Chr01g0015281 Lupinus albus HOM05D006339 ORTHO05D007892 6.8e-52 207.6 123 82.1
PSO478G5314 Papaver somniferum HOM05D006339 ORTHO05D007892 6.8e-52 207.6 122 82.0
Solyc09g091980.3 Solanum lycopersicum HOM05D006339 ORTHO05D007892 6.8e-52 207.6 123 82.1
DCAR_014468 Daucus carota HOM05D006339 ORTHO05D007892 8.9e-52 207.2 120 82.5
PGR042G1393 Punica granatum HOM05D006339 ORTHO05D007892 1.2e-51 206.8 114 86.8
CDE06G1050 Ceratophyllum demersum HOM05D006339 ORTHO05D007892 1.5e-51 206.5 117 82.1
Psat3g093240 Pisum sativum HOM05D006339 ORTHO05D007892 2.6e-51 205.7 114 85.1
CAN.G1635.5 Capsicum annuum HOM05D006339 ORTHO05D007892 4.4e-51 204.9 123 79.7
Thhalv10017294m.g Eutrema salsugineum HOM05D006339 ORTHO05D007892 4.4e-51 204.9 114 85.1
Cc07_g01310 Coffea canephora HOM05D006339 ORTHO05D007892 9.8e-51 203.8 126 79.4
PSO017G1553 Papaver somniferum HOM05D006339 ORTHO05D007892 9.8e-51 203.8 127 78.7
Rhsim12G0052300 Rhododendron simsii HOM05D006339 ORTHO05D007892 9.8e-51 203.8 119 82.4
THA.LOC104802366 Tarenaya hassleriana HOM05D006339 ORTHO05D007892 9.8e-51 203.8 112 85.7
HPP92_023026 Vanilla planifolia HOM05D006339 ORTHO05D007892 1.3e-50 203.4 112 86.6
Actinidia09846 Actinidia chinensis HOM05D006339 ORTHO05D007892 1.7e-50 203.0 119 81.5
SGA_v2.0_scaffold44G16955 Striga asiatica HOM05D006339 ORTHO05D007892 1.7e-50 203.0 114 84.2
CDE02G1951 Ceratophyllum demersum HOM05D006339 ORTHO05D007892 2.9e-50 202.2 111 86.5
Sp4g20450 Schrenkiella parvula HOM05D006339 ORTHO05D007892 3.7e-50 201.8 123 80.5
ATR0582G044 Amborella trichopoda HOM05D006339 ORTHO05D007892 8.3e-50 200.7 109 86.2
Prupe.3G313900 Prunus persica HOM05D006339 ORTHO05D007892 2.4e-49 199.1 114 84.2
Aqoxy5G03118 Aquilegia oxysepala HOM05D006339 ORTHO05D007892 3.2e-49 198.7 107 86.0
Haze_14951 Corylus avellana HOM05D006339 ORTHO05D007892 4.1e-49 198.4 137 73.7
Nitab4.5_0001416g0050 Nicotiana tabacum HOM05D006339 ORTHO05D007892 7.0e-49 197.6 118 80.5
ECA246G5025 Erigeron canadensis HOM05D006339 ORTHO05D007892 1.2e-48 196.8 112 83.9
Hma1.2p1_1389F.1_g280000 Hydrangea macrophylla HOM05D006339 ORTHO05D007892 2.7e-48 195.7 107 84.1
Lsat_1_v5_gn_0_22620 Lactuca sativa HOM05D006339 ORTHO05D007892 2.7e-48 195.7 110 84.5
RcHm_v2.0_Chr2g0176551 Rosa chinensis HOM05D006339 ORTHO05D007892 7.8e-48 194.1 123 78.0
MD09G1002300 Malus domestica HOM05D006339 ORTHO05D007892 1.0e-47 193.7 118 80.5
FvH4_6g54330 Fragaria vesca HOM05D006339 ORTHO05D007892 3.0e-47 192.2 110 82.7
HanXRQChr17g0550981 Helianthus annuus HOM05D006339 ORTHO05D007892 5.0e-47 191.4 108 83.3
Zm00001eb113280 Zea mays HOM05D006339 ORTHO05D007892 8.6e-47 190.7 112 82.1
Os11g0525800 Oryza sativa ssp. japonica HOM05D006339 ORTHO05D007892 1.5e-46 189.9 109 84.4
FAN05G1930 Fragaria x ananassa HOM05D006339 ORTHO05D007892 4.3e-46 188.3 110 80.9
Zm00001eb198110 Zea mays HOM05D006339 ORTHO05D007892 6.2e-45 184.5 109 81.7
Oeu048678.3 Olea europaea HOM05D006339 ORTHO05D007892 1.1e-44 183.7 162 60.5
SEGI_41446 Sequoiadendron giganteum HOM05D006339 ORTHO05D007892 6.8e-44 181.0 126 69.8
MBI10_g42609_MAGBIO Magnolia biondii HOM05D006339 ORTHO05D007892 3.4e-43 178.7 112 80.4
MBI10_g46354_MAGBIO Magnolia biondii HOM05D006339 ORTHO05D007892 2.1e-40 169.5 92 85.9
MBI10_g47709_MAGBIO Magnolia biondii HOM05D006339 ORTHO05D007892 2.1e-40 169.5 92 85.9
Lj7C617T19 Lonicera japonica HOM05D006339 ORTHO05D007892 2.7e-40 169.1 105 75.2
Pp3c21_5060 Physcomitrium patens HOM05D006339 ORTHO05D007892 8.6e-39 164.1 123 67.5
AUR62017432 Chenopodium quinoa HOM05D006339 ORTHO05D007892 2.5e-38 162.5 91 84.6
Mapoly0127s0038 Marchantia polymorpha HOM05D006339 ORTHO05D007892 7.3e-38 161.0 106 74.5
Pp3c18_17900 Physcomitrium patens HOM05D006339 ORTHO05D007892 7.3e-38 161.0 113 66.4
SMO266G0054 Selaginella moellendorffii HOM05D006339 ORTHO05D007892 9.5e-38 160.6 106 72.6
EL10Ac6g13407 Beta vulgaris HOM05D006339 ORTHO05D007892 1.2e-35 153.7 119 63.9
Potri.001G433800 Populus trichocarpa HOM05D006339 ORTHO05D007892 1.7e-34 149.8 85 83.5
MD05G1042000 Malus domestica HOM05D006339 ORTHO05D007892 8.4e-34 147.5 87 81.6
CBR_g48357 Chara braunii HOM05D006339 ORTHO05D007892 1.9e-33 146.4 108 64.8
Duzib187G1607 Durio zibethinus HOM05D006339 ORTHO05D007892 7.1e-33 144.4 116 65.5
PRCOL_00001995 Prasinoderma coloniale HOM05D006339 ORTHO05D007892 1.6e-29 133.3 106 61.3
Cre14.g623800 Chlamydomonas reinhardtii HOM05D006339 ORTHO05D007892 2.4e-28 129.4 123 53.7
MCO12G247 Micromonas commoda HOM05D006339 ORTHO05D007892 5.4e-25 118.2 106 51.9
FAN02G3444 Fragaria x ananassa HOM05D006339 ORTHO05D007892 2.1e-24 116.3 84 66.7
Nn3g16274 Nelumbo nucifera HOM05D006339 ORTHO05D007892 6.6e-23 111.3 61 86.9
AUR62037822 Chenopodium quinoa HOM05D006339 ORTHO05D007892 4.8e-21 105.1 61 82.0
Haze_27130 Corylus avellana HOM05D006339 ORTHO05D007892 4.4e-19 98.6 108 44.4
Cfa007162 Carpinus fangiana HOM05D006339 ORTHO05D007892 1.3e-13 80.5 47 83.0
BolC4t22511H Brassica oleracea HOM05D006339 ORTHO05D007892 3.6e-13 79.0 90 48.9
AagrBONN_evm.TU.Sc2ySwM_369.240 Anthoceros agrestis HOM05D006339 ORTHO05D007892 6.9e-12 74.7 47 74.5
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 6.7e-07 58.2 78 38.5
Glyma.08G257200 Glycine max HOM05D006339 ORTHO05D007892 9.6e-06 54.3 33 84.8


User provided reference genes

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