Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 6.6e-99 364.0 180 100.0
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 1.1e-61 240.4 178 71.3
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 3.9e-59 231.9 161 73.3
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 3.0e-51 205.7 176 61.4
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 6.7e-51 204.5 163 63.8
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 2.6e-50 202.6 178 59.0
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 5.7e-50 201.4 175 58.9
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 9.7e-50 200.7 163 63.2
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.7e-49 199.9 179 58.7
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.7e-49 199.9 164 64.0
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 1.7e-49 199.9 178 58.4
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 1.7e-49 199.9 178 57.9
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 1.7e-49 199.9 178 58.4
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 1.7e-49 199.9 178 58.4
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 4.8e-49 198.4 184 58.2
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 6.3e-49 198.0 178 59.0
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 8.2e-49 197.6 178 58.4
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 8.2e-49 197.6 179 59.2
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 1.8e-48 196.4 180 57.2
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 1.8e-48 196.4 173 60.1
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 2.4e-48 196.1 179 58.7
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 2.4e-48 196.1 181 59.1
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 2.4e-48 196.1 178 58.4
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 4.1e-48 195.3 179 58.7
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 4.1e-48 195.3 173 60.1
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 7.0e-48 194.5 178 57.9
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 7.0e-48 194.5 159 60.4
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 9.1e-48 194.1 178 57.9
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 9.1e-48 194.1 159 59.1
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 9.1e-48 194.1 160 62.5
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 1.2e-47 193.7 178 59.0
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 1.6e-47 193.4 179 58.1
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.6e-47 193.4 159 59.7
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.6e-47 193.4 181 58.0
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 2.0e-47 193.0 178 56.7
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 2.6e-47 192.6 179 58.1
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.6e-47 192.6 177 56.5
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 2.6e-47 192.6 178 53.9
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.6e-47 192.6 173 59.5
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 2.6e-47 192.6 173 59.5
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 3.5e-47 192.2 177 56.5
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 4.5e-47 191.8 174 59.8
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 4.5e-47 191.8 159 62.9
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.5e-47 191.8 178 55.1
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 4.5e-47 191.8 173 59.0
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 4.5e-47 191.8 178 54.5
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 5.9e-47 191.4 172 58.7
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 5.9e-47 191.4 173 58.4
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 5.9e-47 191.4 179 57.5
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.0e-46 190.7 177 56.5
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 1.0e-46 190.7 179 56.4
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 1.3e-46 190.3 178 53.9
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.3e-46 190.3 157 63.1
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 1.7e-46 189.9 179 57.0
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 2.2e-46 189.5 179 57.0
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 2.9e-46 189.1 179 57.0
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 2.9e-46 189.1 179 57.0
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.9e-46 189.1 159 61.0
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 2.9e-46 189.1 179 56.4
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.9e-46 189.1 172 57.0
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 3.8e-46 188.7 176 55.1
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 3.8e-46 188.7 178 56.2
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 5.0e-46 188.3 178 53.4
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 8.5e-46 187.6 179 55.3
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 8.5e-46 187.6 179 57.0
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 8.5e-46 187.6 181 55.2
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 8.5e-46 187.6 179 55.3
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 8.5e-46 187.6 207 52.2
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 1.1e-45 187.2 144 63.2
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.1e-45 187.2 158 59.5
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 1.5e-45 186.8 178 55.6
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.9e-45 186.4 165 57.6
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.9e-45 186.4 159 58.5
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.9e-45 186.4 172 58.1
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 2.5e-45 186.0 158 60.1
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 4.2e-45 185.3 163 57.7
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.2e-45 185.3 180 53.9
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 5.5e-45 184.9 179 56.4
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 1.2e-44 183.7 171 56.1
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.2e-44 183.7 180 52.8
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 1.6e-44 183.3 178 52.8
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 2.7e-44 182.6 173 55.5
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 3.6e-44 182.2 168 55.4
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 6.1e-44 181.4 180 55.0
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 6.1e-44 181.4 172 55.2
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 8.0e-44 181.0 178 54.5
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.4e-43 180.3 167 57.5
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 1.4e-43 180.3 167 57.5
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.4e-43 180.3 163 58.3
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 2.3e-43 179.5 174 53.4
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 5.2e-43 178.3 177 54.2
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 5.2e-43 178.3 163 55.2
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.5e-42 176.8 164 56.7
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 2.0e-42 176.4 151 58.3
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 4.4e-42 175.3 160 55.6
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.4e-42 175.3 178 52.8
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 5.7e-42 174.9 157 56.7
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 5.7e-42 174.9 169 56.8
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 7.5e-42 174.5 153 56.9
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 7.5e-42 174.5 161 58.4
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 1.3e-41 173.7 151 57.0
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 2.8e-41 172.6 170 51.8
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 4.8e-41 171.8 172 55.2
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 4.8e-41 171.8 154 57.1
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 2.4e-40 169.5 156 57.1
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 3.1e-40 169.1 152 55.9
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 7.7e-39 164.5 154 56.5
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 4.2e-37 158.7 152 53.9
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.6e-36 156.8 159 54.1
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 2.0e-34 149.8 168 48.2
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 1.6e-31 140.2 93 74.2
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 3.5e-31 139.0 93 73.1
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 5.9e-31 138.3 92 72.8
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.9e-29 133.3 101 66.3
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 3.2e-29 132.5 94 69.1
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 5.5e-29 131.7 137 51.1
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 7.8e-23 111.3 93 57.0
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 8.0e-20 101.3 131 50.4
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 1.6e-15 87.0 99 51.5
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.6e-12 77.0 43 76.7
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 5.2e-11 72.0 52 63.5
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 6.8e-11 71.6 47 63.8
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.1e-08 64.3 35 91.4
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.6e-07 60.5 63 50.8
A06p35450 Brassica napus HOM05D006458 ORTHO05D041657 1.3e-06 57.4 39 64.1
BraA06t26468Z Brassica rapa HOM05D006458 ORTHO05D041657 1.3e-06 57.4 39 64.1


User provided reference genes

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