Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.8e-67 258.5 128 100.0
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 3.8e-48 194.9 124 81.5
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.2e-46 189.9 124 81.5
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 3.6e-38 161.8 124 70.2
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-37 159.8 79 94.9
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-37 159.8 79 94.9
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 3.0e-37 158.7 123 70.7
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 6.7e-37 157.5 124 67.7
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.7e-35 152.9 124 65.3
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.7e-35 152.9 125 68.0
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 3.7e-35 151.8 124 66.1
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.4e-34 149.8 125 65.6
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.4e-34 149.1 126 65.9
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.9e-34 147.5 124 64.5
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 6.9e-34 147.5 125 65.6
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 6.9e-34 147.5 125 65.6
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 6.9e-34 147.5 125 65.6
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 9.1e-34 147.1 124 62.1
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.6e-33 145.6 125 62.4
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.4e-31 139.8 120 64.2
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.9e-31 139.4 124 61.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 2.5e-31 139.0 122 63.9
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.2e-31 138.7 119 64.7
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.7e-30 135.6 124 61.3
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.7e-30 134.8 127 59.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 4.7e-30 134.8 125 62.4
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.0e-29 133.7 124 61.3
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.4e-29 133.3 125 63.2
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.4e-29 133.3 120 60.8
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 5.1e-29 131.3 124 60.5
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 1.1e-28 130.2 127 59.8
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 1.5e-28 129.8 125 61.6
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.5e-28 129.8 124 61.3
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.7e-28 127.1 127 55.9
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 9.7e-28 127.1 127 55.9
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.7e-27 126.3 128 58.6
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 2.8e-27 125.6 126 57.9
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 2.8e-27 125.6 131 55.7
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 6.3e-27 124.4 124 58.9
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 8.2e-27 124.0 124 57.3
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.8e-26 122.9 128 56.2
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.3e-26 121.3 125 59.2
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.5e-25 119.8 124 57.3
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.5e-25 119.8 120 59.2
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.5e-25 119.8 124 58.9
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 4.5e-25 118.2 127 58.3
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 7.7e-25 117.5 125 54.4
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.7e-24 116.3 129 56.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.7e-24 116.3 127 55.9
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 2.9e-24 115.5 123 54.5
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 2.9e-24 115.5 123 54.5
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 3.8e-24 115.2 129 56.6
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 6.5e-24 114.4 127 53.5
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.5e-23 113.2 124 54.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.5e-23 113.2 124 54.0
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 3.2e-23 112.1 120 55.8
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 4.2e-23 111.7 130 54.6
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 4.2e-23 111.7 122 54.1
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 9.4e-23 110.5 129 51.9
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 4.7e-22 108.2 126 53.2
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 8.0e-22 107.5 125 52.0
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.0e-21 107.1 126 54.0
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.0e-21 107.1 122 54.9
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.4e-21 106.7 123 52.8
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 1.8e-21 106.3 120 54.2
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 2.3e-21 105.9 117 53.0
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 2.3e-21 105.9 122 51.6
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 4.0e-21 105.1 133 48.9
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 5.2e-21 104.8 87 64.4
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 6.7e-21 104.4 123 49.6
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 8.8e-21 104.0 133 49.6
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 8.8e-21 104.0 128 49.2
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.6e-20 102.4 124 52.4
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.6e-20 102.4 124 52.4
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.6e-20 102.4 118 49.2
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 9.7e-20 100.5 124 49.2
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 2.2e-19 99.4 103 56.3
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 4.8e-19 98.2 137 50.4
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 6.3e-19 97.8 121 50.4
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 8.2e-19 97.4 126 50.0
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.1e-18 97.1 126 50.0
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 1.1e-18 97.1 119 52.9
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.4e-18 96.7 131 51.1
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 3.1e-18 95.5 128 47.7
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 4.1e-18 95.1 131 49.6
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 7.0e-18 94.4 146 45.9
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 7.0e-18 94.4 123 50.4
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 1.2e-17 93.6 130 49.2
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 1.2e-17 93.6 86 61.6
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.2e-17 93.6 125 51.2
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.6e-17 93.2 121 46.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.0e-17 92.8 124 46.8
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.5e-17 92.0 130 51.5
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.5e-17 91.7 122 47.5
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 1.0e-16 90.5 136 50.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.7e-16 89.7 124 50.8
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.7e-16 89.7 123 47.2
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 2.2e-16 89.4 134 51.5
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 2.2e-16 89.4 134 51.5
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 2.9e-16 89.0 128 52.3
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 5.0e-16 88.2 121 45.5
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 8.5e-16 87.4 127 42.5
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.1e-15 87.0 125 45.6
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 1.9e-15 86.3 121 50.4
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.5e-15 85.9 129 51.9
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 2.5e-15 85.9 127 41.7
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 3.2e-15 85.5 123 48.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 7.2e-15 84.3 127 48.0
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.7e-14 82.4 128 44.5
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 4.7e-14 81.6 127 49.6
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 6.1e-14 81.3 126 42.1
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.0e-13 80.5 127 48.8
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-13 80.1 131 49.6
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.3e-13 79.3 124 44.4
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 5.2e-13 78.2 101 48.5
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.2e-12 77.0 126 42.1
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 2.0e-12 76.3 132 45.5
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 2.6e-12 75.9 126 38.1
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.1e-10 70.5 130 40.8
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 4.5e-09 65.1 103 41.7
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.0e-08 63.9 79 44.3
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 1.3e-08 63.5 121 38.8
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 2.1e-06 56.2 133 38.3
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 3.6e-06 55.5 79 45.6
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 8.0e-06 54.3 118 41.5


User provided reference genes

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