Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 1.2e-267 926.0 490 100.0
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.6e-192 676.4 418 87.1
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 7.7e-166 587.8 510 68.0
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 2.4e-87 327.0 428 50.7
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 1.0e-85 321.6 422 51.9
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 4.3e-84 316.2 426 49.1
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.2e-81 308.1 499 44.7
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 7.6e-81 305.4 400 50.5
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.3e-80 304.7 441 47.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 3.2e-79 300.1 447 46.5
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 7.1e-79 298.9 405 50.1
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 2.3e-77 293.9 445 47.4
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.9e-76 290.8 431 46.9
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.6e-75 287.7 409 46.7
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 6.3e-75 285.8 460 43.9
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 1.4e-74 284.6 426 45.1
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 4.5e-73 279.6 416 46.2
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 1.7e-72 277.7 402 48.5
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 5.5e-71 272.7 455 44.0
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.6e-70 271.2 507 40.6
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.1e-70 269.2 442 44.6
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.5e-68 264.6 350 51.1
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.3e-68 263.5 455 44.0
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 9.0e-66 255.4 444 44.8
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 9.0e-66 255.4 446 41.0
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.0e-64 251.9 402 44.5
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.7e-64 251.1 455 42.6
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 9.4e-63 245.4 427 43.3
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.6e-62 244.6 412 41.7
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 5.7e-60 236.1 364 44.2
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 4.1e-58 229.9 413 40.7
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.2e-57 228.4 415 41.4
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.9e-55 221.1 400 44.0
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.1e-54 217.6 404 41.8
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.1e-54 216.1 439 39.9
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 1.1e-52 211.8 426 38.5
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 2.8e-51 207.2 425 39.3
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 3.1e-50 203.8 418 39.5
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.3e-48 198.4 441 40.1
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.0e-48 196.4 441 35.6
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 3.6e-46 190.3 420 37.4
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.8e-45 188.0 444 36.3
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.5e-44 184.9 379 41.7
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.9e-39 167.9 429 34.7
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 3.0e-37 160.6 435 32.4
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.8e-34 151.4 440 34.3
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 7.0e-34 149.4 458 31.4
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 7.0e-34 149.4 400 33.8
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.7e-32 144.8 452 33.0
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 5.0e-32 143.3 432 31.7
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 3.2e-31 140.6 376 35.1
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 4.2e-31 140.2 486 31.3
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 4.2e-31 140.2 438 31.1
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 5.5e-31 139.8 545 28.6
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 7.2e-31 139.4 333 39.9
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 9.5e-31 139.0 457 29.3
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 9.5e-31 139.0 390 33.1
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 3.6e-30 137.1 457 30.2
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 6.1e-30 136.3 401 33.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 4.0e-29 133.7 433 30.9
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 5.2e-29 133.3 400 34.0
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.0e-28 131.3 480 30.2
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 2.0e-28 131.3 426 31.9
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 3.4e-28 130.6 439 30.8
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.3e-27 128.6 306 35.9
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.3e-27 128.6 441 30.6
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.0e-24 119.0 275 32.4
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.0e-24 119.0 520 27.5
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 6.6e-24 116.3 281 33.8
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.5e-23 115.2 278 37.4
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.5e-23 115.2 278 37.4
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.9e-23 114.8 418 29.4
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 4.7e-22 110.2 453 31.1
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 4.9e-19 100.1 419 29.8
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.8e-13 81.6 442 27.6
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 4.9e-11 73.6 306 30.1
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 7.0e-10 69.7 102 41.2
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.6e-09 68.6 418 28.0
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 3.0e-08 64.3 123 38.2
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 2.1e-06 58.2 42 57.1


User provided reference genes

Program Settings