Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 2.8e-37 158.7 119 100.0
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 2.8e-37 158.7 119 100.0
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 4.5e-35 151.4 119 97.5
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 2.5e-33 145.6 75 98.7
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 7.1e-33 144.1 75 97.3
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 1.5e-30 136.3 75 90.7
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 9.0e-28 127.1 75 85.3
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 2.0e-27 125.9 75 82.7
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 2.0e-27 125.9 75 81.3
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 1.3e-26 123.2 75 77.3
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 1.7e-26 122.9 75 80.0
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 1.7e-26 122.9 75 81.3
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 2.2e-26 122.5 75 80.0
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 2.2e-26 122.5 74 82.4
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.2e-26 122.5 75 78.7
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.2e-26 122.5 75 78.7
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 2.2e-26 122.5 75 78.7
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 2.2e-26 122.5 75 82.7
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 2.2e-26 122.5 75 78.7
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 2.9e-26 122.1 75 81.3
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 2.9e-26 122.1 74 81.1
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 8.4e-26 120.6 75 77.3
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 8.4e-26 120.6 75 80.0
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 1.1e-25 120.2 118 83.9
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 1.4e-25 119.8 75 76.0
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 1.9e-25 119.4 75 80.0
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 1.9e-25 119.4 75 78.7
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 1.9e-25 119.4 75 77.3
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 3.2e-25 118.6 75 78.7
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 4.2e-25 118.2 75 78.7
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 4.2e-25 118.2 75 74.7
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 5.5e-25 117.9 75 76.0
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 7.2e-25 117.5 75 76.0
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 9.3e-25 117.1 75 78.7
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 1.2e-24 116.7 75 76.0
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 1.6e-24 116.3 75 74.7
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 1.6e-24 116.3 75 73.3
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 2.1e-24 115.9 74 77.0
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 2.7e-24 115.5 75 77.3
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 2.7e-24 115.5 75 77.3
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 2.7e-24 115.5 72 79.2
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 2.7e-24 115.5 75 73.3
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 2.7e-24 115.5 75 73.3
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 3.5e-24 115.2 74 74.3
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 6.1e-24 114.4 75 74.7
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 7.9e-24 114.0 75 76.0
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 7.9e-24 114.0 75 76.0
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 1.0e-23 113.6 75 73.3
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 1.3e-23 113.2 75 70.7
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.8e-23 112.8 75 74.7
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.8e-23 112.8 75 74.7
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 2.3e-23 112.5 75 72.0
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 2.3e-23 112.5 75 74.7
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 3.0e-23 112.1 75 72.0
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 3.0e-23 112.1 75 72.0
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 3.0e-23 112.1 75 72.0
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 3.0e-23 112.1 75 72.0
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 5.1e-23 111.3 75 70.7
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 6.7e-23 110.9 75 72.0
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 8.7e-23 110.5 74 73.0
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 8.7e-23 110.5 74 71.6
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 1.1e-22 110.2 75 73.3
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 1.1e-22 110.2 74 71.6
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 1.5e-22 109.8 75 69.3
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 1.5e-22 109.8 75 73.3
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 1.9e-22 109.4 75 72.0
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 1.9e-22 109.4 75 73.3
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 1.9e-22 109.4 75 70.7
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 2.5e-22 109.0 75 69.3
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 3.3e-22 108.6 74 71.6
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 3.3e-22 108.6 74 71.6
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 4.3e-22 108.2 75 69.3
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 4.3e-22 108.2 75 72.0
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 4.3e-22 108.2 75 72.0
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 4.3e-22 108.2 75 66.7
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 5.7e-22 107.8 75 70.7
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 5.7e-22 107.8 75 70.7
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 5.7e-22 107.8 75 66.7
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 5.7e-22 107.8 75 69.3
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 1.3e-21 106.7 75 68.0
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 1.3e-21 106.7 75 70.7
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 1.6e-21 106.3 74 68.9
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 2.2e-21 105.9 75 72.0
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 4.8e-21 104.8 75 70.7
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 6.3e-21 104.4 75 65.3
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.4e-20 103.2 98 59.2
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 1.4e-20 103.2 75 70.7
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 2.4e-20 102.4 81 65.4
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 2.4e-20 102.4 81 65.4
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 4.1e-20 101.7 72 68.1
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 2.0e-19 99.4 77 66.2
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 2.6e-19 99.0 77 66.2
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 2.2e-18 95.9 74 59.5
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 3.2e-17 92.0 56 78.6
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 1.4e-15 86.7 53 77.4
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 3.0e-15 85.5 54 74.1
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 3.9e-15 85.1 60 66.7
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 2.0e-14 82.8 75 50.7
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 2.5e-14 82.4 73 57.5
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 9.7e-14 80.5 53 71.7
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 9.7e-14 80.5 73 53.4
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 3.1e-12 75.5 54 64.8
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 1.5e-11 73.2 53 67.9
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 1.0e-07 60.5 39 71.8
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 2.6e-06 55.8 75 37.3
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 5.7e-06 54.7 72 40.3


User provided reference genes

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