Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 7.9e-169 597.0 307 100.0
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 3.7e-134 481.9 270 91.9
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 1.6e-121 439.9 290 76.2
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 8.9e-120 434.1 290 76.2
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.9e-118 429.1 289 75.1
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 3.2e-117 425.6 271 77.1
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 3.2e-117 425.6 286 75.9
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 4.1e-117 425.2 290 74.1
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 4.1e-117 425.2 271 79.3
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 7.1e-117 424.5 271 78.2
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.6e-116 423.3 300 71.7
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.6e-116 423.3 271 77.5
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 2.1e-116 422.9 284 72.5
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.3e-115 420.2 271 76.8
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.7e-115 419.9 302 71.2
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.7e-115 419.9 271 77.1
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 1.7e-115 419.9 271 77.1
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.7e-115 419.9 269 75.5
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 5.1e-115 418.3 271 75.6
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.5e-114 416.8 271 76.0
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.5e-114 416.8 293 70.3
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 3.3e-114 415.6 300 70.7
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 3.3e-114 415.6 271 77.9
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 5.6e-114 414.8 267 76.4
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 5.6e-114 414.8 271 75.6
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 7.3e-114 414.5 269 75.8
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.6e-113 413.3 253 79.4
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.6e-113 413.3 271 75.3
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.1e-113 412.9 269 77.3
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 2.8e-113 412.5 270 76.7
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.8e-113 412.5 293 70.0
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 3.6e-113 412.1 286 72.0
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 6.2e-113 411.4 270 76.3
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 6.2e-113 411.4 302 69.2
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 8.1e-113 411.0 253 79.1
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.1e-112 410.6 301 70.4
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.3e-112 409.5 271 74.5
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 8.9e-112 407.5 291 68.7
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.2e-111 407.1 270 72.6
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.0e-111 406.4 269 73.6
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 3.4e-111 405.6 270 77.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 1.3e-110 403.7 271 76.0
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.7e-110 403.3 273 73.3
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.9e-110 402.5 271 73.4
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 2.9e-110 402.5 271 72.0
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.1e-109 400.6 235 85.1
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.1e-109 400.6 271 71.6
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 3.2e-109 399.1 266 74.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 3.2e-109 399.1 271 71.6
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 3.2e-109 399.1 269 74.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 4.1e-109 398.7 269 74.0
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.4e-109 398.3 266 74.4
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 5.4e-109 398.3 270 70.7
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 7.1e-109 397.9 290 70.0
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 9.2e-109 397.5 304 65.8
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 1.2e-108 397.1 283 69.6
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.2e-108 397.1 269 75.1
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.7e-108 396.0 268 72.4
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 4.6e-108 395.2 267 72.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 7.8e-108 394.4 269 73.2
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.0e-107 394.0 271 71.2
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.0e-107 394.0 271 71.6
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 3.0e-107 392.5 263 73.4
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 6.6e-107 391.3 298 67.8
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 8.6e-107 391.0 290 67.9
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.1e-106 390.6 263 72.2
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 1.9e-106 389.8 269 71.4
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 7.3e-106 387.9 289 68.2
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 7.3e-106 387.9 270 71.1
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 6.2e-105 384.8 282 70.6
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 1.1e-104 384.0 293 68.3
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 1.8e-104 383.3 270 70.0
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 3.1e-104 382.5 268 72.0
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 5.8e-103 378.3 268 71.3
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 9.9e-103 377.5 299 65.2
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.7e-102 376.7 271 70.8
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.2e-102 376.3 253 73.1
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 2.9e-102 375.9 268 71.3
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 6.4e-102 374.8 271 70.8
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.9e-101 373.2 266 72.2
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 4.2e-101 372.1 252 72.2
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.5e-100 369.0 234 73.9
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 4.6e-100 368.6 278 66.2
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 6.6e-99 364.8 255 70.2
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.6e-97 360.1 232 75.4
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 4.0e-96 355.5 248 70.6
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 9.0e-96 354.4 235 74.0
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.2e-94 349.7 210 81.4
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 6.4e-94 348.2 225 76.9
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 8.4e-94 347.8 257 66.5
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.1e-90 337.4 210 75.2
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 3.3e-90 335.9 270 64.1
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.6e-89 333.6 253 67.6
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.1e-88 330.9 283 59.7
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 6.9e-88 328.2 252 66.3
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 6.4e-86 321.6 275 64.4
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 1.4e-85 320.5 224 69.6
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 4.2e-85 318.9 347 51.9
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.8e-75 287.0 277 53.1
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 9.3e-69 264.6 277 48.4
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.3e-67 260.0 189 68.3
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 6.7e-67 258.5 245 54.3
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 2.5e-66 256.5 274 50.0
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 1.5e-63 247.3 198 63.1
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 6.7e-59 231.9 273 46.9
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 4.4e-58 229.2 148 75.0
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.0e-51 206.5 129 76.7
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.0e-46 191.4 282 40.1
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 6.3e-41 172.2 104 76.9
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.7e-33 146.4 85 88.2
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.1e-32 144.8 85 88.2
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.2e-29 132.9 80 86.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 2.1e-20 104.0 76 69.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.0e-19 99.8 65 70.8
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.5e-18 97.8 64 71.9
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 7.8e-15 85.5 261 28.7
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 1.9e-08 64.3 36 83.3
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 6.0e-07 59.3 35 77.1
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 6.0e-07 59.3 160 35.6


User provided reference genes

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