Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 2.5e-62 242.3 156 100.0
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.9e-41 172.9 115 79.1
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 5.5e-41 171.4 153 81.7
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 5.0e-34 148.3 115 69.6
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 8.2e-29 131.0 113 65.5
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 1.1e-28 130.6 114 60.5
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 1.1e-28 130.6 154 66.2
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 1.1e-28 130.6 114 57.0
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.4e-28 130.2 119 57.1
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 4.1e-28 128.6 114 57.9
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 1.5e-27 126.7 162 63.0
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 1.3e-26 123.6 114 56.1
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.7e-26 123.2 115 58.3
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 6.5e-26 121.3 118 54.2
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 1.1e-25 120.6 119 54.6
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 2.5e-25 119.4 161 59.6
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.2e-25 119.0 121 54.5
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.2e-25 117.9 121 54.5
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 7.2e-25 117.9 116 55.2
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.4e-25 117.5 121 54.5
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.2e-24 117.1 121 52.1
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.6e-24 116.7 121 53.7
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.6e-24 116.7 121 53.7
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.6e-24 116.7 121 52.1
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 2.1e-24 116.3 120 54.2
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.1e-24 116.3 121 53.7
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.7e-24 115.9 121 52.9
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 3.6e-24 115.5 114 53.5
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 7.9e-24 114.4 170 60.0
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 1.0e-23 114.0 116 56.0
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 1.4e-23 113.6 123 54.5
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 2.3e-23 112.8 122 53.3
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 3.0e-23 112.5 111 53.2
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.9e-23 112.1 121 51.2
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.9e-23 112.1 121 52.1
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 5.1e-23 111.7 109 58.7
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 6.7e-23 111.3 119 51.3
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 1.1e-22 110.5 124 52.4
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 2.0e-22 109.8 115 51.3
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 2.0e-22 109.8 119 49.6
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 2.0e-22 109.8 120 50.8
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 2.0e-22 109.8 123 52.8
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 3.3e-22 109.0 116 52.6
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 3.3e-22 109.0 120 50.0
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 4.4e-22 108.6 107 56.1
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 4.4e-22 108.6 121 52.1
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 1.3e-21 107.1 115 50.4
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.7e-21 106.7 118 49.2
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.8e-21 105.9 113 55.8
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 3.7e-21 105.5 113 53.1
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 3.7e-21 105.5 110 50.9
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 3.7e-21 105.5 86 55.8
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 4.8e-21 105.1 113 53.1
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 6.3e-21 104.8 116 50.0
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 8.2e-21 104.4 79 62.0
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 8.2e-21 104.4 114 50.0
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 3.1e-20 102.4 120 50.0
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.5e-19 100.1 118 45.8
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 2.0e-19 99.8 125 44.8
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 2.0e-19 99.8 119 49.6
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 2.6e-19 99.4 120 47.5
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 5.9e-19 98.2 119 43.7
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.9e-19 98.2 90 53.3
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 1.3e-18 97.1 83 55.4
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.3e-18 97.1 125 41.6
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.7e-18 96.7 124 42.7
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 1.7e-18 96.7 101 49.5
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 2.2e-18 96.3 120 47.5
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 2.9e-18 95.9 125 42.4
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 2.9e-18 95.9 110 50.9
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 5.0e-18 95.1 118 47.5
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 8.5e-18 94.4 77 57.1
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 1.1e-17 94.0 124 40.3
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.4e-17 93.6 104 50.0
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 2.5e-17 92.8 123 40.7
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 2.5e-17 92.8 123 41.5
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 2.5e-17 92.8 113 49.6
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 3.2e-17 92.4 123 41.5
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 4.2e-17 92.0 123 43.1
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 7.2e-17 91.3 109 49.5
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 9.4e-17 90.9 114 48.2
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.7e-16 89.4 121 39.7
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 2.7e-16 89.4 113 45.1
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 6.1e-16 88.2 72 56.9
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 8.0e-16 87.8 122 38.5
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 1.0e-15 87.4 123 40.7
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 1.0e-15 87.4 123 40.7
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 1.0e-15 87.4 123 40.7
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.0e-15 87.4 116 45.7
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.4e-15 87.0 122 38.5
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 1.8e-15 86.7 70 55.7
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 3.9e-15 85.5 55 60.0
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.9e-15 85.5 114 42.1
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 6.7e-15 84.7 101 42.6
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 3.3e-14 82.4 117 40.2
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 7.4e-14 81.3 119 44.5
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 3.7e-13 79.0 66 56.1
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 3.7e-13 79.0 123 38.2
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 1.8e-12 76.6 105 40.0
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 7.0e-12 74.7 103 39.8
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 2.5e-09 66.2 121 36.4
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 3.2e-09 65.9 69 47.8
AL8G30610 Arabidopsis lyrata HOM05D004357 ORTHO05D005064 2.0e-06 56.6 125 32.0
HPP92_020058 Vanilla planifolia HOM05D003240 ORTHO05D009426 2.6e-06 56.2 106 61.3


User provided reference genes

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