Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0103100 Salix brachista HOM05D002958 ORTHO05D003558 2.2e-111 405.6 197 100.0
Potri.001G399000 Populus trichocarpa HOM05D002958 ORTHO05D003558 3.6e-66 255.4 239 60.3
Potri.011G118066 Populus trichocarpa HOM05D002958 ORTHO05D003558 3.2e-62 242.3 145 84.8
Sabra16G0261600 Salix brachista HOM05D002958 ORTHO05D003558 5.4e-62 241.5 230 60.4
Manes.15G087800 Manihot esculenta HOM05D002958 ORTHO05D003558 1.0e-60 237.3 237 57.0
Manes.03G109300 Manihot esculenta HOM05D002958 ORTHO05D003558 2.5e-59 232.6 238 56.3
TWI39G0621 Tripterygium wilfordii HOM05D002958 ORTHO05D003558 5.3e-57 224.9 237 53.2
Cpa.g.sc80.76 Carica papaya HOM05D002958 ORTHO05D003558 1.9e-54 216.5 212 55.7
Cfa020573 Carpinus fangiana HOM05D002958 ORTHO05D003558 5.4e-54 214.9 236 52.5
PGR083G2586 Punica granatum HOM05D002958 ORTHO05D003558 5.4e-54 214.9 214 55.1
TWI14G0888 Tripterygium wilfordii HOM05D002958 ORTHO05D003558 5.4e-54 214.9 237 51.9
Ciclev10007808m.g Citrus clementina HOM05D002958 ORTHO05D003558 7.1e-54 214.5 227 52.0
CiPaw.12G119100 Carya illinoinensis HOM05D002958 ORTHO05D003558 9.3e-54 214.2 239 51.9
CiPaw.11G170500 Carya illinoinensis HOM05D002958 ORTHO05D003558 1.2e-53 213.8 236 52.5
Atru.chr2.2483 Acer truncatum HOM05D002958 ORTHO05D003558 2.7e-53 212.6 234 50.4
Duzib213G1007 Durio zibethinus HOM05D002958 ORTHO05D003558 2.7e-53 212.6 232 51.3
MD03G1229100 Malus domestica HOM05D002958 ORTHO05D003558 7.9e-53 211.1 192 56.2
COL.COLO4_27183 Corchorus olitorius HOM05D002958 ORTHO05D003558 1.8e-52 209.9 236 49.2
Glyma.06G240100 Glycine max HOM05D002958 ORTHO05D003558 1.8e-52 209.9 223 52.0
Thecc.07G091600 Theobroma cacao HOM05D002958 ORTHO05D003558 1.8e-52 209.9 210 54.3
Gohir.D13G152056 Gossypium hirsutum HOM05D002958 ORTHO05D003558 6.7e-52 208.0 193 55.4
Duzib170G0760 Durio zibethinus HOM05D002958 ORTHO05D003558 1.5e-51 206.8 218 51.8
Nn8g39708 Nelumbo nucifera HOM05D002958 ORTHO05D003558 1.5e-51 206.8 218 49.5
QL08p022191 Quercus lobata HOM05D002958 ORTHO05D003558 1.9e-51 206.5 236 51.3
Gohir.D01G049400 Gossypium hirsutum HOM05D002958 ORTHO05D003558 2.5e-51 206.1 192 57.3
Gorai.002G069300 Gossypium raimondii HOM05D002958 ORTHO05D003558 2.5e-51 206.1 192 57.3
Lj3g0001420 Lotus japonicus HOM05D002958 ORTHO05D003558 2.5e-51 206.1 206 54.9
Lalb_Chr01g0016791 Lupinus albus HOM05D002958 ORTHO05D003558 2.5e-51 206.1 192 56.8
FAN21G2785 Fragaria x ananassa HOM05D002958 ORTHO05D003558 3.3e-51 205.7 218 50.9
MBI07_g30198_MAGBIO Magnolia biondii HOM05D002958 ORTHO05D003558 4.3e-51 205.3 222 49.5
Haze_09438 Corylus avellana HOM05D002958 ORTHO05D003558 5.6e-51 204.9 245 50.2
VMungo1080G0249 Vigna mungo HOM05D002958 ORTHO05D003558 5.6e-51 204.9 200 55.0
Nitab4.5_0002383g0020 Nicotiana tabacum HOM05D002958 ORTHO05D003558 9.6e-51 204.1 238 48.7
RcHm_v2.0_Chr5g0033201 Rosa chinensis HOM05D002958 ORTHO05D003558 9.6e-51 204.1 218 50.5
GSVIVG01014315001 Vitis vinifera HOM05D002958 ORTHO05D003558 1.3e-50 203.8 218 52.3
arahy.Tifrunner.gnm1.ann1.VQ4NRX Arachis hypogaea HOM05D002958 ORTHO05D003558 1.6e-50 203.4 210 53.8
FvH4_3g19790 Fragaria vesca HOM05D002958 ORTHO05D003558 2.8e-50 202.6 218 50.0
Dinv20183 Davidia involucrata HOM05D002958 ORTHO05D003558 3.7e-50 202.2 238 47.9
Gohir.A01G063000 Gossypium hirsutum HOM05D002958 ORTHO05D003558 3.7e-50 202.2 192 56.8
arahy.Tifrunner.gnm1.ann1.CK6KU2 Arachis hypogaea HOM05D002958 ORTHO05D003558 6.2e-50 201.4 210 53.3
Glyma.12G225300 Glycine max HOM05D002958 ORTHO05D003558 6.2e-50 201.4 200 53.5
TAR627G0778 Trochodendron aralioides HOM05D002958 ORTHO05D003558 6.2e-50 201.4 233 50.2
CANSAT56G4387 Cannabis sativa HOM05D002958 ORTHO05D003558 8.1e-50 201.1 237 47.3
Oeu024907.2 Olea europaea HOM05D002958 ORTHO05D003558 8.1e-50 201.1 238 47.9
Phvul.005G072900 Phaseolus vulgaris HOM05D002958 ORTHO05D003558 8.1e-50 201.1 200 54.0
Cc05_g11940 Coffea canephora HOM05D002958 ORTHO05D003558 1.1e-49 200.7 236 49.2
Aa31LG3G10080 Aethionema arabicum HOM05D002958 ORTHO05D003558 1.4e-49 200.3 224 48.2
Carub.0008s1414 Capsella rubella HOM05D002958 ORTHO05D003558 1.8e-49 199.9 232 47.4
Medtr2g079110 Medicago truncatula HOM05D002958 ORTHO05D003558 2.4e-49 199.5 203 53.7
TAR627G0954 Trochodendron aralioides HOM05D002958 ORTHO05D003558 3.1e-49 199.1 232 49.6
AUR62019437 Chenopodium quinoa HOM05D002958 ORTHO05D003558 4.0e-49 198.7 237 46.8
CAN.G162.50 Capsicum annuum HOM05D002958 ORTHO05D003558 5.3e-49 198.4 211 51.7
AT5G53850 Arabidopsis thaliana HOM05D002958 ORTHO05D003558 6.9e-49 198.0 232 47.0
Lsat_1_v5_gn_7_104120 Lactuca sativa HOM05D002958 ORTHO05D003558 6.9e-49 198.0 194 54.6
MD11G1249900 Malus domestica HOM05D002958 ORTHO05D003558 6.9e-49 198.0 212 50.9
BcaC04g20412 Brassica carinata HOM05D002958 ORTHO05D003558 9.0e-49 197.6 217 47.9
CSS0016776 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 9.0e-49 197.6 231 49.8
CSS0042025 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 9.0e-49 197.6 237 48.9
Glyma.13G276000 Glycine max HOM05D002958 ORTHO05D003558 1.2e-48 197.2 200 52.5
Sed0013988 Sechium edule HOM05D002958 ORTHO05D003558 1.2e-48 197.2 234 47.9
Rhsim04G0021800 Rhododendron simsii HOM05D002958 ORTHO05D003558 2.0e-48 196.4 219 49.8
Sp6g15910 Schrenkiella parvula HOM05D002958 ORTHO05D003558 2.0e-48 196.4 217 47.9
DCAR_020992 Daucus carota HOM05D002958 ORTHO05D003558 2.6e-48 196.1 205 53.7
Hma1.2p1_0458F.1_g157030 Hydrangea macrophylla HOM05D002958 ORTHO05D003558 2.6e-48 196.1 238 49.2
Ah.04g164780 Amaranthus hybridus HOM05D002958 ORTHO05D003558 3.4e-48 195.7 211 49.3
ATR0737G076 Amborella trichopoda HOM05D002958 ORTHO05D003558 3.4e-48 195.7 218 47.7
PGSC0003DMG400012412 Solanum tuberosum HOM05D002958 ORTHO05D003558 4.5e-48 195.3 211 51.2
CDE02G0813 Ceratophyllum demersum HOM05D002958 ORTHO05D003558 5.8e-48 194.9 226 46.9
BcaB08g35744 Brassica carinata HOM05D002958 ORTHO05D003558 7.6e-48 194.5 217 47.5
A02p10810 Brassica napus HOM05D002958 ORTHO05D003558 1.0e-47 194.1 217 47.9
Nitab4.5_0000207g0070 Nicotiana tabacum HOM05D002958 ORTHO05D003558 1.0e-47 194.1 238 47.1
SalBow7G2893 Salvia bowleyana HOM05D002958 ORTHO05D003558 1.0e-47 194.1 232 46.6
BcaC03g14381 Brassica carinata HOM05D002958 ORTHO05D003558 1.3e-47 193.7 217 47.9
MELO3C016693.2 Cucumis melo HOM05D002958 ORTHO05D003558 1.7e-47 193.4 226 48.7
Oeu051071.1 Olea europaea HOM05D002958 ORTHO05D003558 1.7e-47 193.4 212 50.5
PSO541G2422 Papaver somniferum HOM05D002958 ORTHO05D003558 1.7e-47 193.4 200 51.5
PSO675G8275 Papaver somniferum HOM05D002958 ORTHO05D003558 1.7e-47 193.4 205 50.7
C02p17920 Brassica napus HOM05D002958 ORTHO05D003558 2.2e-47 193.0 217 47.5
CsaV3_4G033640 Cucumis sativus L. HOM05D002958 ORTHO05D003558 2.2e-47 193.0 211 48.8
Actinidia18769 Actinidia chinensis HOM05D002958 ORTHO05D003558 2.9e-47 192.6 237 46.4
BcaB05g22079 Brassica carinata HOM05D002958 ORTHO05D003558 3.8e-47 192.2 217 47.9
MSTRG.15237 Avicennia marina HOM05D002958 ORTHO05D003558 6.5e-47 191.4 212 51.4
FAN11G0087 Fragaria x ananassa HOM05D002958 ORTHO05D003558 1.1e-46 190.7 238 45.8
FAN16G0300 Fragaria x ananassa HOM05D002958 ORTHO05D003558 1.1e-46 190.7 238 45.8
Sopen07g031230 Solanum pennellii HOM05D002958 ORTHO05D003558 1.1e-46 190.7 205 49.8
FAN25G2067 Fragaria x ananassa HOM05D002958 ORTHO05D003558 1.4e-46 190.3 238 45.4
SGA_v2.0_scaffold73G24254 Striga asiatica HOM05D002958 ORTHO05D003558 1.4e-46 190.3 264 43.6
CARHR266980 Cardamine hirsuta HOM05D002958 ORTHO05D003558 2.5e-46 189.5 233 45.5
Dinv13400 Davidia involucrata HOM05D002958 ORTHO05D003558 2.5e-46 189.5 212 50.5
Solyc07g063040.3 Solanum lycopersicum HOM05D002958 ORTHO05D003558 2.5e-46 189.5 205 49.3
HanXRQChr09g0270181 Helianthus annuus HOM05D002958 ORTHO05D003558 3.2e-46 189.1 194 53.6
unitig_578.g15672 Utricularia gibba HOM05D002958 ORTHO05D003558 3.2e-46 189.1 192 51.0
Thhalv10013244m.g Eutrema salsugineum HOM05D002958 ORTHO05D003558 4.2e-46 188.7 233 45.1
Nitab4.5_0001336g0100 Nicotiana tabacum HOM05D002958 ORTHO05D003558 4.2e-46 188.7 231 47.2
CSS0011837 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 5.5e-46 188.3 229 46.3
AL8G28910 Arabidopsis lyrata HOM05D002958 ORTHO05D003558 7.1e-46 188.0 233 44.6
BraA10t43217Z Brassica rapa HOM05D002958 ORTHO05D003558 9.3e-46 187.6 233 44.6
THA.LOC104799927 Tarenaya hassleriana HOM05D002958 ORTHO05D003558 9.3e-46 187.6 250 43.2
A10p11240 Brassica napus HOM05D002958 ORTHO05D003558 1.2e-45 187.2 233 44.6
C09p43840 Brassica napus HOM05D002958 ORTHO05D003558 1.2e-45 187.2 233 44.6
BolC9t57268H Brassica oleracea HOM05D002958 ORTHO05D003558 1.2e-45 187.2 233 44.6
Hma1.2p1_0002F.1_g002040 Hydrangea macrophylla HOM05D002958 ORTHO05D003558 1.2e-45 187.2 193 50.3
Nitab4.5_0001241g0080 Nicotiana tabacum HOM05D002958 ORTHO05D003558 1.6e-45 186.8 218 47.2
vmacro09527 Vaccinium macrocarpon HOM05D002958 ORTHO05D003558 2.1e-45 186.4 239 45.2
BraA02t06142Z Brassica rapa HOM05D002958 ORTHO05D003558 4.6e-45 185.3 223 46.2
Migut.M00798 Erythranthe guttata HOM05D002958 ORTHO05D003558 4.6e-45 185.3 238 45.0
Mapoly0003s0138 Marchantia polymorpha HOM05D002958 ORTHO05D003558 4.6e-45 185.3 191 51.3
ECA236G4656 Erigeron canadensis HOM05D002958 ORTHO05D003558 1.0e-44 184.1 231 46.3
Hma1.2p1_2752F.1_g327880 Hydrangea macrophylla HOM05D002958 ORTHO05D003558 1.8e-44 183.3 145 65.5
BolC2t07923H Brassica oleracea HOM05D002958 ORTHO05D003558 3.9e-44 182.2 233 44.6
Aqoxy4G00736 Aquilegia oxysepala HOM05D002958 ORTHO05D003558 5.1e-44 181.8 194 50.5
Manes.13G144832 Manihot esculenta HOM05D002958 ORTHO05D003558 5.1e-44 181.8 218 45.4
AUR62039195 Chenopodium quinoa HOM05D002958 ORTHO05D003558 8.7e-44 181.0 228 46.1
Lj8C110T8 Lonicera japonica HOM05D002958 ORTHO05D003558 2.5e-43 179.5 212 47.6
GSVIVG01020566001 Vitis vinifera HOM05D002958 ORTHO05D003558 2.5e-43 179.5 220 43.6
Eucgr.F03307 Eucalyptus grandis HOM05D002958 ORTHO05D003558 1.3e-42 177.2 219 44.3
SHI21536 Sapria himalayana HOM05D002958 ORTHO05D003558 1.3e-42 177.2 198 48.5
Os11g0484000 Oryza sativa ssp. japonica HOM05D002958 ORTHO05D003558 2.1e-42 176.4 226 43.4
Actinidia13022 Actinidia chinensis HOM05D002958 ORTHO05D003558 9.0e-41 171.0 208 45.7
DCAR_013024 Daucus carota HOM05D002958 ORTHO05D003558 1.5e-40 170.2 192 45.8
AagrBONN_evm.TU.Sc2ySwM_368.412 Anthoceros agrestis HOM05D002958 ORTHO05D003558 5.8e-40 168.3 184 47.8
MBI06_g23079_MAGBIO Magnolia biondii HOM05D002958 ORTHO05D003558 7.6e-40 167.9 124 62.1
Thecc.02G181900 Theobroma cacao HOM05D002958 ORTHO05D003558 7.6e-40 167.9 218 41.3
ClCG11G018020 Citrullus lanatus HOM05D002958 ORTHO05D003558 3.8e-39 165.6 236 41.9
Zm00001eb169620 Zea mays HOM05D002958 ORTHO05D003558 3.8e-39 165.6 207 42.5
MSTRG.6831 Avicennia marina HOM05D002958 ORTHO05D003558 8.4e-39 164.5 142 57.0
Cc05_g07360 Coffea canephora HOM05D002958 ORTHO05D003558 2.5e-38 162.9 184 44.6
Cc05_g07390 Coffea canephora HOM05D002958 ORTHO05D003558 2.5e-38 162.9 188 43.6
SMO356G0618 Selaginella moellendorffii HOM05D002958 ORTHO05D003558 2.5e-38 162.9 184 45.1
Pp3c3_4430 Physcomitrium patens HOM05D002958 ORTHO05D003558 1.2e-37 160.6 183 45.4
Ca_03507_v3 Cicer arietinum L. HOM05D002958 ORTHO05D003558 5.7e-35 151.8 200 44.0
TAR624G0404 Trochodendron aralioides HOM05D002958 ORTHO05D003558 1.3e-34 150.6 106 65.1
Lj8C155G9 Lonicera japonica HOM05D002958 ORTHO05D003558 3.1e-33 146.0 236 42.8
EL10Ac4g08198 Beta vulgaris HOM05D002958 ORTHO05D003558 5.3e-33 145.2 238 38.7
SalBow4G1525 Salvia bowleyana HOM05D002958 ORTHO05D003558 1.2e-32 144.1 120 58.3
MBI06_g20686_MAGBIO Magnolia biondii HOM05D002958 ORTHO05D003558 1.5e-32 143.7 123 55.3
Peaxi162Scf00069g01630 Petunia axillaris HOM05D002958 ORTHO05D003558 2.0e-32 143.3 226 38.9
Cc03_g12040 Coffea canephora HOM05D002958 ORTHO05D003558 2.6e-32 142.9 181 41.4
CSS0039562 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 1.3e-31 140.6 125 58.4
CSS0047160 Camellia sinensis var. sinensis HOM05D002958 ORTHO05D003558 1.3e-31 140.6 125 58.4
MELO3C019407.2 Cucumis melo HOM05D002958 ORTHO05D003558 1.4e-28 130.6 142 50.7
Cre01.g016528 Chlamydomonas reinhardtii HOM05D002958 ORTHO05D003558 3.9e-28 129.0 184 37.0
CsaV3_3G019470 Cucumis sativus L. HOM05D002958 ORTHO05D003558 3.7e-26 122.5 125 52.8
QL08p039572 Quercus lobata HOM05D002958 ORTHO05D003558 1.2e-24 117.5 98 53.1
Gorai.013G169100 Gossypium raimondii HOM05D002958 ORTHO05D003558 1.7e-23 113.6 140 45.7
TPR.G7973 Trifolium pratense HOM05D002958 ORTHO05D003558 2.2e-23 113.2 128 50.8
Sc16g0007030 Simmondsia chinensis HOM05D002958 ORTHO05D003558 1.4e-22 110.5 161 41.0
ClCG05G009310 Citrullus lanatus HOM05D002958 ORTHO05D003558 5.5e-22 108.6 134 50.0
Gohir.A02G098700 Gossypium hirsutum HOM05D002958 ORTHO05D003558 7.2e-22 108.2 128 49.2
Gohir.A13G147033 Gossypium hirsutum HOM05D002958 ORTHO05D003558 3.6e-21 105.9 140 45.0
CBR_g20444 Chara braunii HOM05D002958 ORTHO05D003558 2.3e-20 103.2 96 51.0
Actinidia11088 Actinidia chinensis HOM05D002958 ORTHO05D003558 4.4e-19 99.0 71 66.2
Cfa014633 Carpinus fangiana HOM05D002958 ORTHO05D003558 3.1e-17 92.8 134 39.6
Actinidia09690 Actinidia chinensis HOM05D002958 ORTHO05D003558 1.5e-16 90.5 107 48.6
Gorai.013G170700 Gossypium raimondii HOM05D002958 ORTHO05D003558 1.7e-15 87.0 92 51.1
Gohir.D13G151100 Gossypium hirsutum HOM05D002958 ORTHO05D003558 1.1e-14 84.3 92 50.0
Eucgr.F01149 Eucalyptus grandis HOM05D002958 ORTHO05D003558 1.5e-14 84.0 117 39.3
Lalb_Chr20g0109591 Lupinus albus HOM05D002958 ORTHO05D029259 1.5e-14 84.0 60 61.7
Cpa.g.sc83.52 Carica papaya HOM05D002958 ORTHO05D003558 2.1e-13 80.1 154 35.7
Duzib187G0289 Durio zibethinus HOM05D002958 ORTHO05D029259 2.3e-12 76.6 76 53.9
PGSC0003DMG400025041 Solanum tuberosum HOM05D002958 ORTHO05D003558 2.3e-12 76.6 71 56.3
Haze_13197 Corylus avellana HOM05D002958 ORTHO05D003558 1.1e-11 74.3 138 34.1
Ciclev10009308m.g Citrus clementina HOM05D002958 ORTHO05D003558 5.7e-11 72.0 121 38.8
Gohir.A13G146200 Gossypium hirsutum HOM05D002958 ORTHO05D003558 9.7e-11 71.2 54 59.3
HanXRQChr05g0153011 Helianthus annuus HOM05D002958 ORTHO05D029259 2.8e-10 69.7 57 61.4
Cfa022318 Carpinus fangiana HOM05D002958 ORTHO05D003558 3.7e-10 69.3 135 34.1
HanXRQChr01g0015321 Helianthus annuus HOM05D002958 ORTHO05D029259 3.7e-10 69.3 57 61.4
vmacro11871 Vaccinium macrocarpon HOM05D002958 ORTHO05D003558 3.1e-09 66.2 155 32.3
Rhsim06G0199700 Rhododendron simsii HOM05D002958 ORTHO05D003558 9.1e-09 64.7 105 38.1
Peaxi162Scf00027g00211 Petunia axillaris HOM05D002958 ORTHO05D003558 5.0e-07 58.9 66 51.5
Actinidia35245 Actinidia chinensis HOM05D002958 ORTHO05D003558 8.5e-07 58.2 61 52.5
Lsat_1_v5_gn_9_97501 Lactuca sativa HOM05D002958 ORTHO05D003558 2.5e-06 56.6 36 69.4


User provided reference genes

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