Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 9.6e-33 142.9 72 100.0
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 1.3e-29 132.5 72 91.7
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 1.6e-16 89.0 65 66.2
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 2.8e-16 88.2 68 66.2
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 1.8e-15 85.5 64 62.5
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 1.8e-15 85.5 64 59.4
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 2.4e-15 85.1 70 62.9
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 1.5e-14 82.4 53 71.7
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 3.4e-14 81.3 56 71.4
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 4.5e-14 80.9 44 81.8
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 5.9e-14 80.5 73 58.9
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 5.9e-14 80.5 63 60.3
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 5.9e-14 80.5 70 58.6
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 7.7e-14 80.1 64 56.2
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 7.7e-14 80.1 72 63.9
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 1.0e-13 79.7 72 58.3
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 1.0e-13 79.7 67 55.2
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 1.0e-13 79.7 72 59.7
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 3.8e-13 77.8 72 59.7
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 3.8e-13 77.8 75 54.7
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 5.0e-13 77.4 56 67.9
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 6.5e-13 77.0 66 53.0
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 6.5e-13 77.0 77 54.5
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 6.5e-13 77.0 75 61.3
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 1.4e-12 75.9 71 56.3
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 1.4e-12 75.9 76 55.3
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 1.4e-12 75.9 70 57.1
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 1.9e-12 75.5 68 52.9
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 2.5e-12 75.1 68 54.4
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 3.2e-12 74.7 73 58.9
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 4.2e-12 74.3 68 52.9
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 4.2e-12 74.3 73 60.3
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 4.2e-12 74.3 68 55.9
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 5.5e-12 73.9 70 55.7
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 5.5e-12 73.9 74 58.1
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 7.2e-12 73.6 56 66.1
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 1.2e-11 72.8 54 68.5
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 1.2e-11 72.8 54 68.5
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 1.2e-11 72.8 54 68.5
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 1.6e-11 72.4 72 55.6
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 2.1e-11 72.0 51 66.7
COL.COLO4_17536 Corchorus olitorius HOM05D008148 ORTHO05D010295 4.6e-11 70.9 54 68.5
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 4.6e-11 70.9 74 51.4
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 6.1e-11 70.5 69 56.5
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 1.4e-10 69.3 44 65.9
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 3.9e-10 67.8 67 49.3
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 6.7e-10 67.0 67 49.3
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 1.1e-09 66.2 59 61.0
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 1.5e-09 65.9 72 45.8
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 1.5e-09 65.9 61 55.7
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 2.0e-09 65.5 73 52.1
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 2.0e-09 65.5 49 63.3
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 2.5e-09 65.1 42 66.7
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 3.3e-09 64.7 45 60.0
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 5.7e-09 63.9 50 62.0
SGA_v2.0_scaffold34G13787 Striga asiatica HOM05D008148 ORTHO05D010295 7.4e-09 63.5 38 71.1
Atru.chr1.2298 Acer truncatum HOM05D008148 ORTHO05D010295 9.7e-09 63.2 60 51.7
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 2.2e-08 62.0 46 58.7
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 2.8e-08 61.6 48 62.5
SHI27618 Sapria himalayana HOM05D008148 ORTHO05D010295 3.7e-08 61.2 48 62.5
Migut.H02001 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.5e-06 55.8 39 61.5


User provided reference genes

Program Settings