Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 1.4e-151 539.7 287 100.0
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 1.2e-134 483.4 287 90.6
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 1.2e-81 307.4 296 62.2
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 2.6e-81 306.2 288 65.6
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 7.6e-81 304.7 282 63.1
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 9.9e-81 304.3 253 67.6
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 1.9e-79 300.1 287 63.1
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 1.2e-78 297.4 290 61.7
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 1.3e-77 293.9 284 65.1
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 8.2e-75 284.6 256 67.2
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 1.1e-74 284.3 288 60.8
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 1.4e-74 283.9 276 62.0
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 1.8e-74 283.5 290 59.7
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 1.2e-73 280.8 283 61.1
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 4.9e-72 275.4 282 61.0
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 8.4e-72 274.6 262 64.1
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 9.3e-71 271.2 287 61.3
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 4.6e-70 268.9 288 58.7
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 6.0e-70 268.5 277 61.0
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 6.0e-70 268.5 280 61.4
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 1.0e-69 267.7 275 60.4
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 1.3e-69 267.3 292 58.6
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 6.7e-69 265.0 288 58.7
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 8.7e-69 264.6 279 57.3
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 3.3e-68 262.7 276 58.7
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 4.3e-68 262.3 264 61.4
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 5.7e-68 261.9 293 58.0
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 5.7e-68 261.9 284 56.3
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 9.7e-68 261.2 264 60.6
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 9.7e-68 261.2 294 58.2
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 2.8e-67 259.6 264 61.4
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.7e-67 259.2 263 60.5
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 6.3e-67 258.5 283 55.1
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 2.4e-66 256.5 287 55.4
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 3.1e-66 256.1 280 56.8
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 3.1e-66 256.1 279 58.4
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 9.0e-66 254.6 296 55.7
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 9.0e-66 254.6 285 56.1
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 9.0e-66 254.6 292 56.2
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 2.0e-65 253.4 276 55.1
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 2.6e-65 253.1 246 62.2
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 4.5e-65 252.3 238 62.2
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 4.5e-65 252.3 219 64.8
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 4.5e-65 252.3 307 53.4
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 5.9e-65 251.9 287 55.7
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 1.0e-64 251.1 291 54.6
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.3e-64 250.8 279 59.9
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 1.7e-64 250.4 280 56.1
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.9e-64 249.6 285 59.6
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 2.9e-64 249.6 285 59.6
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 5.0e-64 248.8 231 59.3
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 5.0e-64 248.8 271 59.0
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 1.1e-63 247.7 261 59.8
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.4e-63 247.3 217 62.2
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 1.9e-63 246.9 219 63.9
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 1.9e-63 246.9 257 57.2
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 3.2e-63 246.1 270 58.5
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.2e-63 246.1 262 58.4
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 7.2e-63 245.0 217 62.2
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 1.2e-62 244.2 297 54.5
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 3.6e-62 242.7 275 55.6
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 4.6e-62 242.3 230 61.3
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 6.1e-62 241.9 279 55.2
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 6.1e-62 241.9 279 55.2
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 1.4e-61 240.7 217 64.1
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 1.4e-61 240.7 265 58.1
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 6.7e-61 238.4 229 61.1
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 8.8e-61 238.0 262 56.1
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 1.1e-60 237.7 291 55.3
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 3.3e-60 236.1 248 61.3
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 5.7e-60 235.3 269 56.9
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 9.7e-60 234.6 204 69.1
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 1.3e-59 234.2 264 55.7
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 1.3e-59 234.2 264 56.1
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 1.3e-59 234.2 264 55.7
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 1.3e-59 234.2 264 55.7
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 2.2e-59 233.4 264 55.3
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 3.7e-59 232.6 264 56.1
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 3.1e-58 229.6 269 54.6
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 6.9e-58 228.4 263 56.3
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 1.3e-56 224.2 274 52.6
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.4e-55 220.7 289 51.2
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 4.2e-55 219.2 212 57.5
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 4.2e-55 219.2 212 57.5
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 6.1e-54 215.3 235 57.4
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.4e-53 214.2 279 52.7
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 6.7e-53 211.8 272 53.7
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 1.5e-52 210.7 219 55.3
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 2.6e-52 209.9 201 61.7
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 3.3e-52 209.5 290 48.6
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 3.3e-52 209.5 197 66.0
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.4e-52 209.1 275 53.1
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 9.7e-52 208.0 269 52.4
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 2.8e-51 206.5 275 53.1
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 3.7e-51 206.1 287 49.1
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 4.5e-49 199.1 294 48.0
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 2.2e-48 196.8 177 66.1
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 1.4e-47 194.1 241 49.8
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.4e-45 187.6 154 65.6
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 4.4e-44 182.6 163 65.6
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.4e-42 177.6 277 48.0
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 7.0e-42 175.3 245 47.8
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 5.5e-39 165.6 284 44.0
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 1.2e-38 164.5 272 44.9
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 4.0e-37 159.5 140 66.4
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 4.4e-36 156.0 217 48.8
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 6.3e-35 152.1 287 42.2
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 1.4e-34 151.0 199 51.3
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 3.5e-33 146.4 244 42.6
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 1.7e-32 144.1 128 64.8
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 1.5e-31 141.0 198 47.5
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 2.5e-31 140.2 201 45.3
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 1.2e-30 137.9 283 40.3
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 3.0e-29 133.3 161 53.4
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 3.0e-29 133.3 161 53.4
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 1.5e-28 131.0 162 54.9
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 4.4e-28 129.4 102 69.6
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 5.4e-26 122.5 159 50.3
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 4.5e-25 119.4 126 57.1
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 1.0e-24 118.2 198 42.4
Oeu051093.1 Olea europaea HOM05D005433 ORTHO05D006675 3.3e-23 113.2 133 51.1
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 2.1e-22 110.5 234 39.7
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 4.7e-22 109.4 235 37.0
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 1.4e-21 107.8 132 49.2
BcaB01g02390 Brassica carinata HOM05D005433 ORTHO05D006675 2.3e-21 107.1 182 45.1
CARHR090080 Cardamine hirsuta HOM05D005433 ORTHO05D006675 3.4e-20 103.2 74 75.7
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 1.6e-17 94.4 71 76.1
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 7.3e-15 85.5 131 40.5
Oeu055126.1 Olea europaea HOM05D005433 ORTHO05D006675 1.4e-13 81.3 78 61.5
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 6.4e-11 72.4 194 28.9
Lsat_1_v5_gn_4_180780 Lactuca sativa HOM05D005433 ORTHO05D006675 1.9e-10 70.9 60 61.7
Lsat_1_v5_gn_5_140640 Lactuca sativa HOM05D005433 ORTHO05D006675 4.6e-09 66.2 45 66.7
Actinidia09909 Actinidia chinensis HOM05D005433 ORTHO05D006675 3.0e-08 63.5 42 81.0
C01p49410 Brassica napus HOM05D005433 ORTHO05D040690 5.0e-08 62.8 135 37.0
EL10Ac1g01129 Beta vulgaris HOM05D005433 ORTHO05D006675 4.3e-07 59.7 35 85.7
TAR629G0034 Trochodendron aralioides HOM05D005433 ORTHO05D006675 4.3e-07 59.7 80 48.8
Lalb_Chr03g0030791 Lupinus albus HOM05D005433 ORTHO05D006675 9.5e-07 58.5 94 44.7
CARHR090070 Cardamine hirsuta HOM05D005433 ORTHO05D006675 6.2e-06 55.8 76 46.1


User provided reference genes

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