Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.2e-59 233.0 120 100.0
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 3.4e-59 231.5 120 99.2
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 3.0e-55 218.4 120 95.0
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 2.5e-49 198.7 119 86.6
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.5e-46 189.5 118 83.9
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.5e-46 188.7 118 84.7
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.5e-46 188.7 118 82.2
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 3.3e-46 188.3 118 83.9
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 4.3e-46 188.0 118 81.4
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 5.7e-46 187.6 119 80.7
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.3e-45 186.4 119 80.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.7e-45 186.0 119 80.7
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 3.7e-45 184.9 118 81.4
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 3.7e-45 184.9 118 80.5
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 3.7e-45 184.9 118 80.5
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 3.7e-45 184.9 118 82.2
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 4.8e-45 184.5 118 83.1
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 4.8e-45 184.5 118 79.7
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 6.3e-45 184.1 119 79.8
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 6.3e-45 184.1 117 82.1
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 4.1e-44 181.4 118 78.8
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 5.3e-44 181.0 118 79.7
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 5.3e-44 181.0 118 80.5
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 5.3e-44 181.0 118 80.5
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 5.3e-44 181.0 118 79.7
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 6.9e-44 180.6 118 80.5
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 6.9e-44 180.6 118 78.8
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 6.9e-44 180.6 116 79.3
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 9.1e-44 180.3 118 77.1
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 2.0e-43 179.1 117 77.8
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 3.4e-43 178.3 118 79.7
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 3.4e-43 178.3 118 78.8
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 4.5e-43 177.9 118 76.3
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 5.9e-43 177.6 118 77.1
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 5.9e-43 177.6 118 80.5
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 1.0e-42 176.8 117 77.8
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.0e-42 176.8 118 76.3
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 1.3e-42 176.4 118 76.3
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.7e-42 176.0 118 76.3
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 3.8e-42 174.9 118 79.7
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 5.0e-42 174.5 118 73.7
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 5.0e-42 174.5 118 75.4
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 1.1e-41 173.3 118 74.6
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.9e-41 172.6 117 73.5
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.9e-41 172.6 115 74.8
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.9e-41 172.6 118 73.7
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 4.2e-41 171.4 117 74.4
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.2e-41 171.4 115 74.8
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 4.2e-41 171.4 118 73.7
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 5.5e-41 171.0 117 74.4
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 5.5e-41 171.0 118 76.3
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.5e-41 171.0 115 73.9
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 7.2e-41 170.6 117 72.6
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 7.2e-41 170.6 117 72.6
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 7.2e-41 170.6 117 72.6
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 7.2e-41 170.6 119 75.6
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 9.4e-41 170.2 118 75.4
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 1.2e-40 169.9 117 72.6
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.6e-40 169.5 117 73.5
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 1.6e-40 169.5 118 72.0
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.1e-40 169.1 117 71.8
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.1e-40 169.1 118 72.0
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 4.7e-40 167.9 117 71.8
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 6.1e-40 167.5 118 73.7
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 6.1e-40 167.5 117 70.9
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 7.9e-40 167.2 118 71.2
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.0e-39 166.8 135 65.2
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 2.3e-39 165.6 118 70.3
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 3.0e-39 165.2 118 73.7
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 3.0e-39 165.2 118 72.0
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 3.9e-39 164.9 118 75.4
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 3.9e-39 164.9 118 69.5
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 5.1e-39 164.5 150 62.7
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 5.1e-39 164.5 118 70.3
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.1e-38 163.3 118 74.6
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 3.3e-38 161.8 118 69.5
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 7.4e-38 160.6 116 73.3
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 9.7e-38 160.2 118 72.0
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.3e-37 159.8 118 72.0
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.3e-37 159.8 118 72.0
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 3.7e-37 158.3 115 69.6
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 5.3e-36 154.5 119 66.4
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 9.1e-36 153.7 118 65.3
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.0e-34 150.2 118 63.6
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.2e-34 149.1 107 69.2
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 5.0e-34 147.9 118 62.7
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 1.1e-33 146.7 111 64.9
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.4e-33 146.4 95 76.8
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.5e-33 144.4 112 65.2
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 5.5e-33 144.4 111 62.2
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 4.7e-32 141.4 172 48.3
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 8.0e-32 140.6 115 60.9
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.4e-30 134.0 87 81.6
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 9.7e-30 133.7 85 75.3
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 9.7e-30 133.7 86 82.6
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.1e-28 130.2 86 80.2
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.4e-28 129.8 85 82.4
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.5e-27 125.2 94 67.0
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 4.5e-27 124.8 86 74.4
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 3.8e-26 121.7 89 74.2
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.5e-25 119.8 86 75.6
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 4.2e-25 118.2 115 55.7
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 5.5e-25 117.9 81 69.1
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 9.4e-25 117.1 88 69.3
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 9.4e-25 117.1 119 48.7
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.2e-24 116.7 118 51.7
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 3.0e-23 112.1 87 64.4
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.5e-22 109.8 121 43.8
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 1.7e-21 106.3 93 61.3
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.4e-20 103.2 83 59.0
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.1e-20 102.1 115 50.4
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 3.6e-16 88.6 54 77.8
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 3.3e-09 65.5 116 39.7


User provided reference genes

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