Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 6.5e-77 290.8 164 100.0
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.4e-49 198.7 162 75.9
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.6e-25 119.4 140 49.3
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 6.4e-24 114.8 131 64.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.3e-24 114.4 152 44.1
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.4e-23 111.7 147 46.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 5.4e-23 111.7 148 45.9
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 7.1e-23 111.3 141 53.2
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.9e-20 103.2 158 46.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.6e-19 99.0 132 49.2
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 5.8e-17 91.7 135 43.0
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 7.6e-17 91.3 131 46.6
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.6e-17 91.3 138 44.9
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.3e-16 90.5 145 40.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 4.9e-16 88.6 131 42.7
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 6.4e-16 88.2 109 49.5
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.2e-15 85.5 126 45.2
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 4.2e-15 85.5 129 41.1
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.4e-15 85.1 126 46.0
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.6e-14 83.6 138 40.6
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 3.5e-14 82.4 148 42.6
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 1.0e-13 80.9 120 45.8
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.7e-13 80.1 152 36.8
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.1e-13 78.6 131 38.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 8.7e-13 77.8 120 49.2
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.5e-12 76.3 130 40.0
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 3.3e-12 75.9 130 39.2
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.8e-11 72.8 141 38.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.8e-11 72.8 143 39.2
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 3.6e-11 72.4 136 33.1
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 4.7e-11 72.0 115 40.0
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.7e-11 72.0 142 36.6
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 6.2e-11 71.6 132 34.8
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.1e-10 70.9 132 35.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.4e-10 70.5 120 38.3
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.8e-10 70.1 131 38.2
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.0e-10 68.9 142 37.3
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 4.0e-10 68.9 165 34.5
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 6.9e-10 68.2 136 36.0
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.2e-09 67.4 142 33.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.5e-09 67.0 126 35.7
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.0e-09 66.6 113 38.1
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.6e-09 66.2 155 34.2
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.6e-09 66.2 105 41.0
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 3.4e-09 65.9 134 29.9
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 4.4e-09 65.5 151 33.1
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 5.8e-09 65.1 131 33.6
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 7.6e-09 64.7 117 35.9
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 7.6e-09 64.7 127 40.2
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.3e-08 63.9 122 36.9
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.7e-08 63.5 139 34.5
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 2.2e-08 63.2 146 36.3
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.2e-08 63.2 127 35.4
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.9e-08 62.8 109 36.7
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 2.9e-08 62.8 152 30.9
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 3.8e-08 62.4 147 34.0
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 3.8e-08 62.4 150 32.0
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 3.8e-08 62.4 161 34.8
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 4.9e-08 62.0 150 32.0
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 4.9e-08 62.0 158 35.4
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.9e-08 62.0 149 36.9
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 4.9e-08 62.0 141 34.0
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 4.9e-08 62.0 140 34.3
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.1e-07 60.8 148 32.4
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.1e-07 60.8 147 34.0
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.4e-07 60.5 156 34.0
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 1.4e-07 60.5 127 34.6
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 1.9e-07 60.1 129 35.7
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 2.4e-07 59.7 149 30.9
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 2.4e-07 59.7 149 30.9
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 2.4e-07 59.7 149 30.9
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 2.4e-07 59.7 110 34.5
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 3.2e-07 59.3 124 38.7
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.2e-07 58.9 131 37.4
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 4.2e-07 58.9 132 32.6
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.2e-07 58.9 131 32.8
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.2e-07 58.9 125 37.6
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 7.1e-07 58.2 140 35.7
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 1.2e-06 57.4 127 33.1
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 1.6e-06 57.0 142 33.1
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.6e-06 57.0 96 36.5
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.6e-06 57.0 131 33.6
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.6e-06 57.0 131 34.4
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 2.1e-06 56.6 132 33.3
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 2.1e-06 56.6 132 33.3
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 2.1e-06 56.6 132 33.3
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.1e-06 56.6 120 38.3
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.7e-06 56.2 160 31.9
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 2.7e-06 56.2 132 36.4
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 2.7e-06 56.2 113 38.9
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 2.7e-06 56.2 142 35.2
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 3.5e-06 55.8 142 35.2
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 4.6e-06 55.5 120 35.0
Cpa.g.sc166.34 Carica papaya HOM05D005932 ORTHO05D006213 6.0e-06 55.1 100 42.0
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 6.0e-06 55.1 103 36.9
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 7.8e-06 54.7 150 33.3


User provided reference genes

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