Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0086500 Salix brachista HOM05D002166 ORTHO05D002634 2.1e-94 349.0 175 100.0
Potri.011G090100 Populus trichocarpa HOM05D002166 ORTHO05D002634 2.0e-60 236.1 153 81.7
Sabra16G0235500 Salix brachista HOM05D002166 ORTHO05D002634 3.3e-34 149.1 159 54.7
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 9.8e-23 110.9 187 42.2
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 7.3e-18 94.7 180 41.1
AL1G58330 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 2.8e-17 92.8 196 36.7
CiPaw.11G189200 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.4e-16 90.5 161 42.2
Cfa020346 Carpinus fangiana HOM05D002166 ORTHO05D002634 3.1e-16 89.4 151 42.4
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 3.1e-16 89.4 176 42.6
THA.LOC104817854 Tarenaya hassleriana HOM05D002166 ORTHO05D002634 3.1e-16 89.4 196 38.8
Gohir.A04G016800 Gossypium hirsutum HOM05D002166 ORTHO05D002634 6.8e-16 88.2 180 37.8
Sp1g37510 Schrenkiella parvula HOM05D002166 ORTHO05D002634 4.4e-15 85.5 194 35.1
CARHR040710 Cardamine hirsuta HOM05D002166 ORTHO05D002634 7.6e-15 84.7 194 35.1
AT1G50660 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 9.9e-15 84.3 192 35.4
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 9.9e-15 84.3 196 35.2
MD11G1218700 Malus domestica HOM05D002166 ORTHO05D002634 1.3e-14 84.0 149 43.0
TWI38G2284 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 4.9e-14 82.0 149 40.3
Gohir.A13G138300 Gossypium hirsutum HOM05D002166 ORTHO05D002634 6.4e-14 81.6 152 42.1
Gohir.D13G143100 Gossypium hirsutum HOM05D002166 ORTHO05D002634 6.4e-14 81.6 152 41.4
Cpa.g.sc97.2 Carica papaya HOM05D002166 ORTHO05D002634 1.4e-13 80.5 193 36.8
MD03G1201300 Malus domestica HOM05D002166 ORTHO05D002634 1.4e-13 80.5 149 41.6
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 1.9e-13 80.1 172 39.0
Gorai.013G160000 Gossypium raimondii HOM05D002166 ORTHO05D002634 4.1e-13 79.0 152 40.8
Gohir.D05G369400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 5.4e-13 78.6 170 36.5
Gorai.009G438100 Gossypium raimondii HOM05D002166 ORTHO05D002634 5.4e-13 78.6 170 35.9
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 1.2e-12 77.4 148 35.8
CiPaw.12G129600 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.6e-12 77.0 144 40.3
Duzib213G0813 Durio zibethinus HOM05D002166 ORTHO05D002634 1.6e-12 77.0 179 38.5
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 1.6e-12 77.0 142 43.0
Sed0003386 Sechium edule HOM05D002166 ORTHO05D002634 2.1e-12 76.6 152 38.8
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 4.6e-12 75.5 179 38.5
Sed0016610 Sechium edule HOM05D002166 ORTHO05D002634 4.6e-12 75.5 153 35.3
ClCG09G010790 Citrullus lanatus HOM05D002166 ORTHO05D002634 6.0e-12 75.1 154 35.7
FAN11G2830 Fragaria x ananassa HOM05D002166 ORTHO05D002634 6.0e-12 75.1 154 39.6
Hma1.2p1_3160F.1_g333440 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 6.0e-12 75.1 154 40.9
arahy.Tifrunner.gnm1.ann1.2WUV3V Arachis hypogaea HOM05D002166 ORTHO05D002634 1.3e-11 73.9 179 38.0
ClCG10G005330 Citrullus lanatus HOM05D002166 ORTHO05D002634 1.7e-11 73.6 152 36.8
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 1.7e-11 73.6 188 34.6
Thecc.07G037300 Theobroma cacao HOM05D002166 ORTHO05D002634 2.3e-11 73.2 181 34.3
FAN16G1047 Fragaria x ananassa HOM05D002166 ORTHO05D002634 3.0e-11 72.8 153 39.9
Glyma.18G097100 Glycine max HOM05D002166 ORTHO05D002634 3.0e-11 72.8 166 34.9
Hma1.2p1_2464F.1_g322600 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 3.0e-11 72.8 154 40.3
Carub.0001s3970 Capsella rubella HOM05D002166 ORTHO05D002634 3.9e-11 72.4 196 32.7
FAN25G0402 Fragaria x ananassa HOM05D002166 ORTHO05D002634 8.6e-11 71.2 158 37.3
Hma1.2p1_0673F.1_g201340 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 8.6e-11 71.2 99 41.4
Cc05_g13700 Coffea canephora HOM05D002166 ORTHO05D002634 1.1e-10 70.9 145 37.9
FAN21G3541 Fragaria x ananassa HOM05D002166 ORTHO05D002634 1.1e-10 70.9 153 39.9
Oeu042937.1 Olea europaea HOM05D002166 ORTHO05D002634 1.1e-10 70.9 145 40.0
LjContig00272g0027317 Lotus japonicus HOM05D002166 ORTHO05D002634 1.9e-10 70.1 162 35.2
PGR083G0038 Punica granatum HOM05D002166 ORTHO05D002634 1.9e-10 70.1 146 39.0
Actinidia35343 Actinidia chinensis HOM05D002166 ORTHO05D002634 2.5e-10 69.7 165 35.8
Gohir.A11G278700 Gossypium hirsutum HOM05D002166 ORTHO05D002634 3.3e-10 69.3 142 35.9
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 4.3e-10 68.9 188 34.6
MELO3C025366.2 Cucumis melo HOM05D002166 ORTHO05D002634 4.3e-10 68.9 159 36.5
Eucgr.F00765 Eucalyptus grandis HOM05D002166 ORTHO05D002634 4.3e-10 68.9 137 42.3
Psat2g011000 Pisum sativum HOM05D002166 ORTHO05D002634 4.3e-10 68.9 129 36.4
Gohir.D11G289500 Gossypium hirsutum HOM05D002166 ORTHO05D002634 5.6e-10 68.6 149 36.9
Gorai.007G313300 Gossypium raimondii HOM05D002166 ORTHO05D002634 5.6e-10 68.6 149 36.9
CsaV3_3G005040 Cucumis sativus L. HOM05D002166 ORTHO05D002634 7.3e-10 68.2 161 36.6
RcHm_v2.0_Chr5g0039421 Rosa chinensis HOM05D002166 ORTHO05D002634 7.3e-10 68.2 176 36.4
MSTRG.15149 Avicennia marina HOM05D002166 ORTHO05D002634 1.2e-09 67.4 137 38.0
Rhsim06G0216800 Rhododendron simsii HOM05D002166 ORTHO05D002634 1.2e-09 67.4 153 35.9
BcaB07g33506 Brassica carinata HOM05D002166 ORTHO05D002634 2.8e-09 66.2 191 32.5
Glyma.02G290700 Glycine max HOM05D002166 ORTHO05D002634 2.8e-09 66.2 167 37.1
HanXRQChr08g0233861 Helianthus annuus HOM05D002166 ORTHO05D002634 2.8e-09 66.2 143 35.7
Lalb_Chr04g0248451 Lupinus albus HOM05D002166 ORTHO05D002634 2.8e-09 66.2 123 37.4
Aa31LG10G3670 Aethionema arabicum HOM05D002166 ORTHO05D002634 4.7e-09 65.5 151 40.4
Carub.0003s2030 Capsella rubella HOM05D002166 ORTHO05D002634 4.7e-09 65.5 177 35.0
A06p02960 Brassica napus HOM05D002166 ORTHO05D002634 6.2e-09 65.1 186 32.8
BraA06t23502Z Brassica rapa HOM05D002166 ORTHO05D002634 8.1e-09 64.7 187 32.6
Lsat_1_v5_gn_5_4021 Lactuca sativa HOM05D002166 ORTHO05D002634 1.1e-08 64.3 194 34.0
QL08p010329 Quercus lobata HOM05D002166 ORTHO05D002634 1.1e-08 64.3 140 36.4
TPR.G1145 Trifolium pratense HOM05D002166 ORTHO05D002634 1.1e-08 64.3 166 31.9
C06p05920 Brassica napus HOM05D002166 ORTHO05D002634 1.4e-08 63.9 186 33.3
Gohir.A01G079400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.4e-08 63.9 184 33.2
BraA05t21734Z Brassica rapa HOM05D002166 ORTHO05D002634 1.8e-08 63.5 178 36.0
VMungo0647G1741 Vigna mungo HOM05D002166 ORTHO05D002634 2.4e-08 63.2 158 38.6
BolC6t35705H Brassica oleracea HOM05D002166 ORTHO05D002634 3.1e-08 62.8 189 34.4
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 3.1e-08 62.8 151 35.8
CsaV3_7G021790 Cucumis sativus L. HOM05D002166 ORTHO05D002634 3.1e-08 62.8 158 31.6
Lalb_Chr10g0106961 Lupinus albus HOM05D002166 ORTHO05D002634 3.1e-08 62.8 123 33.3
Ca_06318_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 4.0e-08 62.4 168 33.3
Ca_30807_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 4.0e-08 62.4 168 33.3
Glyma.14G024000 Glycine max HOM05D002166 ORTHO05D002634 4.0e-08 62.4 158 39.2
Nitab4.5_0001913g0130 Nicotiana tabacum HOM05D002166 ORTHO05D002634 4.0e-08 62.4 148 37.8
COL.COLO4_09660 Corchorus olitorius HOM05D002166 ORTHO05D002634 5.2e-08 62.0 181 33.1
Gorai.002G088400 Gossypium raimondii HOM05D002166 ORTHO05D002634 6.8e-08 61.6 184 33.2
Phvul.008G267200 Phaseolus vulgaris HOM05D002166 ORTHO05D002634 6.8e-08 61.6 154 36.4
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 6.8e-08 61.6 155 34.2
BcaC08g43244 Brassica carinata HOM05D002166 ORTHO05D002634 8.9e-08 61.2 185 32.4
Lj8A169T85 Lonicera japonica HOM05D002166 ORTHO05D002634 8.9e-08 61.2 175 33.1
A05p28560 Brassica napus HOM05D002166 ORTHO05D002634 1.2e-07 60.8 152 36.2
ECA246G2514 Erigeron canadensis HOM05D002166 ORTHO05D002634 1.2e-07 60.8 198 32.8
Medtr5g092610 Medicago truncatula HOM05D002166 ORTHO05D002634 1.2e-07 60.8 173 32.4
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 1.2e-07 60.8 172 30.2
Nitab4.5_0011129g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.2e-07 60.8 148 37.2
Peaxi162Scf00964g00022 Petunia axillaris HOM05D002166 ORTHO05D002634 1.2e-07 60.8 146 34.2
Migut.H01828 Erythranthe guttata HOM05D002166 ORTHO05D002634 1.5e-07 60.5 142 38.0
Sp3g18380 Schrenkiella parvula HOM05D002166 ORTHO05D002634 2.0e-07 60.1 189 33.3
EL10Ac4g07812 Beta vulgaris HOM05D002166 ORTHO05D002634 2.6e-07 59.7 152 32.2
Aa31LG8G7170 Aethionema arabicum HOM05D002166 ORTHO05D002634 3.4e-07 59.3 76 40.8
Gohir.D01G066400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 4.4e-07 58.9 184 32.6
Lj6g0008473 Lotus japonicus HOM05D002166 ORTHO05D002634 4.4e-07 58.9 147 38.1
DCAR_022561 Daucus carota HOM05D002166 ORTHO05D002634 7.6e-07 58.2 121 43.0
MSTRG.14434 Avicennia marina HOM05D002166 ORTHO05D002634 9.9e-07 57.8 133 38.3
CARHR096000 Cardamine hirsuta HOM05D002166 ORTHO05D002634 9.9e-07 57.8 180 31.1
MSTRG.6918 Avicennia marina HOM05D002166 ORTHO05D002634 1.3e-06 57.4 139 35.3
BcaB06g26100 Brassica carinata HOM05D002166 ORTHO05D002634 3.8e-06 55.8 154 36.4
RhsimUnG0250700 Rhododendron simsii HOM05D002166 ORTHO05D002634 3.8e-06 55.8 155 31.6
AL3G34070 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 6.4e-06 55.1 175 32.6
Sopen07g032770 Solanum pennellii HOM05D002166 ORTHO05D002634 6.4e-06 55.1 141 35.5
TAR626G1818 Trochodendron aralioides HOM05D002166 ORTHO05D002634 6.4e-06 55.1 156 32.7


User provided reference genes

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