Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.0e-218 763.1 384 100.0
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 1.4e-175 619.8 352 88.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 1.8e-122 443.4 355 65.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 8.0e-118 427.9 341 64.5
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.5e-116 423.7 348 62.9
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.7e-115 419.1 349 61.9
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.4e-114 416.4 348 61.5
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 7.0e-114 414.8 348 62.9
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 9.1e-114 414.5 345 60.9
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 9.1e-114 414.5 366 61.5
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 9.1e-114 414.5 351 62.4
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 2.0e-113 413.3 351 62.1
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 4.5e-113 412.1 341 62.8
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.3e-112 410.6 356 61.5
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.7e-112 410.2 344 60.8
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 2.2e-112 409.8 346 63.0
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 3.8e-112 409.1 339 63.4
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.9e-111 406.8 354 62.1
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 2.5e-111 406.4 352 61.4
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 4.7e-110 402.1 356 60.7
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-109 401.0 355 59.7
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 3.0e-109 399.4 340 62.4
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 3.0e-109 399.4 349 60.7
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 4.0e-109 399.1 364 59.1
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 4.0e-109 399.1 348 59.2
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 5.2e-109 398.7 355 59.7
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 5.2e-109 398.7 355 59.7
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 5.2e-109 398.7 355 59.7
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 5.2e-109 398.7 355 59.7
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 1.2e-108 397.5 348 59.2
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 1.2e-108 397.5 352 59.7
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.5e-108 397.1 350 59.4
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 2.6e-108 396.4 349 59.3
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 4.4e-108 395.6 355 59.2
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 2.8e-107 392.9 348 62.1
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.7e-107 392.5 348 60.6
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 3.7e-107 392.5 337 59.9
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 8.3e-107 391.3 350 57.7
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.1e-106 391.0 349 59.6
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.8e-106 390.2 357 58.0
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 3.1e-106 389.4 357 57.1
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 4.1e-106 389.0 356 58.1
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 1.2e-105 387.5 348 59.8
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.7e-105 386.3 355 56.6
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.7e-105 386.3 350 56.6
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 7.7e-105 384.8 346 58.7
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 2.3e-104 383.3 343 56.6
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 3.8e-104 382.5 352 56.8
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.5e-103 380.6 341 58.7
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 2.5e-103 379.8 345 59.7
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 5.6e-103 378.6 342 57.9
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.2e-102 377.5 299 61.2
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.0e-101 374.4 354 56.8
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.0e-101 374.4 349 55.3
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.4e-101 374.0 341 57.5
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 8.9e-101 371.3 349 55.9
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 8.9e-101 371.3 319 58.9
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.2e-100 370.9 341 58.9
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 2.0e-100 370.2 344 57.0
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 2.6e-100 369.8 341 56.6
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 3.4e-100 369.4 339 57.8
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 4.4e-100 369.0 343 57.4
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 4.4e-100 369.0 358 56.4
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.3e-99 367.5 296 62.5
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.3e-99 367.5 343 54.8
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 2.2e-99 366.7 350 56.0
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 2.9e-99 366.3 303 59.1
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 4.9e-99 365.5 340 57.1
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 6.4e-99 365.2 344 56.1
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.1e-98 364.4 315 59.7
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 9.2e-98 361.3 303 58.1
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 4.6e-97 359.0 297 58.9
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 7.8e-97 358.2 306 59.5
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 5.0e-96 355.5 316 57.9
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 3.3e-95 352.8 310 56.8
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 9.5e-95 351.3 346 54.9
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 9.5e-95 351.3 341 55.1
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.6e-94 350.5 341 55.1
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 2.8e-94 349.7 402 50.0
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 3.6e-94 349.4 347 54.2
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.4e-93 347.4 303 58.7
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 4.0e-93 345.9 366 51.6
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 7.5e-92 341.7 370 50.3
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.0e-88 331.3 307 54.1
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 4.7e-86 322.4 265 58.9
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 8.1e-86 321.6 298 54.4
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.1e-85 321.2 268 61.2
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 3.1e-85 319.7 353 51.3
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 8.9e-85 318.2 263 59.7
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 4.4e-84 315.8 289 56.7
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 7.3e-79 298.5 264 56.1
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.6e-78 297.4 344 49.1
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.4e-77 294.3 303 51.8
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 4.0e-77 292.7 331 49.5
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.9e-75 286.6 362 45.9
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 4.9e-75 285.8 302 48.7
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 2.7e-73 280.0 266 54.1
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.4e-58 231.1 260 50.0
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 2.4e-58 230.3 259 46.7
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.1e-50 204.9 376 36.2
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.8e-46 190.3 177 55.4
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 1.2e-44 184.9 133 67.7
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 5.8e-44 182.6 220 50.0
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 8.7e-40 168.7 181 53.6
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.5e-39 167.9 140 58.6
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 5.7e-39 166.0 140 58.6
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.3e-38 164.9 140 57.1
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 3.4e-36 156.8 182 50.0
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 6.1e-33 146.0 174 47.7
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 4.8e-30 136.3 125 54.4
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.4e-21 107.5 100 54.0
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 4.1e-21 106.7 254 31.5
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 6.9e-21 105.9 87 56.3
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 7.7e-20 102.4 192 30.7
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 5.0e-11 73.2 61 59.0
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 1.5e-10 71.6 119 37.0
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 4.4e-07 60.1 56 57.1


User provided reference genes

Program Settings