Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 5.7e-115 417.5 204 100.0
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 2.2e-114 415.6 204 99.5
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 5.4e-81 304.7 191 80.6
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 7.1e-65 251.1 193 68.9
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 1.3e-53 213.8 193 60.6
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 1.6e-53 213.4 195 57.9
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 9.6e-46 187.6 192 55.2
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 1.8e-44 183.3 193 55.4
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 5.5e-41 171.8 184 51.1
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 1.2e-40 170.6 172 52.9
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 2.1e-40 169.9 183 51.4
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 3.6e-40 169.1 189 51.9
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 1.0e-39 167.5 188 51.1
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 5.1e-39 165.2 189 51.3
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 1.5e-38 163.7 192 50.0
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 2.5e-38 162.9 186 49.5
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 7.4e-38 161.4 183 50.3
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 8.2e-37 157.9 188 50.5
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 1.8e-36 156.8 165 50.9
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 5.3e-36 155.2 162 54.3
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 1.2e-35 154.1 189 46.6
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 1.5e-35 153.7 189 47.1
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.5e-35 153.7 160 51.9
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 2.6e-35 152.9 161 54.0
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 3.4e-35 152.5 191 49.7
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 4.5e-35 152.1 184 46.7
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 5.9e-35 151.8 193 47.7
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 5.9e-35 151.8 193 47.7
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.3e-34 150.6 193 47.2
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 3.8e-34 149.1 169 46.2
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 3.8e-34 149.1 194 47.4
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 3.8e-34 149.1 185 47.0
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 5.0e-34 148.7 193 47.2
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 6.5e-34 148.3 163 53.4
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 6.5e-34 148.3 169 46.7
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 1.1e-33 147.5 190 47.9
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 4.2e-33 145.6 190 45.3
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 1.6e-32 143.7 174 46.0
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 2.1e-32 143.3 189 47.1
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 1.8e-31 140.2 161 49.7
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 8.8e-31 137.9 158 49.4
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 3.3e-30 136.0 184 44.6
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 3.3e-30 136.0 182 46.7
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 4.3e-30 135.6 168 44.6
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 5.7e-30 135.2 169 44.4
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 2.8e-29 132.9 167 46.7
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 8.2e-29 131.3 187 43.3
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 5.3e-28 128.6 206 40.3
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 5.3e-28 128.6 144 48.6
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 6.9e-28 128.3 185 41.1
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 2.6e-27 126.3 184 44.0
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 2.6e-27 126.3 208 40.4
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 3.4e-27 125.9 184 41.8
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 5.9e-27 125.2 172 41.9
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 1.0e-26 124.4 216 38.0
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 1.3e-26 124.0 179 43.0
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 2.2e-26 123.2 215 38.1
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 6.5e-26 121.7 186 45.2
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 6.5e-26 121.7 164 45.7
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 8.5e-26 121.3 216 36.6
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 1.1e-25 120.9 162 45.7
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 1.1e-25 120.9 184 41.8
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 1.4e-25 120.6 170 41.2
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 5.5e-25 118.6 184 40.8
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 5.5e-25 118.6 159 45.3
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 5.5e-25 118.6 209 38.3
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 7.2e-25 118.2 169 43.2
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.2e-24 117.5 167 41.3
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 2.7e-24 116.3 159 44.7
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 2.7e-24 116.3 158 46.2
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 2.7e-24 116.3 158 44.3
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 3.6e-24 115.9 184 40.2
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 4.7e-24 115.5 159 44.0
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 4.7e-24 115.5 164 42.1
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 1.4e-23 114.0 184 40.8
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 1.8e-23 113.6 205 39.0
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.3e-23 113.2 158 42.4
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 2.3e-23 113.2 164 41.5
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 3.0e-23 112.8 153 43.1
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 5.2e-23 112.1 166 41.6
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 1.3e-21 107.5 186 39.2
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 2.8e-21 106.3 144 43.1
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 4.8e-21 105.5 165 41.8
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 8.2e-21 104.8 218 34.4
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.8e-20 103.6 162 37.7
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 4.1e-20 102.4 188 35.6
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 2.6e-19 99.8 184 37.0
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 3.5e-19 99.4 155 41.9
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 3.8e-18 95.9 173 37.0
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 2.5e-17 93.2 163 36.8
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 1.8e-15 87.0 163 37.4
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 7.5e-14 81.6 153 38.6
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 9.1e-12 74.7 103 46.6
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 2.5e-09 66.6 116 38.8
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 2.6e-06 56.6 53 47.2
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 3.4e-06 56.2 64 46.9
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 5.7e-06 55.5 33 63.6
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 5.7e-06 55.5 56 46.4


User provided reference genes

Program Settings