Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 7.5e-115 417.2 204 100.0
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 3.7e-114 414.8 204 99.5
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 1.9e-81 306.2 191 81.2
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 1.9e-65 253.1 193 69.4
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 3.3e-54 215.7 195 58.5
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 3.3e-54 215.7 193 61.1
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 2.5e-46 189.5 192 55.7
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 3.7e-45 185.7 193 56.0
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 1.4e-41 173.7 184 51.6
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 4.2e-41 172.2 183 51.9
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 7.2e-41 171.4 189 52.4
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 1.6e-40 170.2 172 52.9
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 2.1e-40 169.9 188 51.6
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 1.0e-39 167.5 189 51.9
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 5.1e-39 165.2 192 50.5
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 6.7e-39 164.9 186 50.0
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 2.5e-38 162.9 183 50.8
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 1.6e-37 160.2 188 51.1
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 1.8e-36 156.8 165 50.9
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 3.1e-36 156.0 189 47.1
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 4.1e-36 155.6 189 47.6
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 5.3e-36 155.2 162 54.3
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 1.2e-35 154.1 184 47.3
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 1.2e-35 154.1 191 50.3
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 1.5e-35 153.7 193 48.2
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.5e-35 153.7 193 48.2
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.5e-35 153.7 160 51.9
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 2.6e-35 152.9 161 54.0
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 3.4e-35 152.5 193 47.7
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 1.0e-34 151.0 194 47.9
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.0e-34 151.0 185 47.6
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.3e-34 150.6 193 47.7
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 2.2e-34 149.8 194 42.3
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 2.9e-34 149.4 190 48.4
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 5.0e-34 148.7 194 42.8
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 6.5e-34 148.3 163 53.4
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 1.1e-33 147.5 190 45.8
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 5.5e-33 145.2 189 47.6
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 1.6e-32 143.7 174 46.0
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 1.8e-31 140.2 161 49.7
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 8.8e-31 137.9 158 49.4
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 8.8e-31 137.9 184 45.1
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 8.8e-31 137.9 182 47.3
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 4.3e-30 135.6 168 44.6
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 7.4e-30 134.8 169 44.4
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 2.8e-29 132.9 167 46.7
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 8.2e-29 131.3 187 43.3
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 1.4e-28 130.6 206 40.8
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 3.1e-28 129.4 191 41.9
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 5.3e-28 128.6 184 44.6
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 5.3e-28 128.6 144 48.6
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 6.9e-28 128.3 208 40.9
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 9.1e-28 127.9 184 42.4
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 2.6e-27 126.3 216 38.4
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 5.9e-27 125.2 215 38.6
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 7.7e-27 124.8 172 41.9
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 7.7e-27 124.8 211 40.3
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 2.2e-26 123.2 184 42.4
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 2.2e-26 123.2 216 37.0
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 3.8e-26 122.5 186 45.2
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 8.5e-26 121.3 164 45.7
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 1.1e-25 120.9 209 38.8
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 1.4e-25 120.6 184 41.3
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 1.4e-25 120.6 162 45.7
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 1.9e-25 120.2 184 41.8
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 1.9e-25 120.2 170 41.2
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 7.2e-25 118.2 169 43.2
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 9.4e-25 117.9 184 41.8
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 1.2e-24 117.5 184 40.8
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 1.2e-24 117.5 184 41.8
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.2e-24 117.5 167 41.3
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 1.6e-24 117.1 184 40.8
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 2.1e-24 116.7 184 41.3
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 3.6e-24 115.9 184 41.3
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 3.6e-24 115.9 205 39.5
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 6.1e-24 115.2 164 42.1
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.3e-23 113.2 158 42.4
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 2.3e-23 113.2 164 41.5
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 3.0e-23 112.8 153 43.1
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 5.2e-23 112.1 166 41.6
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 4.4e-22 109.0 186 39.8
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 2.2e-21 106.7 218 34.9
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 2.8e-21 106.3 144 43.1
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 4.8e-21 105.5 165 41.8
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 1.1e-20 104.4 188 36.2
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.8e-20 103.6 162 37.7
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 5.3e-20 102.1 184 37.5
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 3.5e-19 99.4 155 41.9
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 1.0e-18 97.8 173 37.6
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 2.5e-17 93.2 163 36.8
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 1.8e-15 87.0 163 37.4
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 9.7e-14 81.3 153 38.6
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 1.2e-11 74.3 103 46.6
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 3.2e-09 66.2 116 38.8
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 2.0e-06 57.0 93 41.9
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 5.7e-06 55.5 51 49.0
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 5.7e-06 55.5 33 63.6
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 9.8e-06 54.7 54 48.1


User provided reference genes

Program Settings