Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 2.7e-67 258.8 164 100.0
Sabra11G0072200 Salix brachista HOM05D008051 ORTHO05D009905 2.6e-49 199.1 97 100.0
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 1.2e-35 153.7 102 75.5
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 2.1e-22 109.8 159 62.3
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 7.8e-22 107.8 159 61.6
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 1.0e-21 107.5 109 51.4
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.7e-21 106.7 159 60.4
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 1.7e-21 106.7 109 50.5
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 2.3e-21 106.3 121 69.4
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 2.3e-21 106.3 121 69.4
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 1.1e-20 104.0 76 57.9
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 1.5e-20 103.6 143 62.9
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 5.6e-20 101.7 159 59.7
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 1.2e-19 100.5 159 61.0
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 1.6e-19 100.1 109 51.4
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 3.6e-19 99.0 159 61.0
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 4.7e-19 98.6 153 58.8
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 6.2e-19 98.2 86 51.2
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 1.1e-18 97.4 109 46.8
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 1.1e-18 97.4 109 48.6
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 3.1e-18 95.9 108 46.3
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 5.2e-18 95.1 148 59.5
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 5.2e-18 95.1 100 47.0
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 8.9e-18 94.4 133 61.7
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 1.5e-17 93.6 145 60.7
Manes.15G067600 Manihot esculenta HOM05D008051 ORTHO05D009905 2.0e-17 93.2 123 45.5
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 4.4e-17 92.0 167 56.9
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 7.6e-17 91.3 103 45.6
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 7.6e-17 91.3 113 65.5
MD11G1211300 Malus domestica HOM05D008051 ORTHO05D009905 1.3e-16 90.5 106 49.1
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 8.4e-16 87.8 69 55.1
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 1.9e-15 86.7 81 48.1
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 1.9e-15 86.7 146 62.3
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 7.1e-15 84.7 76 51.3
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 1.2e-14 84.0 157 54.8
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 1.0e-13 80.9 149 53.0
Cpa.g.sc12.259 Carica papaya HOM05D008051 ORTHO05D009905 1.0e-13 80.9 97 45.4
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 1.0e-13 80.9 82 47.6
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 1.0e-13 80.9 76 46.1
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 1.3e-13 80.5 69 52.2
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 1.3e-13 80.5 76 46.1
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 5.1e-13 78.6 83 43.4
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 8.7e-13 77.8 103 35.9
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 5.6e-12 75.1 65 49.2
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 7.3e-12 74.7 91 44.0
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 9.6e-12 74.3 94 40.4
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 4.7e-11 72.0 78 48.7
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 4.7e-11 72.0 155 52.3
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 4.7e-11 72.0 107 39.3
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 1.4e-10 70.5 100 40.0
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 1.8e-10 70.1 53 52.8
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 4.0e-10 68.9 46 58.7
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 6.9e-10 68.2 103 35.9
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 4.4e-09 65.5 50 56.0
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 4.4e-09 65.5 50 56.0
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 4.4e-09 65.5 50 56.0
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 5.8e-09 65.1 99 36.4
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 7.6e-09 64.7 101 35.6
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 9.9e-09 64.3 48 47.9
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 2.2e-08 63.2 46 54.3
AL1G58320 Arabidopsis lyrata HOM05D012777 ORTHO05D009905 2.9e-08 62.8 150 50.7
Thhalv10012178m.g Eutrema salsugineum HOM05D012777 ORTHO05D009905 4.9e-08 62.0 69 46.4
AT1G50650 Arabidopsis thaliana HOM05D012777 ORTHO05D009905 1.4e-07 60.5 88 40.9
CARHR040700 Cardamine hirsuta HOM05D012777 ORTHO05D009905 2.4e-07 59.7 90 40.0
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 2.4e-07 59.7 96 34.4
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 4.2e-07 58.9 102 38.2
ClCG09G011010 Citrullus lanatus HOM05D027124 ORTHO05D029025 5.4e-07 58.5 137 52.6
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 9.3e-07 57.8 102 36.3
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 9.3e-07 57.8 101 34.7
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 9.3e-07 57.8 101 37.6
Sp1g37480 Schrenkiella parvula HOM05D012777 ORTHO05D009905 2.7e-06 56.2 56 50.0
Carub.0001s3969 Capsella rubella HOM05D012777 ORTHO05D009905 3.5e-06 55.8 99 37.4
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 3.5e-06 55.8 78 37.2
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 4.6e-06 55.5 97 38.1
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 7.8e-06 54.7 108 32.4


User provided reference genes

Program Settings