Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 1.7e-100 369.4 197 100.0
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 3.5e-77 292.0 206 80.6
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 2.1e-50 203.0 207 61.4
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 1.6e-45 186.8 201 60.2
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 4.6e-45 185.3 201 57.2
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.3e-44 183.7 203 58.1
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 1.8e-44 183.3 205 57.1
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.3e-44 183.0 203 59.6
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.1e-43 180.6 201 58.7
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 2.5e-43 179.5 210 57.6
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.8e-42 176.0 208 54.3
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 6.2e-42 174.9 213 56.3
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.4e-41 173.7 201 58.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 2.6e-40 169.5 202 56.4
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.4e-40 169.1 223 50.2
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 7.6e-40 167.9 203 53.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.7e-39 166.8 216 53.7
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.7e-39 166.8 207 53.1
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.2e-39 166.4 207 51.7
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.9e-38 163.3 219 51.6
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 3.2e-38 162.5 203 56.2
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 2.7e-37 159.5 210 52.9
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 6.1e-37 158.3 217 50.2
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 2.3e-36 156.4 223 48.4
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-35 153.3 223 48.4
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-35 153.3 213 50.2
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-35 153.3 213 50.2
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.5e-35 152.9 192 52.6
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.3e-35 152.1 223 47.5
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 7.4e-35 151.4 212 52.4
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 9.7e-35 151.0 223 48.0
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 1.6e-34 150.2 195 48.2
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 1.6e-34 150.2 221 52.5
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 1.4e-33 147.1 198 49.0
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.4e-33 146.4 207 48.8
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 5.3e-33 145.2 202 47.0
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 6.9e-33 144.8 195 52.3
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 6.9e-33 144.8 213 47.4
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.6e-32 142.9 213 47.9
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 3.4e-32 142.5 213 49.3
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 4.5e-32 142.1 198 47.5
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 7.7e-32 141.4 201 48.8
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.7e-31 140.2 203 47.8
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.2e-31 139.8 219 47.9
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 2.2e-31 139.8 199 50.3
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 5.0e-31 138.7 198 47.5
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.4e-30 137.1 192 50.0
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 3.2e-30 136.0 186 47.3
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 3.2e-30 136.0 186 47.3
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 4.2e-30 135.6 214 44.9
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.6e-29 133.7 192 47.9
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 2.1e-29 133.3 209 45.0
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 3.6e-29 132.5 199 48.7
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 3.6e-29 132.5 196 46.4
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 4.6e-29 132.1 196 46.4
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.8e-28 130.2 194 46.9
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.9e-28 129.0 215 44.2
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 5.1e-28 128.6 199 46.7
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.1e-27 127.5 181 50.8
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.1e-27 127.5 196 46.9
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.1e-27 127.5 196 48.5
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.0e-27 126.7 229 41.9
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 4.3e-27 125.6 196 44.9
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 4.8e-26 122.1 233 40.8
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 4.8e-26 122.1 204 44.6
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.1e-25 120.9 199 44.2
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 2.4e-25 119.8 219 42.9
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 9.1e-25 117.9 197 45.7
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 2.0e-24 116.7 182 47.3
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 1.7e-23 113.6 182 44.5
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 3.8e-23 112.5 165 49.1
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.8e-23 112.5 199 43.7
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 6.5e-23 111.7 184 44.0
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.1e-22 110.9 188 43.6
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.1e-22 110.9 191 45.0
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 3.2e-22 109.4 84 69.0
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 9.4e-22 107.8 202 41.1
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 9.4e-22 107.8 247 38.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.1e-21 106.7 187 45.5
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 6.1e-21 105.1 154 51.3
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.4e-20 104.0 149 53.7
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.0e-20 102.8 223 38.6
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 3.9e-20 102.4 199 40.7
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 5.1e-20 102.1 171 44.4
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 2.0e-19 100.1 189 43.9
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 9.7e-19 97.8 187 41.2
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.8e-17 93.6 209 36.4
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.0e-16 90.1 193 37.8
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.0e-15 87.8 191 38.2
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 2.9e-15 86.3 103 48.5
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 7.2e-14 81.6 79 55.7
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 9.4e-14 81.3 154 41.6
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 6.1e-13 78.6 159 42.8
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.6e-08 63.2 175 35.4


User provided reference genes

Program Settings