Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0070000 Salix brachista HOM05D006198 ORTHO05D008226 4.8e-109 397.9 207 100.0
Sabra11G0067700 Salix brachista HOM05D006198 ORTHO05D008226 1.5e-107 392.9 207 98.6
Potri.011G080300 Populus trichocarpa HOM05D006198 ORTHO05D008226 1.3e-98 363.2 206 92.7
COL.COLO4_38286 Corchorus olitorius HOM05D006198 ORTHO05D008226 1.7e-69 266.5 202 70.3
Thecc.06G152500 Theobroma cacao HOM05D006198 ORTHO05D008226 8.2e-69 264.2 201 69.2
TWI09G1426 Tripterygium wilfordii HOM05D006198 ORTHO05D008226 1.4e-68 263.5 202 69.3
TWI53G0219 Tripterygium wilfordii HOM05D006198 ORTHO05D008226 2.4e-68 262.7 203 70.9
Manes.15G120300 Manihot esculenta HOM05D006198 ORTHO05D008226 4.1e-68 261.9 203 70.0
Duzib160G0456 Durio zibethinus HOM05D006198 ORTHO05D008226 5.3e-68 261.5 202 69.3
TAR629G0041 Trochodendron aralioides HOM05D006198 ORTHO05D008226 1.6e-67 260.0 202 69.8
Atru.chr10.1313 Acer truncatum HOM05D006198 ORTHO05D008226 2.9e-66 255.8 203 65.5
Cpa.g.sc166.25 Carica papaya HOM05D006198 ORTHO05D008226 2.9e-66 255.8 202 67.3
Dinv30723 Davidia involucrata HOM05D006198 ORTHO05D008226 5.0e-66 255.0 207 69.1
Atru.chr10.1297 Acer truncatum HOM05D006198 ORTHO05D008226 1.5e-65 253.4 203 65.0
TAR629G2249 Trochodendron aralioides HOM05D006198 ORTHO05D008226 1.5e-65 253.4 202 68.3
Atru.chr10.1293 Acer truncatum HOM05D006198 ORTHO05D008226 1.9e-65 253.1 203 65.0
Eucgr.E02394 Eucalyptus grandis HOM05D006198 ORTHO05D008226 2.5e-65 252.7 202 65.8
Ciclev10016356m.g Citrus clementina HOM05D006198 ORTHO05D008226 2.1e-64 249.6 205 64.9
Nn3g20699 Nelumbo nucifera HOM05D006198 ORTHO05D008226 8.0e-64 247.7 201 67.7
PGR083G0877 Punica granatum HOM05D006198 ORTHO05D008226 1.8e-63 246.5 203 63.1
Sp7g15810 Schrenkiella parvula HOM05D006198 ORTHO05D008226 1.8e-63 246.5 214 62.6
Thhalv10024846m.g Eutrema salsugineum HOM05D006198 ORTHO05D003063 3.0e-63 245.7 197 65.5
THA.LOC104827723 Tarenaya hassleriana HOM05D006198 ORTHO05D008226 5.2e-63 245.0 201 62.2
MBI10_g21114_MAGBIO Magnolia biondii HOM05D006198 ORTHO05D008226 8.8e-63 244.2 202 65.8
Gohir.A09G077700 Gossypium hirsutum HOM05D006198 ORTHO05D008226 1.2e-62 243.8 202 65.3
Gorai.006G093100 Gossypium raimondii HOM05D006198 ORTHO05D008226 2.0e-62 243.0 202 65.3
Gohir.D09G077900 Gossypium hirsutum HOM05D006198 ORTHO05D008226 2.6e-62 242.7 202 64.9
Phvul.009G219000 Phaseolus vulgaris HOM05D006198 ORTHO05D008226 3.3e-62 242.3 203 65.0
Lalb_Chr12g0208941 Lupinus albus HOM05D006198 ORTHO05D008226 4.4e-62 241.9 201 63.7
QL05p058855 Quercus lobata HOM05D006198 ORTHO05D008226 4.4e-62 241.9 206 63.6
CsaV3_6G051650 Cucumis sativus L. HOM05D006198 ORTHO05D008226 5.7e-62 241.5 202 63.4
Nn6g32274 Nelumbo nucifera HOM05D006198 ORTHO05D008226 5.7e-62 241.5 201 65.7
C07p49570 Brassica napus HOM05D006198 ORTHO05D003063 7.5e-62 241.1 201 64.2
Aa31LG6G950 Aethionema arabicum HOM05D006198 ORTHO05D008226 9.7e-62 240.7 206 63.6
Actinidia39563 Actinidia chinensis HOM05D006198 ORTHO05D008226 1.3e-61 240.4 210 65.7
BolC7t45461H Brassica oleracea HOM05D006198 ORTHO05D003063 1.3e-61 240.4 201 64.2
MELO3C007142.2 Cucumis melo HOM05D006198 ORTHO05D008226 1.7e-61 240.0 203 62.6
Glyma.09G082200 Glycine max HOM05D006198 ORTHO05D008226 3.7e-61 238.8 203 64.5
arahy.Tifrunner.gnm1.ann1.ET305C Arachis hypogaea HOM05D006198 ORTHO05D008226 8.2e-61 237.7 199 66.8
A03p51170 Brassica napus HOM05D006198 ORTHO05D003063 1.1e-60 237.3 202 64.4
BraA03t14199Z Brassica rapa HOM05D006198 ORTHO05D003063 1.4e-60 236.9 202 64.4
RcHm_v2.0_Chr5g0013711 Rosa chinensis HOM05D006198 ORTHO05D008226 1.8e-60 236.5 206 63.1
Actinidia07684 Actinidia chinensis HOM05D006198 ORTHO05D008226 2.4e-60 236.1 211 65.4
CiPaw.09G125600 Carya illinoinensis HOM05D006198 ORTHO05D008226 3.1e-60 235.7 204 63.7
arahy.Tifrunner.gnm1.ann1.8B838V Arachis hypogaea HOM05D006198 ORTHO05D008226 4.1e-60 235.3 199 66.3
AL7G36130 Arabidopsis lyrata HOM05D006198 ORTHO05D003063 5.3e-60 235.0 201 62.7
Ca_18268_v3 Cicer arietinum L. HOM05D006198 ORTHO05D008226 1.6e-59 233.4 206 62.6
FvH4_3g05790 Fragaria vesca HOM05D006198 ORTHO05D008226 1.6e-59 233.4 202 64.4
FAN16G3463 Fragaria x ananassa HOM05D006198 ORTHO05D008226 1.6e-59 233.4 206 64.1
EL10Ac8g19743 Beta vulgaris HOM05D006198 ORTHO05D008226 2.7e-59 232.6 204 61.8
ClCG01G024530 Citrullus lanatus HOM05D006198 ORTHO05D008226 2.7e-59 232.6 201 62.2
Glyma.15G190700 Glycine max HOM05D006198 ORTHO05D008226 2.7e-59 232.6 202 61.4
MD10G1263800 Malus domestica HOM05D006198 ORTHO05D008226 7.7e-59 231.1 206 61.2
Lj4g0025062 Lotus japonicus HOM05D006198 ORTHO05D003063 1.0e-58 230.7 209 63.2
Prupe.4G078700 Prunus persica HOM05D006198 ORTHO05D008226 1.7e-58 229.9 203 64.0
Sed0015649 Sechium edule HOM05D006198 ORTHO05D008226 2.2e-58 229.6 203 60.1
vmacro15943 Vaccinium macrocarpon HOM05D006198 ORTHO05D008226 3.8e-58 228.8 207 61.4
Haze_05575 Corylus avellana HOM05D006198 ORTHO05D008226 5.0e-58 228.4 204 65.7
VMungo1309G2860 Vigna mungo HOM05D006198 ORTHO05D008226 5.0e-58 228.4 203 62.6
ECA248G2800 Erigeron canadensis HOM05D006198 ORTHO05D008226 8.5e-58 227.6 206 61.2
FAN11G0340 Fragaria x ananassa HOM05D006198 ORTHO05D008226 1.1e-57 227.3 202 63.4
Hma1.2p1_0259F.1_g104290 Hydrangea macrophylla HOM05D006198 ORTHO05D008226 1.5e-57 226.9 200 64.0
PSO170G0869 Papaver somniferum HOM05D006198 ORTHO05D008226 2.5e-57 226.1 208 63.5
ATR0585G073 Amborella trichopoda HOM05D006198 ORTHO05D008226 4.2e-57 225.3 202 60.9
Psat7g090320 Pisum sativum HOM05D006198 ORTHO05D008226 5.5e-57 224.9 206 60.2
Carub.0007s2303 Capsella rubella HOM05D006198 ORTHO05D008226 7.2e-57 224.6 202 62.9
Lj2A307G26 Lonicera japonica HOM05D006198 ORTHO05D008226 7.2e-57 224.6 210 64.3
MSTRG.16229 Avicennia marina HOM05D006198 ORTHO05D008226 9.4e-57 224.2 213 60.6
PSO017G1039 Papaver somniferum HOM05D006198 ORTHO05D008226 1.6e-56 223.4 209 62.7
Aqoxy4G00108 Aquilegia oxysepala HOM05D006198 ORTHO05D008226 2.1e-56 223.0 202 60.4
AUR62030229 Chenopodium quinoa HOM05D006198 ORTHO05D008226 3.6e-56 222.2 205 59.5
GSVIVG01021428001 Vitis vinifera HOM05D006198 ORTHO05D008226 6.1e-56 221.5 180 66.1
Medtr4g096750 Medicago truncatula HOM05D006198 ORTHO05D008226 2.3e-55 219.5 206 58.7
CANSAT35G1481 Cannabis sativa HOM05D006198 ORTHO05D008226 3.0e-55 219.2 204 62.7
SalBow8G2100 Salvia bowleyana HOM05D006198 ORTHO05D008226 4.0e-55 218.8 214 58.9
BcaNung05123 Brassica carinata HOM05D006198 ORTHO05D008226 2.0e-54 216.5 181 63.0
Nitab4.5_0005219g0070 Nicotiana tabacum HOM05D006198 ORTHO05D008226 4.4e-54 215.3 215 59.1
AUR62027530 Chenopodium quinoa HOM05D006198 ORTHO05D008226 5.7e-54 214.9 194 61.3
Migut.M00923 Erythranthe guttata HOM05D006198 ORTHO05D008226 7.5e-54 214.5 214 59.3
HanXRQChr01g0020411 Helianthus annuus HOM05D006198 ORTHO05D008226 1.3e-53 213.8 203 58.6
Nitab4.5_0001655g0050 Nicotiana tabacum HOM05D006198 ORTHO05D008226 3.7e-53 212.2 215 57.2
Lsat_1_v5_gn_1_96760 Lactuca sativa HOM05D006198 ORTHO05D008226 1.8e-52 209.9 207 59.4
BcaNung05671 Brassica carinata HOM05D006198 ORTHO05D008226 3.5e-51 205.7 180 61.7
Peaxi162Scf00796g00114 Petunia axillaris HOM05D006198 ORTHO05D008226 5.9e-51 204.9 196 58.7
CDE02G2137 Ceratophyllum demersum HOM05D006198 ORTHO05D008226 7.7e-51 204.5 204 56.4
Sopen02g019760 Solanum pennellii HOM05D006198 ORTHO05D008226 5.0e-50 201.8 209 56.9
SGA_v2.0_scaffold1G00157 Striga asiatica HOM05D006198 ORTHO05D008226 5.0e-50 201.8 213 56.8
Solyc02g070680.4 Solanum lycopersicum HOM05D006198 ORTHO05D008226 1.1e-49 200.7 209 56.5
Cfa000959 Carpinus fangiana HOM05D006198 ORTHO05D008226 1.5e-49 200.3 180 64.4
Cc09_g09250 Coffea canephora HOM05D006198 ORTHO05D008226 2.5e-49 199.5 186 63.4
HPP92_023266 Vanilla planifolia HOM05D006198 ORTHO05D008226 5.5e-49 198.4 201 57.2
HPP92_023299 Vanilla planifolia HOM05D006198 ORTHO05D008226 1.2e-48 197.2 201 56.2
CAN.G650.24 Capsicum annuum HOM05D006198 ORTHO05D008226 4.7e-48 195.3 207 54.6
Sc24g0001850 Simmondsia chinensis HOM05D006198 ORTHO05D008226 6.1e-48 194.9 203 55.2
PGSC0003DMG401008288 Solanum tuberosum HOM05D006198 ORTHO05D008226 6.1e-48 194.9 214 54.2
SGA_v2.0_scaffold333G48994 Striga asiatica HOM05D006198 ORTHO05D008226 8.0e-48 194.5 214 55.6
unitig_578.g16668 Utricularia gibba HOM05D006198 ORTHO05D008226 1.2e-46 190.7 212 55.7
Zm00001eb157440 Zea mays HOM05D006198 ORTHO05D008226 2.0e-46 189.9 204 55.4
Os01g0666500 Oryza sativa ssp. japonica HOM05D006198 ORTHO05D008226 4.4e-46 188.7 207 52.7
Zm00001eb359760 Zea mays HOM05D006198 ORTHO05D008226 6.3e-45 184.9 209 54.1
SEGI_09220 Sequoiadendron giganteum HOM05D006198 ORTHO05D008226 5.4e-44 181.8 210 51.9
DCAR_025303 Daucus carota HOM05D006198 ORTHO05D008226 3.8e-42 175.6 212 51.9
Rhsim02G0156800 Rhododendron simsii HOM05D006198 ORTHO05D008226 2.3e-39 166.4 197 51.3
Oeu030914.3 Olea europaea HOM05D006198 ORTHO05D008226 8.9e-39 164.5 252 44.8
AagrBONN_evm.TU.Sc2ySwM_228.4358 Anthoceros agrestis HOM05D006198 ORTHO05D008226 9.8e-38 161.0 192 52.1
Pp3c24_15440 Physcomitrium patens HOM05D006198 ORTHO05D008226 1.6e-35 153.7 151 58.3
Mapoly0061s0133 Marchantia polymorpha HOM05D006198 ORTHO05D008226 6.6e-34 148.3 176 54.0
SMO361G0608 Selaginella moellendorffii HOM05D006198 ORTHO05D008226 1.1e-31 141.0 159 52.2
Atru.chr10.1305 Acer truncatum HOM05D006198 ORTHO05D008226 5.4e-28 128.6 118 61.0
CARHR225050 Cardamine hirsuta HOM05D006198 ORTHO05D008226 6.6e-26 121.7 112 58.0
CBR_g31781 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-24 115.9 202 45.0
Atru.chr10.1302 Acer truncatum HOM05D000067 ORTHO05D000280 1.4e-23 114.0 97 60.8
Hund21523 Selenicereus undatus HOM05D006198 ORTHO05D008226 1.3e-21 107.5 115 57.4
SEGI_25377 Sequoiadendron giganteum HOM05D006198 ORTHO05D008226 6.0e-19 98.6 93 57.0
CDE08G0452 Ceratophyllum demersum HOM05D001706 ORTHO05D008226 7.8e-19 98.2 121 45.5
Zm00001eb243030 Zea mays HOM05D006198 ORTHO05D008226 4.7e-16 89.0 113 49.6
Zm00001eb373810 Zea mays HOM05D006198 ORTHO05D008226 4.7e-16 89.0 113 49.6
Zm00001eb235600 Zea mays HOM05D006198 ORTHO05D008226 4.9e-13 79.0 104 47.1
CBR_g39020 Chara braunii HOM05D006198 ORTHO05D001303 1.2e-11 74.3 137 43.1
Cre12.g523800 Chlamydomonas reinhardtii HOM05D006198 ORTHO05D008226 4.7e-08 62.4 62 58.1
Cre12.g523832 Chlamydomonas reinhardtii HOM05D006198 ORTHO05D008226 4.7e-08 62.4 62 58.1


User provided reference genes

Program Settings