Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 4.6e-305 1050.4 540 100.0
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.4e-245 852.8 511 89.4
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 1.9e-229 799.3 515 84.7
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 1.9e-170 603.2 505 64.8
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 1.4e-165 587.0 505 63.2
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 2.1e-164 583.2 524 60.9
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 6.1e-164 581.6 507 62.3
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 5.1e-163 578.6 504 63.1
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 2.6e-162 576.2 515 61.2
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 3.7e-161 572.4 507 61.7
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 2.2e-158 563.1 515 60.2
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 6.5e-158 561.6 507 61.3
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 2.5e-157 559.7 471 65.0
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 3.2e-157 559.3 516 60.1
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 2.0e-154 550.1 484 63.2
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 5.7e-154 548.5 507 58.8
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 5.3e-152 542.0 519 58.4
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 9.1e-152 541.2 486 61.7
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.6e-151 540.4 510 60.0
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 2.0e-151 540.0 510 60.0
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 2.2e-150 536.6 460 64.6
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 5.0e-150 535.4 510 59.8
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 6.5e-150 535.0 522 58.4
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 2.5e-149 533.1 534 56.7
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 2.3e-147 526.6 525 56.6
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 1.7e-145 520.4 511 57.1
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 2.2e-145 520.0 509 58.0
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 8.2e-145 518.1 503 57.7
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 1.6e-143 513.8 469 59.9
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 4.5e-143 512.3 498 57.8
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 7.7e-143 511.5 503 57.3
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 1.3e-142 510.8 514 56.0
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.7e-142 510.4 537 55.3
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 8.5e-142 508.1 485 58.4
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.1e-141 507.7 531 55.0
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.2e-141 506.1 494 57.3
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 2.1e-140 503.4 506 55.9
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.0e-140 501.5 515 55.9
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.8e-139 500.4 515 55.5
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 5.7e-138 495.4 498 57.0
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 1.4e-136 490.7 505 54.5
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 1.8e-136 490.3 495 56.2
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 3.1e-136 489.6 397 67.0
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 1.2e-135 487.6 504 56.3
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 2.7e-135 486.5 500 55.6
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 3.5e-135 486.1 518 56.0
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 2.3e-134 483.4 505 56.2
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 2.9e-134 483.0 506 54.3
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 6.5e-134 481.9 494 56.3
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.9e-133 480.3 499 56.1
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 4.0e-131 472.6 499 54.3
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 7.5e-130 468.4 502 53.6
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 9.8e-130 468.0 496 54.6
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 1.3e-129 467.6 414 59.7
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 3.7e-129 466.1 499 53.7
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 4.9e-129 465.7 464 56.0
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 7.8e-127 458.4 532 52.1
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 1.7e-126 457.2 507 53.8
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 3.8e-126 456.1 421 60.6
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 1.5e-125 454.1 471 55.6
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 4.0e-123 446.0 500 53.2
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 5.8e-122 442.2 505 52.5
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 5.8e-122 442.2 395 59.7
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 7.5e-122 441.8 501 52.5
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 1.1e-120 438.0 524 51.3
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 1.9e-120 437.2 529 50.9
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 2.4e-120 436.8 506 51.8
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 7.0e-120 435.3 497 51.7
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 1.6e-119 434.1 420 56.0
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 1.5e-117 427.6 495 51.5
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 3.3e-117 426.4 495 51.3
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 3.3e-117 426.4 469 52.0
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 4.3e-117 426.0 331 70.4
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 1.6e-116 424.1 495 51.3
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 2.8e-116 423.3 495 51.3
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 2.3e-115 420.2 486 50.8
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 1.1e-112 411.4 506 47.0
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 7.0e-112 408.7 590 43.7
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 5.1e-110 402.5 510 45.5
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 8.6e-110 401.7 506 48.8
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 9.9e-106 388.3 429 53.4
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.2e-105 387.1 400 51.8
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 2.6e-98 363.6 438 48.6
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 3.4e-98 363.2 380 53.9
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 7.8e-95 352.1 349 57.0
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 5.1e-94 349.4 357 55.2
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 1.7e-89 334.3 445 46.7
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 3.1e-83 313.5 394 45.4
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.4e-82 310.1 376 48.4
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.2e-80 303.5 285 54.7
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 2.1e-79 300.8 285 55.8
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 4.6e-71 273.1 351 46.4
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 1.8e-70 271.2 278 52.2
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 1.1e-69 268.5 240 61.7
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 4.5e-66 256.5 285 47.0
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 1.4e-64 251.5 221 63.8
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 2.5e-64 250.8 220 63.6
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 4.3e-61 240.0 288 48.6
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 1.1e-59 235.3 193 66.3
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 1.4e-51 208.4 284 44.4
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 1.8e-51 208.0 193 60.1
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 9.1e-51 205.7 239 46.0
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 5.9e-50 203.0 175 61.1
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 6.7e-46 189.5 354 38.1
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 9.7e-45 185.7 173 54.3
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 8.2e-44 182.6 139 65.5
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.1e-43 180.6 173 53.8
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 9.1e-43 179.1 281 40.2
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 1.0e-41 175.6 106 85.8
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 2.2e-41 174.5 258 42.6
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 1.9e-40 171.4 178 53.9
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 6.1e-39 166.4 150 59.3
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 8.2e-36 156.0 157 54.1
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 1.1e-35 155.6 252 39.3
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 2.4e-35 154.5 396 34.1
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 9.1e-35 152.5 281 35.6
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 1.1e-32 145.6 169 46.7
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 2.1e-31 141.4 150 51.3
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 3.1e-27 127.5 96 68.8
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.9e-24 118.2 79 79.7
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 1.8e-19 101.7 155 40.0
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 2.7e-18 97.8 75 74.7
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 5.9e-18 96.7 81 61.7
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 3.8e-17 94.0 61 77.0
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 1.1e-16 92.4 108 48.1
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 5.2e-14 83.6 81 51.9
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 5.7e-13 80.1 104 46.2
CSS0030855 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.1e-11 73.9 58 62.1
CSS0036908 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.1e-11 73.9 58 62.1
unitig_32.g11513 Utricularia gibba HOM05D057528 ORTHO05D030710 2.5e-08 64.7 69 44.9
FAN16G0730 Fragaria x ananassa HOM05D006050 ORTHO05D007457 5.6e-08 63.5 58 51.7


User provided reference genes

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