Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 1.1e-41 172.9 89 100.0
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 3.5e-24 114.8 59 98.3
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 1.3e-23 112.8 94 68.1
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 1.2e-21 106.3 92 68.5
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 5.2e-20 100.9 92 64.1
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 8.8e-20 100.1 87 62.1
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 1.2e-19 99.8 92 59.8
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 1.2e-19 99.8 83 65.1
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.0e-19 99.0 80 66.2
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 2.6e-19 98.6 93 62.4
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 3.4e-19 98.2 74 71.6
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 4.4e-19 97.8 95 60.0
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 5.7e-19 97.4 57 80.7
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 9.8e-19 96.7 62 79.0
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 1.3e-18 96.3 59 79.7
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.7e-18 95.9 92 60.9
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 2.2e-18 95.5 60 80.0
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 2.2e-18 95.5 83 62.7
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 2.8e-18 95.1 91 60.4
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 4.8e-18 94.4 89 59.6
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 4.8e-18 94.4 92 60.9
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.8e-18 94.4 83 65.1
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 4.8e-18 94.4 81 64.2
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 6.3e-18 94.0 95 57.9
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 6.3e-18 94.0 61 73.8
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 8.3e-18 93.6 90 58.9
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 8.3e-18 93.6 58 74.1
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 8.3e-18 93.6 93 58.1
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 8.3e-18 93.6 93 59.1
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.1e-17 93.2 88 53.4
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 1.4e-17 92.8 57 71.9
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 1.8e-17 92.4 82 62.2
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 2.4e-17 92.0 68 66.2
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 2.4e-17 92.0 89 56.2
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 2.4e-17 92.0 89 56.2
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 2.4e-17 92.0 89 56.2
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 2.4e-17 92.0 89 56.2
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 2.4e-17 92.0 57 73.7
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 3.1e-17 91.7 91 59.3
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.1e-17 91.7 57 80.7
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.1e-17 91.7 59 76.3
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 3.1e-17 91.7 75 64.0
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 4.1e-17 91.3 89 56.2
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 4.1e-17 91.3 91 57.1
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 5.4e-17 90.9 90 56.7
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 5.4e-17 90.9 80 63.8
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.4e-17 90.9 74 64.9
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 5.4e-17 90.9 58 74.1
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 5.4e-17 90.9 60 80.0
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 7.0e-17 90.5 58 75.9
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 9.1e-17 90.1 56 75.0
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 1.2e-16 89.7 89 56.2
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 1.2e-16 89.7 58 77.6
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 1.6e-16 89.4 85 58.8
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 1.6e-16 89.4 90 58.9
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.6e-16 89.4 74 60.8
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.6e-16 89.4 90 57.8
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 2.0e-16 89.0 89 55.1
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 2.0e-16 89.0 70 68.6
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 2.7e-16 88.6 89 58.4
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.7e-16 88.6 75 65.3
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 4.5e-16 87.8 89 58.4
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 4.5e-16 87.8 58 74.1
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 4.5e-16 87.8 96 56.2
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 4.5e-16 87.8 57 70.2
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 5.9e-16 87.4 71 62.0
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 5.9e-16 87.4 59 72.9
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 7.7e-16 87.0 91 56.0
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 7.7e-16 87.0 61 65.6
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 1.0e-15 86.7 89 57.3
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 1.0e-15 86.7 60 68.3
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 1.3e-15 86.3 60 71.7
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 1.7e-15 85.9 87 54.0
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 1.7e-15 85.9 64 68.8
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 1.7e-15 85.9 89 56.2
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 2.3e-15 85.5 75 60.0
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 2.9e-15 85.1 57 70.2
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 2.9e-15 85.1 89 57.3
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 3.8e-15 84.7 89 55.1
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 5.0e-15 84.3 62 72.6
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 5.0e-15 84.3 46 87.0
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 6.6e-15 84.0 89 56.2
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 5.5e-14 80.9 63 68.3
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 7.2e-14 80.5 58 67.2
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 9.5e-14 80.1 48 81.2
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.2e-13 79.7 63 66.7
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.6e-13 79.3 86 54.7
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.8e-12 75.9 50 74.0
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 4.0e-12 74.7 48 70.8
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 6.8e-12 73.9 46 73.9
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 1.2e-11 73.2 48 70.8
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 5.7e-11 70.9 89 49.4
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 5.4e-09 64.3 49 59.2
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 1.6e-08 62.8 63 49.2
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 2.0e-08 62.4 54 51.9
Pp3c19_16990 Physcomitrium patens HOM05D007598 ORTHO05D317919 1.9e-06 55.8 68 48.5
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.9e-06 55.8 50 50.0
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 4.3e-06 54.7 45 55.6
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 9.5e-06 53.5 48 52.1


User provided reference genes

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