Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 1.1e-38 162.9 85 100.0
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 9.6e-32 139.8 85 84.7
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.3e-25 119.4 85 75.3
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.7e-16 87.4 82 56.1
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 4.8e-15 84.3 86 54.7
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 4.8e-15 84.3 86 53.5
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.3e-15 84.0 82 52.4
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.3e-15 84.0 82 52.4
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 6.3e-15 84.0 85 49.4
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.1e-14 83.2 80 56.2
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 1.4e-14 82.8 88 50.0
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.1e-14 81.6 86 51.2
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 4.1e-14 81.3 80 51.2
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 5.3e-14 80.9 86 50.0
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 6.9e-14 80.5 93 50.5
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 9.0e-14 80.1 88 48.9
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.2e-13 79.7 86 48.8
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 1.5e-13 79.3 87 49.4
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.5e-13 79.3 85 55.3
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 2.0e-13 79.0 81 54.3
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 2.6e-13 78.6 85 49.4
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 3.4e-13 78.2 92 51.1
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 4.5e-13 77.8 90 48.9
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 7.7e-13 77.0 82 52.4
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.0e-12 76.6 89 50.6
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.0e-12 76.6 93 46.2
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 1.0e-12 76.6 86 50.0
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 1.0e-12 76.6 89 49.4
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.7e-12 75.9 82 51.2
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.7e-12 75.9 90 52.2
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 2.2e-12 75.5 85 47.1
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 2.9e-12 75.1 88 46.6
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 2.9e-12 75.1 81 50.6
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.8e-12 74.7 85 50.6
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 3.8e-12 74.7 96 50.0
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 3.8e-12 74.7 91 51.6
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 5.0e-12 74.3 90 52.2
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 6.5e-12 73.9 85 45.9
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 8.5e-12 73.6 83 48.2
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 1.1e-11 73.2 101 41.6
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 1.1e-11 73.2 88 47.7
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 1.4e-11 72.8 102 43.1
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 1.4e-11 72.8 91 45.1
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 1.4e-11 72.8 102 44.1
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 1.9e-11 72.4 85 44.7
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 1.9e-11 72.4 78 52.6
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 2.5e-11 72.0 110 40.0
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.5e-11 72.0 85 45.9
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 2.5e-11 72.0 86 47.7
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.5e-11 72.0 100 46.0
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 4.2e-11 71.2 102 44.1
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 4.2e-11 71.2 94 43.6
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 5.5e-11 70.9 62 58.1
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 7.2e-11 70.5 89 43.8
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 7.2e-11 70.5 92 45.7
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 9.4e-11 70.1 90 41.1
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 9.4e-11 70.1 94 43.6
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.2e-10 69.7 92 45.7
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 1.6e-10 69.3 94 42.6
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 2.1e-10 68.9 68 57.4
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.7e-10 68.6 92 45.7
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.7e-10 68.6 92 45.7
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 2.7e-10 68.6 87 46.0
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 3.6e-10 68.2 82 46.3
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.6e-10 68.2 92 44.6
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 4.6e-10 67.8 44 68.2
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 4.6e-10 67.8 98 42.9
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 7.9e-10 67.0 86 43.0
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 7.9e-10 67.0 85 43.5
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 1.4e-09 66.2 95 40.0
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 1.4e-09 66.2 90 43.3
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.4e-09 66.2 54 59.3
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 1.8e-09 65.9 87 40.2
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 1.8e-09 65.9 44 65.9
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 1.8e-09 65.9 44 65.9
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 1.8e-09 65.9 86 43.0
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 2.3e-09 65.5 107 38.3
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 2.3e-09 65.5 64 51.6
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 3.0e-09 65.1 101 42.6
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 3.0e-09 65.1 94 41.5
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 3.9e-09 64.7 44 65.9
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 5.1e-09 64.3 69 44.9
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 5.1e-09 64.3 44 63.6
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 6.7e-09 63.9 44 63.6
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 8.8e-09 63.5 95 41.1
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 1.1e-08 63.2 49 59.2
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 1.5e-08 62.8 86 41.9
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 1.5e-08 62.8 80 42.5
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 1.5e-08 62.8 82 47.6
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 1.5e-08 62.8 91 40.7
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 4.3e-08 61.2 69 44.9
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 4.3e-08 61.2 68 48.5
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 5.7e-08 60.8 69 44.9
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 5.7e-08 60.8 69 44.9
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 5.7e-08 60.8 69 44.9
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 5.7e-08 60.8 69 44.9
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 7.4e-08 60.5 49 59.2
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 7.4e-08 60.5 80 42.5
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 7.4e-08 60.5 69 49.3
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 9.7e-08 60.1 101 38.6
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 9.7e-08 60.1 79 41.8
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.3e-07 59.7 55 54.5
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.3e-07 59.7 65 50.8
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.3e-07 59.7 65 50.8
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 2.2e-07 58.9 40 62.5
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 2.2e-07 58.9 69 46.4
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 2.2e-07 58.9 69 46.4
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 2.2e-07 58.9 69 46.4
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 2.2e-07 58.9 69 46.4
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 2.8e-07 58.5 69 46.4
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 2.8e-07 58.5 80 50.0
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 3.7e-07 58.2 78 48.7
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 3.7e-07 58.2 72 47.2
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 4.8e-07 57.8 44 56.8
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 8.2e-07 57.0 38 63.2
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.4e-06 56.2 58 53.4
Sed0022207 Sechium edule HOM05D006325 ORTHO05D007878 1.8e-06 55.8 73 46.6
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 4.1e-06 54.7 39 61.5


User provided reference genes

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