Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 1.1e-259 899.4 469 100.0
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 8.9e-188 660.6 469 79.5
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 1.3e-146 523.9 473 67.4
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 3.8e-114 416.0 439 58.1
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 1.0e-95 354.8 498 47.6
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 8.9e-95 351.7 491 47.7
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 5.4e-92 342.4 497 48.3
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 7.0e-92 342.0 483 49.5
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 6.0e-91 339.0 490 48.4
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 3.9e-90 336.3 493 47.9
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 1.1e-89 334.7 477 47.4
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 1.9e-89 334.0 490 48.8
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 6.2e-88 328.9 476 48.5
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 1.8e-87 327.4 419 50.4
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 3.1e-87 326.6 489 47.0
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 2.6e-86 323.6 476 47.9
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 9.8e-86 321.6 500 46.4
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.3e-85 321.2 500 45.8
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 1.7e-85 320.9 476 46.6
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 2.9e-85 320.1 237 70.5
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 5.4e-84 315.8 495 45.7
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.6e-83 314.3 491 45.8
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 6.0e-83 312.4 483 46.4
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 1.3e-82 311.2 478 47.1
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 2.3e-82 310.5 436 48.2
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 1.1e-81 308.1 425 48.9
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 1.1e-81 308.1 515 43.3
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 1.9e-81 307.4 503 45.5
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.9e-81 307.4 473 45.9
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 3.3e-81 306.6 480 47.3
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 5.6e-81 305.8 487 44.4
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 5.6e-81 305.8 473 45.0
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 6.2e-80 302.4 491 44.6
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 1.1e-79 301.6 498 46.0
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 2.3e-79 300.4 422 48.3
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 2.3e-79 300.4 506 43.1
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 6.8e-79 298.9 400 48.5
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 1.2e-78 298.1 417 48.9
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 2.0e-78 297.4 506 43.1
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 2.6e-78 297.0 256 67.2
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 1.3e-77 294.7 266 60.2
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 1.3e-77 294.7 499 43.5
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 1.7e-77 294.3 489 44.2
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 2.9e-77 293.5 370 51.4
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 3.7e-77 293.1 434 46.1
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 6.4e-77 292.4 504 41.7
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 1.2e-75 288.1 445 47.0
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 2.1e-75 287.3 488 41.8
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 2.1e-75 287.3 480 43.3
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 3.5e-75 286.6 497 44.5
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 6.0e-75 285.8 506 43.3
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 7.8e-75 285.4 515 41.6
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 2.3e-74 283.9 493 44.4
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 1.9e-73 280.8 473 43.3
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 3.3e-73 280.0 443 46.3
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 7.3e-73 278.9 501 42.5
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 2.8e-72 276.9 395 46.8
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.8e-71 274.2 485 43.7
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 8.9e-71 271.9 485 42.1
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 1.2e-70 271.6 488 43.6
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 2.0e-70 270.8 506 41.9
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 2.9e-69 266.9 486 42.4
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 2.9e-69 266.9 554 39.9
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.4e-68 264.6 527 38.5
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 2.4e-68 263.8 412 45.1
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 3.2e-68 263.5 473 42.9
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 5.4e-68 262.7 392 47.7
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 1.2e-67 261.5 387 44.4
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 2.7e-67 260.4 483 41.0
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 3.5e-67 260.0 450 44.2
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 7.8e-67 258.8 387 44.2
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.3e-66 258.1 364 46.7
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.3e-66 258.1 475 43.6
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 3.9e-66 256.5 243 59.3
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 6.6e-66 255.8 322 50.6
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 3.3e-65 253.4 597 35.5
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 4.3e-65 253.1 475 42.9
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 5.6e-65 252.7 343 48.1
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 2.8e-64 250.4 308 50.6
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 6.2e-64 249.2 475 41.9
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 1.1e-63 248.4 306 50.0
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.1e-63 248.4 472 43.0
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 2.4e-63 247.3 303 50.5
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 2.4e-63 247.3 438 42.0
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 9.0e-63 245.4 475 41.9
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 2.0e-62 244.2 405 43.0
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 3.4e-62 243.4 470 39.8
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 4.4e-62 243.0 304 50.0
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 4.4e-62 243.0 239 56.5
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 5.8e-62 242.7 306 49.7
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 7.6e-62 242.3 309 50.8
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 9.9e-62 241.9 300 50.7
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 3.8e-61 240.0 500 38.6
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 8.4e-61 238.8 416 41.8
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 1.1e-60 238.4 351 48.1
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 1.1e-60 238.4 263 54.8
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 2.4e-60 237.3 505 36.6
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 7.1e-60 235.7 300 49.3
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 1.6e-59 234.6 368 42.9
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 1.3e-58 231.5 300 49.0
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 1.3e-58 231.5 300 49.0
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 5.1e-58 229.6 186 65.6
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 8.7e-58 228.8 298 50.0
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 1.5e-57 228.0 306 48.4
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 9.6e-57 225.3 460 40.2
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 1.3e-56 224.9 433 42.3
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 1.3e-56 224.9 491 39.7
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 3.6e-56 223.4 352 42.6
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 4.8e-56 223.0 363 44.4
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 2.4e-55 220.7 316 46.5
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 1.2e-54 218.4 420 42.4
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 3.8e-53 213.4 302 47.7
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 4.9e-53 213.0 320 45.0
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.4e-47 194.1 321 43.3
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 3.1e-47 193.7 188 58.5
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 4.9e-45 186.4 311 40.8
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 1.2e-43 181.8 184 56.5
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 2.3e-42 177.6 308 42.5
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 6.7e-42 176.0 392 35.5
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.1e-41 175.3 256 47.7
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 3.7e-40 170.2 312 39.7
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 5.3e-39 166.4 393 36.9
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 9.0e-39 165.6 313 40.9
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 2.6e-38 164.1 421 33.7
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 3.5e-35 153.7 472 31.8
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 5.1e-34 149.8 176 53.4
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 3.7e-32 143.7 102 72.5
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 1.1e-31 142.1 219 43.4
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 1.1e-31 142.1 320 37.8
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 8.5e-29 132.5 165 51.5
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 1.6e-27 128.3 154 47.4
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 3.6e-27 127.1 190 43.7
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 7.9e-27 125.9 187 42.2
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 8.8e-26 122.5 69 78.3
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 1.1e-25 122.1 153 50.3
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 3.3e-25 120.6 69 76.8
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.3e-25 120.6 70 81.4
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 5.7e-25 119.8 102 58.8
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.7e-24 117.1 66 77.3
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 8.2e-24 115.9 102 58.8
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 4.1e-23 113.6 248 33.9
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 2.6e-22 110.9 477 30.0
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 1.0e-21 109.0 116 50.0
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.4e-20 105.1 102 57.8
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 2.7e-19 100.9 175 41.1
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 3.9e-18 97.1 112 46.4
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.4e-15 87.8 132 46.2
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 4.1e-15 87.0 268 32.8
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 5.3e-15 86.7 261 33.7
Ah.16g108870 Amaranthus hybridus HOM05D004030 ORTHO05D004952 8.5e-13 79.3 245 31.4
Ah.16g108300 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-12 79.0 245 31.4
Ah.16g108330 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-12 79.0 245 31.4
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 2.5e-12 77.8 292 27.4
Ah.16g108890 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.1e-11 74.7 254 29.9
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 2.1e-11 74.7 100 39.0
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 2.3e-10 71.2 66 62.1
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.0e-10 70.9 241 32.0
Cpa.g.sc7.86 Carica papaya HOM05D004030 ORTHO05D033917 3.7e-08 63.9 131 42.0


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