Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 0.0e+00 1658.7 865 100.0
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 0.0e+00 1164.4 772 82.3
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.3e-149 533.9 1005 40.6
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 3.1e-117 427.2 855 39.8
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 4.3e-111 406.8 875 37.9
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 1.2e-108 398.7 795 38.9
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 2.9e-107 394.0 857 37.5
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 1.2e-105 388.7 844 37.3
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 1.3e-104 385.2 863 37.7
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 8.1e-102 375.9 858 36.7
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 8.1e-102 375.9 877 36.3
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.6e-100 370.9 844 36.0
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 2.4e-98 364.4 861 36.8
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 1.3e-96 358.6 866 35.9
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 6.6e-96 356.3 884 36.4
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 2.1e-94 351.3 868 36.6
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 6.2e-94 349.7 815 36.7
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.5e-92 343.6 836 36.1
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 9.3e-90 335.9 843 34.3
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 5.1e-88 330.1 864 34.7
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.9e-87 328.2 835 35.4
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.8e-86 324.3 781 35.2
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 1.4e-85 322.0 908 34.3
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 5.3e-85 320.1 815 34.7
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.7e-78 297.4 916 32.4
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 8.4e-75 286.2 856 31.8
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 4.2e-74 283.9 852 32.6
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 2.1e-73 281.6 764 33.4
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 3.9e-72 277.3 834 32.7
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 5.1e-72 276.9 863 33.0
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 1.6e-70 271.9 830 32.8
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 2.6e-68 264.6 459 41.8
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.0e-67 262.7 809 31.4
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 3.8e-67 260.8 814 31.2
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 6.5e-67 260.0 901 31.5
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 5.5e-66 256.9 855 30.1
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 1.4e-64 252.3 870 30.2
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 3.0e-64 251.1 908 30.4
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.5e-63 248.8 388 41.5
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 5.0e-59 233.8 826 30.5
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 3.6e-57 227.6 846 29.8
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 2.2e-54 218.4 866 28.1
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 4.8e-54 217.2 803 29.3
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 1.8e-53 215.3 844 29.1
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 7.0e-53 213.4 851 29.3
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 3.5e-52 211.1 855 30.2
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.3e-51 209.1 915 28.2
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 1.7e-51 208.8 945 27.8
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 2.2e-51 208.4 845 28.8
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 2.2e-51 208.4 838 29.7
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 3.8e-51 207.6 805 30.7
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 1.6e-49 202.2 857 29.9
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.4e-48 199.1 302 46.0
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 1.8e-48 198.7 799 27.4
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 2.3e-48 198.4 828 29.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 7.5e-47 193.4 855 28.9
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 2.2e-46 191.8 350 39.4
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 2.4e-45 188.3 845 29.1
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 2.4e-45 188.3 939 29.1
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 7.0e-45 186.8 866 28.5
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 1.3e-43 182.6 828 28.7
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.5e-42 179.1 882 27.1
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 1.5e-42 179.1 923 26.1
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 4.2e-42 177.6 828 27.9
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 4.2e-42 177.6 842 28.3
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 1.2e-41 176.0 841 27.1
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 2.1e-41 175.3 820 27.9
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 2.3e-40 171.8 881 26.4
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 1.5e-39 169.1 819 27.5
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 2.4e-37 161.8 775 26.8
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.6e-36 159.1 607 28.2
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 5.9e-36 157.1 923 25.7
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 5.0e-35 154.1 872 25.7
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 4.2e-34 151.0 573 30.0
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.2e-31 142.9 878 25.9
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 1.3e-30 139.4 880 25.7
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 1.3e-30 139.4 424 29.7
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 3.7e-30 137.9 363 32.0
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 3.7e-30 137.9 527 31.5
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.2e-28 132.9 555 29.4
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.0e-27 129.8 888 26.5
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.7e-27 129.0 892 25.9
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 1.2e-25 122.9 824 26.1
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 2.8e-25 121.7 196 42.3
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 4.0e-24 117.9 856 24.5
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 4.4e-23 114.4 116 53.4
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 8.3e-22 110.2 169 45.6
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 9.2e-21 106.7 193 38.9
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.6e-20 105.9 166 42.8
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 2.7e-20 105.1 274 31.0
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 7.8e-20 103.6 314 32.2
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 7.8e-20 103.6 886 22.5
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 1.7e-19 102.4 770 24.0
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.5e-18 99.4 792 24.1
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 8.0e-17 93.6 465 28.4
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 1.8e-16 92.4 245 33.5
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 5.2e-16 90.9 863 24.7
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 2.6e-15 88.6 104 44.2
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 4.4e-15 87.8 173 35.3
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 4.9e-14 84.3 191 35.1
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 3.2e-13 81.6 343 27.4
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 1.2e-12 79.7 95 48.4
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.2e-12 79.7 65 55.4
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 3.5e-12 78.2 819 24.1
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.3e-11 76.3 65 53.8
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 1.7e-11 75.9 165 38.2
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 3.0e-11 75.1 114 40.4
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.9e-10 72.4 53 62.3
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 6.2e-09 67.4 64 56.2
QL05p044176 Quercus lobata HOM05D007489 ORTHO05D008037 6.2e-09 67.4 165 38.2
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 6.8e-08 63.9 52 57.7
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 8.9e-08 63.5 52 57.7


User provided reference genes

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