Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 1.4e-116 422.9 215 100.0
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 1.4e-116 422.9 215 100.0
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 4.2e-100 368.2 215 88.4
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 3.2e-76 288.9 205 73.7
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 9.4e-76 287.3 211 73.5
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.2e-75 287.0 205 73.7
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 1.2e-75 287.0 187 79.7
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.7e-75 285.8 205 73.2
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 2.7e-75 285.8 205 73.2
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 1.0e-74 283.9 173 82.7
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.3e-74 282.7 192 75.5
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 2.0e-73 279.6 206 71.4
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 2.2e-72 276.2 199 73.4
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.4e-71 273.5 173 79.8
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 3.1e-71 272.3 173 76.9
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 4.1e-71 271.9 206 71.4
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 5.4e-71 271.6 173 80.3
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 5.4e-71 271.6 171 78.4
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 7.0e-71 271.2 203 72.9
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.2e-70 270.4 184 77.2
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.0e-70 269.6 171 77.2
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 3.5e-70 268.9 176 75.6
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 4.5e-70 268.5 205 70.2
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 1.0e-69 267.3 167 77.8
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.0e-69 267.3 170 78.2
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 2.2e-69 266.2 205 68.3
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 2.2e-69 266.2 204 68.6
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 2.9e-69 265.8 171 77.2
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 3.8e-69 265.4 167 77.2
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 3.8e-69 265.4 170 78.8
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 5.0e-69 265.0 176 74.4
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 8.5e-69 264.2 166 77.7
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.5e-68 263.5 203 67.5
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 3.2e-68 262.3 170 74.7
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 4.2e-68 261.9 170 75.9
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 2.1e-67 259.6 207 67.1
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 2.7e-67 259.2 166 75.9
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 2.7e-67 259.2 192 69.8
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 3.6e-67 258.8 206 66.5
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 4.7e-67 258.5 173 76.9
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.0e-66 257.3 174 72.4
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 1.0e-66 257.3 176 73.9
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 1.8e-66 256.5 175 73.7
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 4.0e-66 255.4 189 72.5
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 8.8e-66 254.2 170 77.1
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.2e-65 253.8 169 78.7
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 1.5e-65 253.4 171 76.0
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.4e-65 252.3 166 74.7
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 3.4e-65 252.3 166 75.9
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 3.4e-65 252.3 166 75.9
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 4.4e-65 251.9 166 75.9
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 7.5e-65 251.1 165 77.0
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 7.5e-65 251.1 171 74.9
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 1.7e-64 250.0 208 67.3
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 3.7e-64 248.8 164 75.0
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 3.7e-64 248.8 175 72.0
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 3.7e-64 248.8 167 73.7
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 6.3e-64 248.1 182 73.1
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.8e-63 246.5 180 73.3
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.8e-63 246.5 180 73.3
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.8e-63 246.5 172 74.4
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 1.8e-63 246.5 175 70.9
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 2.4e-63 246.1 161 75.2
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.1e-63 245.7 174 71.8
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 4.1e-63 245.4 166 71.7
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 7.0e-63 244.6 176 70.5
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 7.0e-63 244.6 173 72.3
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 2.0e-62 243.0 180 70.6
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 5.9e-62 241.5 163 74.2
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 7.7e-62 241.1 173 72.3
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 1.3e-61 240.4 183 67.2
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.9e-61 239.2 168 73.2
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 1.1e-60 237.3 170 69.4
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 1.1e-60 237.3 177 68.4
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 5.6e-60 235.0 174 67.8
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 1.6e-59 233.4 187 66.3
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 2.1e-59 233.0 174 69.5
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 3.0e-58 229.2 151 76.2
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 4.0e-58 228.8 175 66.3
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.2e-57 227.3 151 74.2
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 1.2e-57 227.3 209 59.3
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 2.6e-57 226.1 257 53.3
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 3.7e-56 222.2 153 71.2
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 6.4e-56 221.5 169 67.5
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 1.4e-55 220.3 227 55.5
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.8e-55 219.9 170 68.8
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 4.1e-55 218.8 165 64.8
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 9.2e-55 217.6 153 71.9
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 1.2e-54 217.2 137 78.8
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 3.5e-54 215.7 172 61.6
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.3e-53 213.8 171 61.4
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.1e-51 206.5 170 66.5
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 8.0e-51 204.5 171 59.1
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 9.2e-47 191.0 216 56.9
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 6.6e-45 184.9 172 59.3
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.5e-44 183.7 168 60.1
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 3.4e-41 172.6 166 57.8
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 1.1e-39 167.5 121 65.3
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 1.4e-39 167.2 120 66.7
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 2.1e-38 163.3 137 65.0
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 2.8e-35 152.9 130 60.0
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 6.2e-35 151.8 163 49.7
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 5.2e-34 148.7 201 47.3
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 2.6e-33 146.4 106 73.6
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 4.4e-33 145.6 102 71.6
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 5.8e-33 145.2 175 48.0
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.9e-28 130.2 161 39.8
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 1.6e-27 127.1 162 44.4
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 2.0e-25 120.2 92 59.8
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-20 103.6 69 65.2
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 3.2e-15 86.3 174 38.5
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.2e-14 84.3 79 58.2
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 2.4e-10 70.1 42 81.0


User provided reference genes

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