Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 2.0e-186 655.6 327 100.0
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.9e-124 448.4 273 84.6
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 9.6e-96 354.4 270 72.2
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.2e-76 290.0 253 64.0
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 6.5e-60 235.3 272 53.3
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 6.5e-60 235.3 251 55.4
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.2e-50 204.5 279 49.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.2e-43 179.9 302 43.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 3.6e-42 176.4 243 48.6
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 4.7e-42 176.0 264 46.2
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 3.9e-41 172.9 258 46.1
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.5e-40 171.0 265 45.7
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.4e-40 169.5 289 43.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 4.4e-40 169.5 282 42.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 4.4e-40 169.5 277 44.4
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.4e-40 168.7 278 43.9
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-38 164.9 262 45.4
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.4e-38 164.5 262 44.7
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 3.1e-38 163.3 290 44.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.1e-38 162.9 262 44.7
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 9.1e-38 161.8 287 44.3
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 9.1e-38 161.8 248 44.4
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.2e-37 161.4 262 44.3
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 1.2e-37 161.4 281 46.3
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 2.0e-37 160.6 290 42.1
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 4.5e-37 159.5 275 45.1
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 5.9e-37 159.1 265 42.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 5.9e-37 159.1 274 42.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.0e-36 158.3 280 41.4
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.8e-36 156.4 263 41.8
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.2e-35 153.3 259 41.3
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 5.5e-35 152.5 237 46.8
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.2e-34 151.4 232 43.5
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.7e-34 150.2 240 45.8
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 4.7e-34 149.4 245 42.4
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.1e-34 149.1 265 41.5
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 8.0e-34 148.7 247 43.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.0e-33 148.3 259 44.8
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.8e-33 147.5 263 41.4
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.3e-33 147.1 243 40.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 3.0e-33 146.7 290 41.7
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 3.0e-33 146.7 264 41.3
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.0e-33 146.7 264 41.3
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 6.7e-33 145.6 273 38.5
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 2.6e-32 143.7 258 42.2
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 2.2e-31 140.6 292 37.0
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.1e-30 138.3 260 40.4
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.4e-30 137.9 214 43.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.4e-30 137.9 278 37.8
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.8e-30 137.5 253 41.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.8e-30 137.5 238 43.7
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.4e-30 137.1 260 39.6
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 4.1e-30 136.3 244 40.6
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 4.1e-30 136.3 275 39.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.3e-30 136.0 260 39.6
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 7.0e-30 135.6 238 41.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.0e-30 135.6 260 39.6
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.6e-29 134.4 269 39.4
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.0e-29 134.0 276 36.2
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 5.9e-29 132.5 250 39.2
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.0e-28 131.7 264 40.2
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.7e-28 131.0 264 40.9
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.9e-28 130.2 234 40.6
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.8e-28 129.8 238 40.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 3.8e-28 129.8 277 38.3
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 3.8e-28 129.8 145 50.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 3.8e-28 129.8 239 39.7
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.8e-28 129.8 250 43.2
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 5.0e-28 129.4 267 38.6
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.5e-27 127.9 245 40.0
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.5e-27 127.1 253 39.1
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 3.2e-27 126.7 252 38.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 9.4e-27 125.2 239 38.1
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.2e-26 124.8 269 38.3
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.6e-26 124.4 257 38.5
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.1e-26 124.0 290 35.2
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 3.6e-26 123.2 244 39.3
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.6e-26 123.2 159 46.5
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 6.1e-26 122.5 252 39.7
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 6.1e-26 122.5 247 38.1
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 8.0e-26 122.1 144 45.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.4e-25 121.3 248 39.1
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-25 121.3 293 34.1
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.0e-25 120.2 152 48.0
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 8.8e-25 118.6 325 32.0
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.5e-24 117.9 240 42.5
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.6e-24 117.1 235 43.0
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 5.7e-24 115.9 254 37.0
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 9.8e-24 115.2 240 37.9
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.7e-23 114.4 250 40.0
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.2e-23 114.0 229 37.6
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.8e-23 112.8 268 36.2
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 8.3e-23 112.1 245 37.1
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.4e-22 111.3 262 37.8
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.2e-21 108.2 271 35.1
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.6e-21 107.8 288 31.9
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 3.5e-21 106.7 131 43.5
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.2e-20 104.0 162 43.2
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.9e-20 103.6 254 38.2
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.9e-20 103.6 254 38.2
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.9e-20 103.6 259 36.3
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 6.5e-20 102.4 271 34.3
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.1e-19 101.7 256 36.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.5e-19 100.5 245 35.9
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 2.5e-19 100.5 255 35.7
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 7.2e-19 99.0 269 33.8
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.7e-18 96.3 142 42.3
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 5.2e-17 92.8 209 34.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 8.3e-15 85.5 130 44.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 7.0e-14 82.4 276 30.8
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.6e-13 81.3 313 31.9
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 4.5e-13 79.7 208 32.2
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.3e-12 77.4 173 35.3
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 1.2e-08 65.1 85 41.2
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 2.6e-08 63.9 157 36.3
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 4.4e-08 63.2 135 36.3
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 5.7e-08 62.8 241 28.6


User provided reference genes

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