Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 0.0e+00 1163.7 594 100.0
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 4.6e-306 1053.9 594 92.4
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 7.7e-269 930.2 621 80.8
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 3.4e-168 595.9 627 55.0
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 3.6e-157 559.3 628 52.7
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 5.5e-150 535.4 630 50.8
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.8e-145 520.4 633 49.6
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.8e-145 520.4 631 48.5
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 9.1e-145 518.1 624 49.7
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.8e-143 512.7 633 48.5
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.9e-142 510.4 629 48.8
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.5e-142 510.0 633 51.2
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 4.2e-142 509.2 640 48.1
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.2e-141 507.7 630 49.0
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 3.9e-140 502.7 642 48.1
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 7.4e-139 498.4 631 50.6
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.4e-137 493.4 628 48.1
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 2.0e-136 490.3 669 47.4
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 5.9e-136 488.8 647 46.8
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 9.4e-134 481.5 627 47.2
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 9.4e-134 481.5 627 47.2
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.5e-131 474.2 658 45.6
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.5e-131 474.2 625 47.7
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 2.0e-131 473.8 632 46.8
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 9.1e-129 464.9 641 46.8
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 9.1e-129 464.9 649 46.5
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.2e-128 464.5 687 46.3
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 7.7e-128 461.8 653 46.1
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 1.3e-127 461.1 629 46.3
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 3.2e-126 456.4 627 46.6
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 8.8e-124 448.4 631 46.4
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.5e-123 447.6 642 44.7
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 9.8e-123 444.9 630 46.0
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 6.3e-122 442.2 634 45.4
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 9.1e-121 438.3 642 46.7
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 3.5e-120 436.4 632 46.2
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 5.9e-120 435.6 639 44.9
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.7e-119 434.1 638 45.6
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 2.3e-119 433.7 646 44.3
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.1e-118 431.4 631 44.8
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 1.6e-117 427.6 634 44.5
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 2.1e-117 427.2 652 47.1
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 8.0e-117 425.2 649 43.6
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 8.8e-116 421.8 633 43.6
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.0e-115 420.6 651 43.3
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.6e-115 420.2 654 43.3
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 9.8e-115 418.3 656 44.2
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 6.3e-114 415.6 650 43.1
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 7.0e-113 412.1 653 42.6
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 6.6e-111 405.6 645 44.3
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.5e-110 404.4 434 53.5
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 7.3e-110 402.1 628 43.6
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 3.6e-109 399.8 589 45.0
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 6.1e-109 399.1 640 43.8
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.0e-108 398.3 654 41.6
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 2.6e-107 393.7 630 43.5
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 4.9e-106 389.4 633 43.4
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 5.4e-105 386.0 648 40.9
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 4.7e-101 372.9 672 39.0
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 4.7e-101 372.9 651 40.9
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.7e-98 364.4 649 40.1
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 6.4e-98 362.5 646 44.3
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.1e-97 361.7 657 40.0
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.9e-97 360.9 650 40.8
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 3.2e-97 360.1 436 48.2
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 4.1e-97 359.8 492 46.5
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.2e-96 358.2 646 43.8
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 2.7e-96 357.1 515 44.7
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 7.8e-96 355.5 652 42.2
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 7.8e-96 355.5 535 44.7
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 3.3e-94 350.1 649 39.4
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 9.5e-94 348.6 622 40.8
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 8.1e-93 345.5 630 39.8
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 1.4e-92 344.7 636 39.6
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.4e-92 344.7 648 41.8
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 3.1e-92 343.6 649 42.1
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 3.7e-90 336.7 637 38.0
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 7.8e-88 328.9 695 37.1
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 3.6e-85 320.1 646 37.6
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 4.7e-85 319.7 639 37.6
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 6.2e-85 319.3 477 44.7
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.7e-82 311.2 650 37.1
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 6.4e-82 309.3 641 40.4
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.4e-81 307.4 600 40.8
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 2.4e-81 307.4 664 36.6
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 6.0e-80 302.8 621 39.1
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.3e-79 300.8 621 40.1
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.5e-78 298.1 620 37.7
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.5e-78 298.1 619 37.8
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 7.3e-78 295.8 630 38.9
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.6e-78 295.4 639 36.9
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 1.6e-77 294.7 600 38.8
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 2.4e-76 290.8 620 37.9
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.2e-76 289.7 527 37.2
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 9.0e-76 288.9 620 37.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 1.5e-75 288.1 631 37.1
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 2.0e-75 287.7 626 37.7
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 2.0e-75 287.7 619 39.4
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 5.8e-75 286.2 623 37.2
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 9.9e-75 285.4 493 39.1
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 9.9e-75 285.4 617 37.1
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.4e-73 281.6 491 40.3
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 2.4e-73 280.8 604 37.6
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 5.4e-73 279.6 583 39.3
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 7.8e-72 275.8 632 36.4
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.1e-71 273.1 667 37.2
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 8.7e-71 272.3 683 34.0
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.6e-70 269.6 630 37.3
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 3.6e-69 266.9 612 37.1
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 1.1e-68 265.4 643 35.3
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 2.4e-68 264.2 709 33.1
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 4.9e-66 256.5 672 34.2
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.4e-66 256.1 478 38.1
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 6.4e-66 256.1 648 36.1
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 2.4e-65 254.2 357 46.8
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 4.8e-61 240.0 456 38.8
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 2.2e-58 231.1 431 36.9
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 6.0e-56 223.0 431 38.1
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 7.9e-56 222.6 769 30.7
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 8.4e-50 202.6 463 35.2
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 4.3e-46 190.3 729 31.7
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.1e-44 185.7 232 46.1
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 1.8e-44 184.9 636 32.9
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 2.7e-40 171.0 599 30.1
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 6.7e-39 166.4 643 29.9
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 1.3e-37 162.2 147 59.2
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.0e-34 152.5 157 54.1
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 4.1e-28 130.6 191 45.5
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 5.2e-23 113.6 698 25.1
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 2.3e-15 88.2 422 28.4
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 8.8e-15 86.3 227 32.6
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 4.8e-13 80.5 185 38.4
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 1.6e-11 75.5 129 39.5
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 1.6e-11 75.5 118 40.7
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 5.9e-11 73.6 116 40.5
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.0e-10 72.8 183 33.9
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 1.6e-08 65.5 160 32.5


User provided reference genes

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