Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0019600 Salix brachista HOM05D014707 ORTHO05D009541 6.4e-159 564.7 449 100.0
Sabra11G0025500 Salix brachista HOM05D000891 ORTHO05D000761 1.8e-76 290.8 284 100.0
Sabra03G0110200 Salix brachista HOM05D014707 ORTHO05D009541 2.4e-41 174.1 177 59.9
Potri.011G032400 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.4e-33 148.3 226 93.8
Sabra07G0037000 Salix brachista HOM05D014707 ORTHO05D009541 3.6e-29 133.7 144 56.9
Potri.011G032312 Populus trichocarpa HOM05D000891 ORTHO05D000761 3.4e-27 127.1 227 90.3
Sabra04G0123200 Salix brachista HOM05D000076 ORTHO05D001150 2.5e-22 110.9 110 56.4
Sabra11G0025600 Salix brachista HOM05D000891 ORTHO05D000761 5.8e-19 99.8 234 78.2
Potri.011G032500 Populus trichocarpa HOM05D000891 ORTHO05D000761 9.9e-19 99.0 231 79.7
Sabra04G0016900 Salix brachista HOM05D000891 ORTHO05D000761 1.3e-18 98.6 225 70.2
Potri.004G029900 Populus trichocarpa HOM05D000891 ORTHO05D000761 3.9e-15 87.0 225 82.2
Sabra06G0179500 Salix brachista HOM05D000001 ORTHO05D010749 9.6e-14 82.4 78 55.1
Thecc.06G206400 Theobroma cacao HOM05D000891 ORTHO05D000761 8.1e-13 79.3 232 76.7
Sabra08G0092300 Salix brachista HOM05D000613 ORTHO05D000446 3.1e-12 77.4 96 46.9
Cfa000285 Carpinus fangiana HOM05D000891 ORTHO05D000761 5.3e-12 76.6 227 68.7
Cfa000286 Carpinus fangiana HOM05D000891 ORTHO05D000761 6.9e-12 76.3 44 77.3
Gohir.A06G121700 Gossypium hirsutum HOM05D000891 ORTHO05D000761 6.9e-12 76.3 51 70.6
Gohir.D06G125900 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.2e-11 75.5 50 72.0
Sabra19G0022100 Salix brachista HOM05D000054 ORTHO05D005077 1.5e-11 75.1 74 50.0
Prupe.4G030500 Prunus persica HOM05D000891 ORTHO05D000761 2.0e-11 74.7 49 69.4
TWI38G1234 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 2.0e-11 74.7 233 71.7
Haze_06642 Corylus avellana HOM05D000891 ORTHO05D000761 3.4e-11 73.9 44 75.0
MD05G1334700 Malus domestica HOM05D000891 ORTHO05D000761 3.4e-11 73.9 50 68.0
Manes.16G016000 Manihot esculenta HOM05D000891 ORTHO05D000761 3.4e-11 73.9 222 73.0
AUR62012561 Chenopodium quinoa HOM05D000891 ORTHO05D000761 4.5e-11 73.6 51 68.6
AUR62014639 Chenopodium quinoa HOM05D000891 ORTHO05D000761 7.6e-11 72.8 51 68.6
Haze_06643 Corylus avellana HOM05D000891 ORTHO05D000761 7.6e-11 72.8 225 69.8
CSS0031339 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 1.3e-10 72.0 51 64.7
COL.COLO4_31672 Corchorus olitorius HOM05D000891 ORTHO05D000761 1.3e-10 72.0 47 68.1
QL05p077802 Quercus lobata HOM05D000891 ORTHO05D000761 1.3e-10 72.0 44 77.3
Cfa000287 Carpinus fangiana HOM05D000891 ORTHO05D000761 1.7e-10 71.6 44 72.7
Duzib235G0069 Durio zibethinus HOM05D000891 ORTHO05D000761 1.7e-10 71.6 232 75.0
COL.COLO4_31671 Corchorus olitorius HOM05D000891 ORTHO05D000761 4.9e-10 70.1 38 78.9
Haze_06653 Corylus avellana HOM05D000891 ORTHO05D000761 4.9e-10 70.1 41 80.5
CANSAT56G0926 Cannabis sativa HOM05D000891 ORTHO05D000761 6.5e-10 69.7 51 66.7
Cfa000289 Carpinus fangiana HOM05D000891 ORTHO05D000761 6.5e-10 69.7 43 74.4
CiPaw.10G113500 Carya illinoinensis HOM05D000891 ORTHO05D000761 8.4e-10 69.3 44 70.5
Gorai.010G146600 Gossypium raimondii HOM05D000891 ORTHO05D000761 8.4e-10 69.3 47 70.2
PGR042G0713 Punica granatum HOM05D000891 ORTHO05D000761 1.1e-09 68.9 45 68.9
QL05p077799 Quercus lobata HOM05D000891 ORTHO05D000761 1.1e-09 68.9 51 60.8
Haze_06658 Corylus avellana HOM05D000891 ORTHO05D000761 1.4e-09 68.6 51 60.8
Cfa000283 Carpinus fangiana HOM05D000891 ORTHO05D000761 3.2e-09 67.4 50 60.0
Lj2P276T46 Lonicera japonica HOM05D000891 ORTHO05D000761 4.2e-09 67.0 50 60.0
Lalb_Chr18g0060101 Lupinus albus HOM05D000891 ORTHO05D000761 4.2e-09 67.0 45 66.7
Oeu038199.2 Olea europaea HOM05D000891 ORTHO05D000761 4.2e-09 67.0 51 54.9
Lalb_Chr05g0218021 Lupinus albus HOM05D000891 ORTHO05D000761 5.5e-09 66.6 45 71.1
CSS0004203 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 7.1e-09 66.2 51 60.8
CSS0044407 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 7.1e-09 66.2 51 60.8
Dinv17858 Davidia involucrata HOM05D000891 ORTHO05D000761 7.1e-09 66.2 50 60.0
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 7.1e-09 66.2 81 46.9
VMungo0251G1977 Vigna mungo HOM05D000891 ORTHO05D000761 7.1e-09 66.2 45 66.7
Nitab4.5_0000425g0250 Nicotiana tabacum HOM05D000891 ORTHO05D000761 9.3e-09 65.9 51 58.8
Lalb_Chr09g0327201 Lupinus albus HOM05D000891 ORTHO05D000761 1.2e-08 65.5 45 66.7
TAR626G0803 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.6e-08 65.1 51 56.9
TAR627G1176 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.6e-08 65.1 51 56.9
Atru.chr10.2083 Acer truncatum HOM05D000891 ORTHO05D000761 2.1e-08 64.7 231 58.0
FvH4_3g03080 Fragaria vesca HOM05D000891 ORTHO05D000761 2.1e-08 64.7 54 55.6
Phvul.002G219400 Phaseolus vulgaris HOM05D000891 ORTHO05D000761 2.1e-08 64.7 45 62.2
VMungo0251G3555 Vigna mungo HOM05D000891 ORTHO05D000761 2.1e-08 64.7 54 57.4
Dinv17857 Davidia involucrata HOM05D000891 ORTHO05D000761 2.7e-08 64.3 51 58.8
THA.LOC104810572 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 2.7e-08 64.3 45 64.4
arahy.Tifrunner.gnm1.ann1.2DT13A Arachis hypogaea HOM05D000891 ORTHO05D000761 3.5e-08 63.9 45 62.2
arahy.Tifrunner.gnm1.ann1.PL0MZ0 Arachis hypogaea HOM05D000687 ORTHO05D000761 3.5e-08 63.9 45 62.2
Eucgr.E03611 Eucalyptus grandis HOM05D000891 ORTHO05D000761 3.5e-08 63.9 231 74.0
Sc03g0001890 Simmondsia chinensis HOM05D000891 ORTHO05D000761 3.5e-08 63.9 45 62.2
EL10As6g23660 Beta vulgaris HOM05D000022 ORTHO05D000071 4.6e-08 63.5 51 56.9
Lsat_1_v5_gn_7_18561 Lactuca sativa HOM05D000891 ORTHO05D000761 4.6e-08 63.5 48 58.3
Peaxi162Scf00180g00114 Petunia axillaris HOM05D000891 ORTHO05D000761 4.6e-08 63.5 51 56.9
Aa31LG10G290 Aethionema arabicum HOM05D000891 ORTHO05D000761 7.9e-08 62.8 80 42.5
Glyma.07G187800 Glycine max HOM05D000891 ORTHO05D000761 7.9e-08 62.8 45 60.0
Nitab4.5_0003045g0010 Nicotiana tabacum HOM05D000891 ORTHO05D000761 7.9e-08 62.8 48 62.5
AT1G55890 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 1.0e-07 62.4 80 45.0
CiPaw.16G021100 Carya illinoinensis HOM05D000891 ORTHO05D000761 1.3e-07 62.0 45 62.2
Glyma.08G061500 Glycine max HOM05D000891 ORTHO05D000761 1.3e-07 62.0 45 57.8
Psat7g107640 Pisum sativum HOM05D000891 ORTHO05D000761 1.3e-07 62.0 54 55.6
TWI38G0473 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.3e-07 62.0 229 73.8
Carub.0001s4448 Capsella rubella HOM05D000891 ORTHO05D000761 2.3e-07 61.2 80 45.0
CARHR045600 Cardamine hirsuta HOM05D000891 ORTHO05D000761 2.3e-07 61.2 80 45.0
Nitab4.5_0000503g0110 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.3e-07 61.2 51 52.9
Nitab4.5_0001586g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.0e-07 60.8 50 60.0
Peaxi162Scf00390g00015 Petunia axillaris HOM05D000891 ORTHO05D000761 3.0e-07 60.8 50 60.0
Actinidia05551 Actinidia chinensis HOM05D000891 ORTHO05D000761 3.9e-07 60.5 48 60.4
Ciclev10015628m.g Citrus clementina HOM05D000891 ORTHO05D000761 3.9e-07 60.5 43 72.1
Lj2P276T41 Lonicera japonica HOM05D000891 ORTHO05D000761 3.9e-07 60.5 46 60.9
Nitab4.5_0005140g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.9e-07 60.5 51 49.0
CAN.G424.88 Capsicum annuum HOM05D000891 ORTHO05D000761 5.1e-07 60.1 45 60.0
Cc02_g11880 Coffea canephora HOM05D000891 ORTHO05D000761 5.1e-07 60.1 47 59.6
vmacro03743 Vaccinium macrocarpon HOM05D000891 ORTHO05D000761 5.1e-07 60.1 48 60.4
GSVIVG01005273001 Vitis vinifera HOM05D000891 ORTHO05D000761 5.1e-07 60.1 48 58.3
CAN.G424.89 Capsicum annuum HOM05D000891 ORTHO05D000761 6.7e-07 59.7 50 54.0
Peaxi162Scf00931g00051 Petunia axillaris HOM05D000891 ORTHO05D000761 6.7e-07 59.7 45 55.6
Psat4g188040 Pisum sativum HOM05D000002 ORTHO05D000047 6.7e-07 59.7 76 47.4
Solyc02g079830.1 Solanum lycopersicum HOM05D000891 ORTHO05D000761 6.7e-07 59.7 45 60.0
Sopen02g024600 Solanum pennellii HOM05D000891 ORTHO05D000761 6.7e-07 59.7 45 60.0
ECA236G1633 Erigeron canadensis HOM05D000891 ORTHO05D000761 8.7e-07 59.3 51 51.0
FAN25G2188 Fragaria x ananassa HOM05D000891 ORTHO05D000761 8.7e-07 59.3 41 61.0
HanXRQChr16g0517071 Helianthus annuus HOM05D000891 ORTHO05D000761 8.7e-07 59.3 44 59.1
Sp1g41490 Schrenkiella parvula HOM05D000891 ORTHO05D000761 8.7e-07 59.3 80 43.8
VMungo0251G0138 Vigna mungo HOM05D000891 ORTHO05D000761 8.7e-07 59.3 45 62.2
SHI02374 Sapria himalayana HOM05D000891 ORTHO05D000761 1.1e-06 58.9 51 51.0
Cc02_g11900 Coffea canephora HOM05D000891 ORTHO05D000761 1.5e-06 58.5 44 54.5
Nn1g03756 Nelumbo nucifera HOM05D000891 ORTHO05D000761 1.5e-06 58.5 51 52.9
TWI38G1619 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.5e-06 58.5 39 66.7
Gohir.A10G017600 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.9e-06 58.2 38 63.2
Gohir.D10G017675 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.9e-06 58.2 38 63.2
Gohir.D10G017800 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.9e-06 58.2 38 63.2
Gorai.011G019800 Gossypium raimondii HOM05D000891 ORTHO05D000761 1.9e-06 58.2 38 63.2
Lj4g0025468 Lotus japonicus HOM05D000891 ORTHO05D000761 1.9e-06 58.2 45 55.6
Manes.17G030600 Manihot esculenta HOM05D000891 ORTHO05D000761 1.9e-06 58.2 51 51.0
Nn7g36379 Nelumbo nucifera HOM05D000891 ORTHO05D000761 1.9e-06 58.2 51 52.9
Nitab4.5_0002544g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.9e-06 58.2 46 60.9
RcHm_v2.0_Chr5g0004781 Rosa chinensis HOM05D000891 ORTHO05D000761 1.9e-06 58.2 49 57.1
PGSC0003DMG400021712 Solanum tuberosum HOM05D000891 ORTHO05D000761 1.9e-06 58.2 51 52.9
Actinidia05549 Actinidia chinensis HOM05D000891 ORTHO05D000761 2.5e-06 57.8 52 55.8
CANSAT56G1279 Cannabis sativa HOM05D000891 ORTHO05D000761 2.5e-06 57.8 50 54.0
Cc02_g11890 Coffea canephora HOM05D000891 ORTHO05D000761 2.5e-06 57.8 41 61.0
Duzib235G1047 Durio zibethinus HOM05D000891 ORTHO05D000761 2.5e-06 57.8 47 55.3
Eucgr.D00875 Eucalyptus grandis HOM05D000891 ORTHO05D000761 2.5e-06 57.8 51 51.0
PGSC0003DMG400021711 Solanum tuberosum HOM05D000891 ORTHO05D000761 2.5e-06 57.8 232 69.4
Nitab4.5_0000900g0170 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.3e-06 57.4 50 46.0
Nitab4.5_0001586g0050 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.3e-06 57.4 46 58.7
PGR004G0220 Punica granatum HOM05D000891 ORTHO05D000761 3.3e-06 57.4 51 43.1
Sed0012246 Sechium edule HOM05D000891 ORTHO05D000761 3.3e-06 57.4 51 47.1
Sed0024534 Sechium edule HOM05D000891 ORTHO05D000761 3.3e-06 57.4 51 51.0
C01p51930 Brassica napus HOM05D000891 ORTHO05D000761 4.3e-06 57.0 51 51.0
BolC1t05140H Brassica oleracea HOM05D000891 ORTHO05D000761 4.3e-06 57.0 51 51.0
Lsat_1_v5_gn_4_58301 Lactuca sativa HOM05D000891 ORTHO05D000761 4.3e-06 57.0 58 50.0
TWI38G2318 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 4.3e-06 57.0 47 55.3
Ca_18462_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 5.7e-06 56.6 45 55.6
Ca_29634_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 5.7e-06 56.6 45 55.6
Rhsim13G0163100 Rhododendron simsii HOM05D000891 ORTHO05D000761 5.7e-06 56.6 38 68.4
Thhalv10011551m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 7.4e-06 56.2 80 42.5
SalBow5G3563 Salvia bowleyana HOM05D000891 ORTHO05D000761 7.4e-06 56.2 57 49.1
A01p40390 Brassica napus HOM05D000891 ORTHO05D000761 9.6e-06 55.8 45 53.3
BraA01t04074Z Brassica rapa HOM05D000891 ORTHO05D000761 9.6e-06 55.8 45 53.3
Thhalv10020883m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 9.6e-06 55.8 45 53.3
Rhsim13G0163200 Rhododendron simsii HOM05D000891 ORTHO05D000761 9.6e-06 55.8 45 51.1
Sabra05G0099200 Salix brachista HOM05D003144 ORTHO05D003539 9.6e-06 55.8 63 42.9
Sp3g11330 Schrenkiella parvula HOM05D000891 ORTHO05D000761 9.6e-06 55.8 45 55.6
Sc17g0006880 Simmondsia chinensis HOM05D000891 ORTHO05D000761 9.6e-06 55.8 51 54.9
Sopen02g024590 Solanum pennellii HOM05D000891 ORTHO05D000761 9.6e-06 55.8 45 57.8


User provided reference genes

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