Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 7.7e-192 673.7 352 100.0
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 7.7e-192 673.7 352 100.0
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 1.1e-182 643.3 354 94.9
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 7.0e-137 491.1 357 72.0
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 6.0e-136 488.0 347 72.9
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.9e-134 483.0 345 71.9
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 3.5e-128 462.2 355 68.7
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 3.5e-128 462.2 350 68.3
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 4.6e-128 461.8 356 68.3
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.0e-127 460.7 355 69.0
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 1.9e-126 456.4 348 69.0
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 4.7e-125 451.8 351 67.0
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 1.1e-124 450.7 353 69.1
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.4e-124 450.3 369 64.2
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 2.3e-124 449.5 345 69.0
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.0e-124 448.7 343 67.6
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 5.2e-124 448.4 316 71.5
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 8.9e-124 447.6 317 71.6
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 1.5e-123 446.8 353 67.1
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 2.0e-123 446.4 350 66.9
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 4.4e-123 445.3 357 66.1
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.7e-122 443.4 350 65.1
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 2.2e-122 443.0 344 66.6
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 2.9e-122 442.6 316 71.2
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.7e-122 442.2 354 67.5
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.9e-122 441.8 353 66.0
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 1.1e-121 440.7 355 68.2
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.9e-121 439.9 352 64.8
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 7.1e-121 438.0 352 67.0
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.2e-120 437.2 352 66.2
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.6e-120 436.8 352 65.3
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 4.6e-120 435.3 344 64.5
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 7.8e-120 434.5 349 64.8
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.0e-119 434.1 351 63.0
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 1.0e-119 434.1 312 69.6
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.7e-119 433.3 350 65.7
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 1.7e-119 433.3 317 69.7
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 5.1e-119 431.8 344 64.2
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 6.6e-119 431.4 353 64.9
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.1e-118 430.6 353 65.2
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.5e-118 430.3 353 65.2
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.9e-118 429.9 343 63.3
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 5.6e-118 428.3 314 69.4
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 5.6e-118 428.3 312 67.6
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 5.6e-118 428.3 312 67.6
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 7.3e-118 427.9 336 64.0
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 7.3e-118 427.9 317 69.1
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 9.6e-118 427.6 316 69.0
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.1e-117 426.4 351 64.4
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.1e-117 426.4 316 69.0
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 4.7e-117 425.2 351 63.2
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 4.7e-117 425.2 311 67.2
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 8.1e-117 424.5 353 63.5
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 1.4e-116 423.7 346 63.6
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 1.4e-116 423.7 346 63.6
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 2.4e-116 422.9 353 63.5
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 2.4e-116 422.9 353 63.5
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.4e-116 422.9 314 66.9
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 5.2e-116 421.8 350 63.7
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.2e-115 420.6 316 68.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 2.0e-115 419.9 314 67.2
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 2.0e-115 419.9 353 62.0
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.6e-115 419.5 353 65.4
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 3.4e-115 419.1 414 58.2
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.8e-115 418.3 352 62.8
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.7e-114 416.8 312 67.9
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 2.9e-114 416.0 343 62.4
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.8e-114 415.6 317 68.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 3.8e-114 415.6 355 62.0
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.9e-113 413.3 355 63.7
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 4.2e-113 412.1 351 63.0
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 4.2e-113 412.1 351 63.0
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 4.2e-113 412.1 351 63.0
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 5.4e-113 411.8 353 62.0
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 9.3e-113 411.0 317 67.2
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 1.7e-111 406.8 354 60.7
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.0e-111 406.0 349 61.9
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 3.9e-111 405.6 354 61.3
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.5e-110 403.7 346 61.0
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 5.6e-110 401.7 316 65.5
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 4.8e-109 398.7 353 61.2
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 6.2e-109 398.3 350 62.6
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.1e-109 397.9 353 60.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 1.1e-108 397.5 318 62.3
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.2e-107 394.0 353 60.6
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 3.4e-107 392.5 353 60.6
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 1.3e-106 390.6 308 68.2
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 7.1e-105 384.8 315 61.3
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.6e-104 383.6 312 64.7
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.0e-104 381.7 355 57.5
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 6.0e-104 381.7 355 57.5
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.0e-103 380.9 344 58.4
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.0e-103 380.9 316 62.3
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.7e-103 380.2 354 61.0
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 3.9e-103 379.0 340 57.9
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 5.1e-103 378.6 314 60.8
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 7.4e-102 374.8 349 59.3
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.1e-101 371.3 344 58.7
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.5e-99 367.1 351 56.7
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 5.8e-99 365.2 336 59.5
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.9e-98 362.8 340 56.2
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 3.8e-98 362.5 345 56.8
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.7e-96 356.3 354 54.2
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 6.0e-96 355.1 348 56.3
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 6.0e-96 355.1 311 59.2
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.3e-95 354.0 314 58.3
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.8e-95 353.6 337 56.1
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 4.3e-94 349.0 315 58.4
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 9.6e-94 347.8 314 57.3
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 8.1e-93 344.7 267 66.3
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 1.1e-92 344.4 270 64.8
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.4e-92 343.2 290 65.5
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 1.2e-91 340.9 331 58.6
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 1.7e-90 337.0 314 57.3
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 8.4e-90 334.7 352 52.8
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 5.5e-89 332.0 314 52.2
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 6.0e-88 328.6 349 50.4
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.7e-87 325.1 317 51.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.1e-86 324.3 349 49.9
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.5e-86 323.2 315 52.1
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 7.4e-86 321.6 349 49.3
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.6e-85 320.5 304 56.6
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 2.8e-85 319.7 263 62.0
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 8.2e-85 318.2 270 64.8
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 8.2e-85 318.2 312 53.8
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.4e-84 316.6 346 51.7
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.1e-84 315.8 342 52.3
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 5.3e-84 315.5 338 51.2
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.2e-83 314.3 344 52.0
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-83 313.2 336 52.7
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 4.5e-83 312.4 342 51.8
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 1.0e-82 311.2 357 49.0
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 2.9e-82 309.7 339 49.9
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 2.9e-82 309.7 339 49.9
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 1.1e-81 307.8 315 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.5e-81 306.6 315 51.4
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.2e-81 306.2 317 49.2
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 4.2e-81 305.8 288 58.0
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 5.5e-81 305.4 337 50.1
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 1.3e-79 300.8 317 50.5
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.9e-78 297.0 352 46.3
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.7e-78 294.7 268 57.5
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 9.7e-78 294.7 330 46.1
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 8.2e-77 291.6 189 71.4
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.6e-75 286.6 316 48.4
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.2e-73 279.3 249 58.6
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.3e-71 273.5 191 67.5
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 6.7e-71 271.9 268 56.0
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.5e-70 270.8 179 70.4
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 2.0e-70 270.4 189 69.3
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.2e-65 253.1 189 64.6
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.2e-65 251.9 189 60.8
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 8.8e-63 245.0 345 43.8
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.1e-60 238.0 182 64.8
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 2.1e-56 223.8 226 56.2
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 2.3e-55 220.3 190 54.7
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.5e-54 217.6 233 49.8
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 3.5e-51 206.5 347 38.3
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.2e-50 203.8 184 54.9
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 1.1e-49 201.4 226 51.3
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 1.4e-47 194.5 155 64.5
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 8.3e-45 185.3 336 35.4
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 3.6e-40 169.9 172 56.4
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 4.5e-35 152.9 162 53.1
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 6.1e-32 142.5 172 47.7
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 8.9e-31 138.7 92 71.7
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 1.5e-30 137.9 104 67.3
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 1.0e-26 125.2 95 63.2
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 2.8e-24 117.1 348 29.6
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 6.8e-23 112.5 77 70.1
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 1.5e-22 111.3 89 62.9
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 7.8e-19 99.0 81 56.8
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 2.3e-18 97.4 80 58.8
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 6.6e-18 95.9 76 60.5
SMO351G0034 Selaginella moellendorffii HOM05D003755 ORTHO05D376906 1.6e-16 91.3 302 27.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 2.8e-16 90.5 75 61.3
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 3.7e-13 80.1 48 77.1
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 6.4e-13 79.3 54 70.4
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-12 78.6 74 58.1
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 2.4e-12 77.4 57 61.4
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 3.2e-12 77.0 98 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.1e-07 62.0 76 46.1


User provided reference genes

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