Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-66 254.6 119 100.0
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 6.0e-64 247.3 119 97.5
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 7.8e-64 246.9 118 97.5
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-62 241.5 118 94.9
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-62 241.5 118 94.9
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-61 239.6 118 94.1
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-61 239.6 119 94.1
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-61 238.4 117 94.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 6.2e-61 237.3 119 93.3
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-60 235.7 119 92.4
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 8.4e-58 226.9 117 88.9
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-54 214.9 117 86.3
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-54 214.9 117 86.3
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-53 213.0 119 81.5
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.8e-53 211.8 119 81.5
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 6.9e-52 207.2 108 89.8
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.4e-51 204.5 119 77.3
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.6e-46 187.6 117 71.8
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.3e-30 135.2 114 55.3
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.3e-30 135.2 114 55.3
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.2e-25 117.5 114 50.0
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 4.1e-20 101.7 120 45.0
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.3e-20 101.3 113 45.1
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 1.0e-18 97.1 120 44.2
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.5e-17 92.4 111 45.0
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 9.4e-17 90.5 116 41.4
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-15 86.7 102 39.2
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-15 86.3 105 43.8
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 3.9e-15 85.1 114 36.0
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-14 83.6 110 37.3
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-14 82.8 114 35.1
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-14 82.0 105 41.9
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.2e-13 79.3 105 41.9
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 4.8e-13 78.2 105 41.0
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 6.3e-13 77.8 123 39.8
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-12 76.3 122 40.2
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 5.3e-12 74.7 84 46.4
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.2e-11 73.6 92 41.3
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 4.5e-11 71.6 89 42.7
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-10 70.5 103 35.9
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-10 70.5 103 35.9
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-10 70.5 108 36.1
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 1.0e-10 70.5 95 40.0
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.3e-10 70.1 92 39.1
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.2e-10 69.3 92 39.1
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 8.5e-10 67.4 107 32.7
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.1e-09 67.0 90 40.0
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 1.1e-09 67.0 93 41.9
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-09 66.6 107 31.8
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-09 66.2 100 34.0
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-09 66.2 93 39.8
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 3.2e-09 65.5 111 36.0
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 4.2e-09 65.1 111 36.0
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 4.2e-09 65.1 111 36.0
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.5e-09 64.7 106 33.0
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.5e-09 64.7 113 32.7
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.4e-09 63.9 110 32.7
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.6e-08 63.2 105 36.2
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 1.6e-08 63.2 93 39.8
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 103 35.9
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 103 35.9
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 96 33.3
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 2.1e-08 62.8 112 35.7
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 2.7e-08 62.4 106 37.7
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-08 62.4 87 34.5
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 3.6e-08 62.0 106 37.7
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 3.6e-08 62.0 113 35.4
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 4.7e-08 61.6 112 35.7
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 6.1e-08 61.2 89 34.8
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 7.9e-08 60.8 114 33.3
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 116 32.8
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-07 59.7 89 33.7
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-07 59.7 84 34.5
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 2.3e-07 59.3 95 35.8
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-07 59.3 89 34.8
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-07 58.2 91 35.2
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 1.1e-06 57.0 110 33.6
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-06 57.0 114 34.2
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 1.5e-06 56.6 109 32.1
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 2.0e-06 56.2 110 27.3
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-06 56.2 106 31.1
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.3e-06 55.5 90 34.4
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-06 55.1 101 29.7
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 5.7e-06 54.7 113 28.3
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 5.7e-06 54.7 106 31.1
Atru.chr2.68 Acer truncatum HOM05D002599 ORTHO05D001895 7.4e-06 54.3 86 34.9
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 9.7e-06 53.9 83 41.0
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 9.7e-06 53.9 63 41.3
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 9.7e-06 53.9 107 34.6


User provided reference genes

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