Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.3e-76 289.7 146 100.0
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.1e-71 272.3 146 95.2
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.1e-56 223.4 158 74.7
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 5.8e-53 211.1 159 69.8
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 2.4e-51 205.7 154 68.2
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 4.2e-51 204.9 151 72.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 5.5e-51 204.5 157 70.7
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 7.1e-51 204.1 148 72.3
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 7.1e-51 204.1 149 71.1
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 4.6e-50 201.4 150 72.7
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 6.0e-50 201.1 151 69.5
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 7.9e-50 200.7 160 66.9
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.0e-49 200.3 157 67.5
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.3e-49 199.9 149 69.1
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 3.9e-49 198.4 162 68.5
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 1.9e-48 196.1 158 65.2
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 2.5e-48 195.7 144 66.0
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 3.3e-48 195.3 150 69.3
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.3e-48 194.9 148 67.6
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 9.6e-48 193.7 160 63.8
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 1.3e-47 193.4 159 67.9
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.3e-47 193.4 146 67.1
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.6e-47 193.0 148 68.2
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 2.1e-47 192.6 147 67.3
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 2.8e-47 192.2 158 68.4
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 4.8e-47 191.4 155 65.2
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 6.2e-47 191.0 146 66.4
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 8.2e-47 190.7 147 69.4
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.4e-46 189.9 146 67.8
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.8e-46 189.5 126 77.8
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.1e-46 188.7 148 66.9
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 4.0e-46 188.3 146 66.4
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 4.0e-46 188.3 148 64.2
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.5e-45 186.4 160 61.9
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.0e-45 186.0 146 66.4
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 2.6e-45 185.7 123 74.8
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 2.6e-45 185.7 123 74.8
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 2.6e-45 185.7 154 66.2
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 2.6e-45 185.7 152 65.1
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.4e-45 185.3 155 63.9
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 5.8e-45 184.5 152 64.5
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.0e-44 183.7 158 65.2
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.0e-44 183.7 136 66.9
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 3.8e-44 181.8 148 66.2
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 3.8e-44 181.8 153 64.7
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.1e-43 180.3 144 68.8
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.4e-43 179.9 125 71.2
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.4e-43 179.9 132 70.5
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 1.9e-43 179.5 161 60.9
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 1.9e-43 179.5 147 65.3
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 3.2e-43 178.7 154 66.2
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 4.2e-43 178.3 146 63.0
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 7.1e-43 177.6 159 61.0
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 7.1e-43 177.6 158 59.5
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 9.3e-43 177.2 124 74.2
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 1.2e-42 176.8 147 62.6
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.6e-42 176.4 163 60.7
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.6e-42 176.4 143 62.2
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.6e-42 176.4 143 62.2
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.6e-42 176.4 154 62.3
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.6e-42 176.4 154 62.3
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.1e-42 176.0 146 61.6
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 3.5e-42 175.3 143 62.2
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 6.0e-42 174.5 150 61.3
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.3e-41 173.3 152 61.8
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 2.3e-41 172.6 140 62.1
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 5.1e-41 171.4 121 70.2
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 6.7e-41 171.0 168 57.7
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 6.7e-41 171.0 143 65.7
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 6.7e-41 171.0 126 69.0
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.1e-40 170.2 147 59.9
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 1.1e-40 170.2 118 71.2
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.5e-40 169.9 155 59.4
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.5e-40 169.1 122 71.3
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.3e-40 168.7 122 70.5
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 5.7e-40 167.9 150 55.3
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 7.4e-40 167.5 145 59.3
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 7.4e-40 167.5 149 62.4
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.8e-39 165.6 122 68.9
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 4.8e-39 164.9 129 66.7
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 4.8e-39 164.9 129 66.7
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.8e-39 164.9 105 71.4
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 1.4e-38 163.3 129 66.7
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 1.4e-38 163.3 129 66.7
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.4e-38 163.3 121 65.3
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 4.1e-38 161.8 103 76.7
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 9.0e-38 160.6 148 60.1
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.2e-37 160.2 147 57.8
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 8.5e-36 154.1 142 55.6
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 4.6e-34 148.3 151 53.6
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 3.9e-33 145.2 99 70.7
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 6.7e-33 144.4 142 54.2
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.7e-33 144.4 119 60.5
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.9e-32 142.9 108 66.7
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 2.5e-32 142.5 104 68.3
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 2.5e-32 142.5 154 50.6
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 4.3e-32 141.7 103 68.0
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 4.8e-31 138.3 87 75.9
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.1e-30 137.1 116 60.3
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.6e-29 132.5 101 60.4
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 5.9e-29 131.3 122 55.7
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.5e-28 127.9 100 61.0
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.7e-23 112.1 122 50.8
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 1.2e-21 107.1 87 64.4
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 2.0e-21 106.3 74 66.2
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 3.2e-19 99.0 78 52.6
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 2.0e-13 79.7 77 50.6
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 1.5e-11 73.6 88 42.0
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 2.5e-11 72.8 82 46.3
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.2e-10 70.5 100 35.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 3.0e-09 65.9 127 29.1


User provided reference genes

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