Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 8.8e-184 646.7 308 100.0
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 1.8e-168 595.9 308 92.9
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 6.9e-104 381.3 315 63.8
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.5e-98 362.8 292 63.4
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 5.6e-98 361.7 268 66.8
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 1.3e-97 360.5 302 61.3
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 2.8e-97 359.4 313 59.1
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 4.0e-96 355.5 318 58.5
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 5.8e-95 351.7 269 63.2
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 1.3e-94 350.5 271 62.7
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 1.7e-94 350.1 277 62.8
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 4.9e-94 348.6 326 54.9
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.1e-93 347.4 312 57.7
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.2e-92 344.0 302 58.6
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 6.0e-92 341.7 298 58.1
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.8e-91 340.1 291 59.1
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 2.3e-91 339.7 282 59.9
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 3.9e-91 339.0 257 63.0
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 3.9e-91 339.0 310 55.8
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 8.7e-91 337.8 282 60.3
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 1.9e-90 336.7 282 59.6
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.9e-90 336.7 265 62.6
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 3.3e-90 335.9 307 57.0
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 5.6e-90 335.1 296 57.8
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 5.6e-90 335.1 296 57.8
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 7.4e-90 334.7 296 57.4
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.3e-89 334.0 298 57.4
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 1.6e-89 333.6 255 62.0
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 2.1e-89 333.2 251 63.7
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 2.8e-89 332.8 302 57.0
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 4.8e-89 332.0 302 56.6
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.1e-88 330.9 250 62.8
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.8e-88 330.1 350 52.6
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 1.8e-88 330.1 265 60.0
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 3.1e-88 329.3 308 55.8
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 3.1e-88 329.3 263 60.5
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 4.0e-88 328.9 288 55.6
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 5.3e-88 328.6 305 58.4
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 6.9e-88 328.2 265 60.8
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 9.0e-88 327.8 307 55.0
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 2.6e-87 326.2 318 58.2
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 2.6e-87 326.2 265 60.0
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 3.4e-87 325.9 301 54.8
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 5.8e-87 325.1 251 60.2
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 5.8e-87 325.1 267 59.2
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 7.6e-87 324.7 251 60.2
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 7.6e-87 324.7 261 60.9
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 1.0e-86 324.3 293 55.3
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 1.1e-85 320.9 293 56.3
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.5e-85 319.7 250 59.2
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.2e-85 319.3 253 61.7
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 3.2e-85 319.3 287 57.1
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 3.2e-85 319.3 237 65.4
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 4.2e-85 318.9 259 60.6
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 4.2e-85 318.9 304 54.3
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.2e-84 317.4 256 59.4
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.6e-84 317.0 280 58.9
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 2.1e-84 316.6 256 59.4
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 3.5e-84 315.8 280 58.6
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 4.6e-84 315.5 280 58.9
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 4.6e-84 315.5 251 59.8
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 1.0e-83 314.3 266 56.0
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.0e-83 314.3 277 56.7
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 2.3e-83 313.2 252 61.1
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 4.3e-82 308.9 258 60.1
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 5.7e-82 308.5 252 61.5
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 2.2e-81 306.6 232 62.5
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 6.3e-81 305.1 288 55.9
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 2.9e-78 296.2 281 54.1
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 1.1e-77 294.3 267 55.1
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.9e-77 293.5 320 52.2
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 4.2e-77 292.4 279 54.5
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 3.6e-76 289.3 304 51.6
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 1.4e-72 277.3 294 53.1
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 2.7e-68 263.1 258 50.4
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 1.8e-67 260.4 272 52.6
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 2.3e-67 260.0 252 54.4
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 5.7e-66 255.4 204 57.8
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 4.8e-65 252.3 262 52.7
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 6.3e-65 251.9 272 50.0
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 4.2e-61 239.2 277 48.7
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 9.7e-58 228.0 205 55.6
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.8e-51 207.2 261 47.5
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 4.0e-51 206.1 180 53.9
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 4.8e-49 199.1 133 68.4
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 4.0e-43 179.5 268 38.4
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 9.1e-40 168.3 252 40.1
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 5.9e-39 165.6 192 49.0
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 2.3e-38 163.7 106 67.0
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.2e-36 157.9 257 37.7
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.6e-36 157.5 103 68.0
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.0e-35 154.8 175 52.6
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.2e-34 151.4 235 37.0
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 9.2e-32 141.7 81 72.8
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.3e-27 127.1 86 66.3
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 2.3e-22 110.5 266 29.3
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 2.3e-22 110.5 84 57.1
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 2.5e-21 107.1 61 75.4
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 4.7e-20 102.8 150 44.7
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 3.4e-18 96.7 50 78.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.4e-18 96.7 50 78.0
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.9e-13 80.9 96 52.1
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 2.8e-12 77.0 60 56.7
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 3.1e-11 73.6 73 53.4
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 3.1e-11 73.6 73 53.4
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 2.4e-08 63.9 58 51.7
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 2.4e-08 63.9 58 51.7
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 5.4e-08 62.8 54 55.6
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 2.1e-07 60.8 62 41.9
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 5.1e-06 56.2 32 75.0
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 6.6e-06 55.8 44 52.3


User provided reference genes

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