Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 4.2e-150 534.6 267 100.0
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 3.9e-140 501.5 266 93.2
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.1e-89 334.0 272 63.2
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 4.6e-88 328.6 287 61.3
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 5.1e-87 325.1 279 60.2
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 2.5e-86 322.8 279 60.6
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 6.2e-85 318.2 277 60.6
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 2.4e-84 316.2 274 59.9
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 1.5e-83 313.5 272 62.5
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 1.5e-83 313.5 272 59.6
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 4.4e-83 312.0 278 59.0
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 5.8e-83 311.6 273 61.5
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 1.7e-82 310.1 272 61.4
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 3.8e-82 308.9 274 59.9
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 8.4e-82 307.8 276 58.0
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 1.1e-81 307.4 273 59.7
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.4e-81 307.0 272 61.0
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 2.1e-80 303.1 272 58.5
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 3.5e-80 302.4 275 58.5
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 3.5e-80 302.4 271 59.0
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 3.0e-79 299.3 274 57.7
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 3.9e-79 298.9 273 57.5
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.5e-78 297.0 286 55.2
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 5.6e-78 295.0 275 56.7
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 5.6e-78 295.0 269 56.9
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 2.1e-77 293.1 273 56.8
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 3.6e-77 292.4 269 56.9
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 6.2e-77 291.6 273 58.2
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 8.1e-77 291.2 271 57.2
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 1.8e-76 290.0 272 55.9
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.4e-76 289.7 269 58.4
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 4.0e-76 288.9 275 56.0
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 5.3e-76 288.5 271 56.8
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 9.0e-76 287.7 271 59.0
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 9.0e-76 287.7 274 58.0
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.5e-75 287.0 271 59.0
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 2.0e-75 286.6 275 56.7
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.6e-75 286.2 231 61.9
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.6e-75 286.2 272 53.7
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 4.4e-75 285.4 266 59.4
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 4.4e-75 285.4 271 54.2
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 1.3e-74 283.9 272 54.4
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.7e-74 283.5 284 54.2
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 3.8e-74 282.3 273 56.0
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 8.4e-74 281.2 276 54.3
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.1e-73 280.8 269 55.4
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.6e-72 276.9 262 58.4
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 3.5e-72 275.8 272 53.3
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 4.6e-72 275.4 271 55.4
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 4.6e-72 275.4 272 53.7
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 7.9e-72 274.6 272 57.4
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 7.9e-72 274.6 263 57.8
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 7.9e-72 274.6 261 53.3
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.0e-71 274.2 270 51.1
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 1.3e-71 273.9 270 51.1
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 1.9e-70 270.0 274 55.1
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 9.6e-70 267.7 270 52.6
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 9.6e-70 267.7 246 59.3
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 2.1e-69 266.5 271 54.2
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 2.8e-69 266.2 271 53.1
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 3.6e-69 265.8 270 52.2
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 3.6e-69 265.8 268 51.5
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 1.8e-68 263.5 270 53.7
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 4.0e-68 262.3 270 55.6
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 6.9e-68 261.5 292 51.7
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 2.0e-67 260.0 277 52.7
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 4.5e-67 258.8 274 52.9
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.7e-66 256.9 276 52.2
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 2.2e-66 256.5 271 55.0
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 2.9e-66 256.1 275 51.6
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 6.4e-66 255.0 274 52.2
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 9.3e-65 251.1 269 52.4
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 9.3e-65 251.1 270 53.0
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.2e-64 250.8 276 52.2
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 3.5e-64 249.2 269 52.0
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 3.5e-64 249.2 269 52.0
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 3.9e-63 245.7 276 52.5
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 5.1e-63 245.4 272 50.7
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 8.7e-63 244.6 269 50.6
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 2.5e-62 243.0 269 50.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 3.3e-62 242.7 227 56.4
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 4.8e-61 238.8 274 50.4
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 6.9e-60 235.0 249 53.8
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.4e-59 232.6 241 54.4
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 5.8e-59 231.9 177 66.1
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.3e-58 230.7 233 58.4
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 1.6e-56 223.8 268 48.1
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.0e-55 221.1 275 49.1
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 3.0e-55 219.5 255 51.4
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 5.1e-55 218.8 225 52.4
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 1.4e-52 210.7 275 44.4
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 6.9e-52 208.4 183 57.4
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 5.0e-50 202.2 194 54.6
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 6.3e-45 185.3 269 45.4
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.0e-43 180.3 180 54.4
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 4.6e-40 169.1 184 54.3
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 4.8e-37 159.1 219 44.7
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 4.8e-37 159.1 162 51.9
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 4.1e-36 156.0 215 47.0
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 1.7e-34 150.6 267 37.8
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 2.9e-34 149.8 244 42.2
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 7.2e-33 145.2 221 41.6
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.6e-32 142.9 274 35.4
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.8e-31 140.6 250 39.2
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.8e-28 130.6 263 37.3
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 3.5e-27 126.3 194 40.2
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 4.5e-27 125.9 261 36.8
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.7e-21 107.5 235 40.4
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 4.8e-21 105.9 80 68.8
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.4e-20 104.4 176 42.0
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 3.5e-19 99.8 200 37.5
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-17 94.7 70 67.1
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 5.9e-11 72.4 42 81.0
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 1.2e-08 64.7 55 60.0
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 3.6e-08 63.2 80 46.2
SMO112G0074 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.8e-07 60.8 168 33.9
Cre01.g033763 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 2.6e-06 57.0 58 51.7
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 9.8e-06 55.1 95 36.8


User provided reference genes

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