Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 7.1e-102 374.0 199 100.0
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 5.8e-96 354.4 199 93.5
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 4.6e-69 265.0 200 68.0
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 2.3e-68 262.7 197 68.0
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 4.1e-65 251.9 197 66.5
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 4.5e-64 248.4 155 80.6
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 1.1e-62 243.8 199 64.8
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 4.2e-62 241.9 199 62.8
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 2.1e-61 239.6 197 61.4
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 7.9e-61 237.7 199 62.8
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.8e-60 236.5 194 61.3
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 1.1e-59 233.8 199 60.8
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.5e-59 233.4 191 68.1
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 2.6e-59 232.6 198 59.1
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 1.3e-58 230.3 198 59.6
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 2.8e-58 229.2 201 61.2
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 4.8e-58 228.4 198 61.6
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 4.8e-58 228.4 201 59.7
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 4.8e-58 228.4 197 58.4
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 8.2e-58 227.6 172 65.7
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 8.2e-58 227.6 172 65.7
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 1.1e-57 227.3 200 58.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.1e-57 227.3 201 59.7
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 4.1e-57 225.3 197 55.8
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 2.0e-56 223.0 200 58.5
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 2.0e-56 223.0 140 85.0
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.0e-56 223.0 200 57.0
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 2.6e-56 222.6 201 58.7
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 7.7e-56 221.1 199 58.3
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.7e-55 219.9 200 56.0
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.9e-55 219.2 201 56.7
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 6.5e-55 218.0 200 55.5
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 8.5e-55 217.6 200 55.5
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 8.5e-55 217.6 201 58.7
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 1.4e-54 216.9 201 54.2
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 2.5e-54 216.1 170 62.9
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 2.5e-54 216.1 198 60.1
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 1.2e-53 213.8 201 58.2
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 4.7e-53 211.8 162 69.1
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 4.7e-53 211.8 200 56.0
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 7.9e-53 211.1 197 57.4
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 8.8e-52 207.6 200 53.5
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.5e-51 206.8 195 55.9
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 2.6e-51 206.1 200 57.0
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 3.3e-51 205.7 199 56.8
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 4.4e-51 205.3 186 57.5
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 5.7e-51 204.9 195 54.4
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 7.4e-51 204.5 200 57.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 1.3e-50 203.8 197 51.8
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 4.1e-49 198.7 186 55.4
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 7.0e-49 198.0 195 53.8
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.6e-48 196.8 200 51.0
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 1.6e-48 196.8 208 51.4
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 3.5e-48 195.7 192 52.6
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 3.5e-48 195.7 192 52.6
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 5.9e-48 194.9 202 53.0
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.0e-47 194.1 191 55.5
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.2e-47 193.0 197 54.8
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.0e-47 191.8 197 55.3
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.2e-46 188.7 184 55.4
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 4.7e-45 185.3 148 61.5
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.0e-44 184.1 191 53.4
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.4e-44 183.7 151 63.6
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 3.0e-44 182.6 141 61.7
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 5.2e-44 181.8 167 55.1
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 8.8e-44 181.0 200 50.5
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.2e-43 180.6 141 64.5
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.3e-43 179.1 146 59.6
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.6e-40 170.2 170 50.0
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.5e-38 163.7 173 49.1
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 5.5e-38 161.8 199 48.2
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.4e-36 157.1 187 49.2
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.6e-35 152.9 203 44.3
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 3.4e-35 152.5 199 47.2
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 4.4e-35 152.1 117 64.1
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.3e-34 150.6 132 57.6
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 5.4e-33 145.2 197 43.7
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 5.4e-33 145.2 192 44.3
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 1.2e-32 144.1 205 42.0
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.2e-32 144.1 137 54.0
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 1.6e-32 143.7 200 44.0
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 2.7e-32 142.9 206 43.2
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.0e-31 141.0 171 44.4
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.3e-31 140.6 169 46.2
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.7e-31 140.2 193 41.5
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 2.9e-31 139.4 180 46.7
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 6.5e-31 138.3 203 44.3
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 6.5e-31 138.3 207 44.4
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 6.5e-31 138.3 203 44.3
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.1e-30 137.5 207 44.4
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 4.2e-30 135.6 207 43.0
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 4.2e-30 135.6 183 41.0
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 2.3e-28 129.8 199 42.2
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 4.4e-27 125.6 202 41.1
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 3.3e-22 109.4 78 66.7
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 5.6e-22 108.6 121 47.9
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 6.8e-20 101.7 155 38.7
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 2.6e-19 99.8 120 47.5
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 2.0e-16 90.1 192 30.7
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 3.5e-16 89.4 138 34.1
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 9.5e-14 81.3 148 37.2
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 1.2e-13 80.9 148 37.2
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 7.8e-08 61.6 45 62.2


User provided reference genes

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