Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0144400 Salix brachista HOM05D003492 ORTHO05D019467 3.6e-109 398.3 205 100.0
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.9e-25 120.2 197 43.1
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 2.9e-18 96.3 190 38.4
Potri.010G187201 Populus trichocarpa HOM05D003492 ORTHO05D019467 8.8e-15 84.7 60 78.3
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 2.0e-14 83.6 131 42.7
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 8.3e-13 78.2 189 33.3
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 7.0e-12 75.1 159 35.2
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 9.2e-12 74.7 129 41.9
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 2.0e-11 73.6 188 30.9
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 5.9e-11 72.0 224 30.4
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.3e-10 70.9 126 41.3
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 1.3e-10 70.9 127 38.6
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 4.3e-09 65.9 129 36.4
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 7.3e-09 65.1 127 38.6
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 9.5e-09 64.7 126 38.1
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 9.5e-09 64.7 130 36.2
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 1.2e-08 64.3 129 35.7
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 1.2e-08 64.3 129 35.7
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 2.1e-08 63.5 129 34.9
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 4.7e-08 62.4 129 34.1
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 4.7e-08 62.4 129 34.1
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 8.0e-08 61.6 131 38.2
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 1.0e-07 61.2 129 34.1
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.0e-07 61.2 131 35.9
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.0e-07 61.2 131 35.9
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.0e-07 61.2 131 35.9
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.0e-07 61.2 131 35.9
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 1.0e-07 61.2 126 36.5
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 1.4e-07 60.8 129 35.7
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.8e-07 60.5 131 37.4
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 2.3e-07 60.1 123 35.8
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.3e-07 60.1 131 35.1
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.3e-07 60.1 125 33.6
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 2.3e-07 60.1 130 36.9
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 3.0e-07 59.7 129 35.7
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 3.0e-07 59.7 121 33.9
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 4.0e-07 59.3 129 34.1
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 4.0e-07 59.3 129 36.4
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 4.0e-07 59.3 125 32.8
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 5.2e-07 58.9 155 34.8
SHI03327 Sapria himalayana HOM05D003492 ORTHO05D000001 5.2e-07 58.9 176 29.5
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 6.8e-07 58.5 125 32.8
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 8.9e-07 58.2 159 36.5
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.2e-06 57.8 125 32.0
Lj8C65T9 Lonicera japonica HOM05D003492 ORTHO05D019467 1.5e-06 57.4 123 37.4
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 2.6e-06 56.6 125 32.0
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 4.4e-06 55.8 125 31.2
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 5.7e-06 55.5 129 32.6
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 9.8e-06 54.7 121 32.2


User provided reference genes

Program Settings