Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 8.8e-182 640.2 332 100.0
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.6e-151 539.7 332 86.1
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 2.3e-113 412.9 335 62.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 3.6e-98 362.5 335 58.8
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 3.0e-97 359.4 303 62.7
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.5e-96 357.1 327 56.9
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 8.2e-95 351.3 335 56.7
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 4.5e-93 345.5 334 56.6
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 5.9e-93 345.1 335 54.9
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 1.0e-92 344.4 323 57.6
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.7e-92 343.6 316 59.5
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.2e-92 343.2 316 59.5
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.1e-91 340.9 334 56.9
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.6e-90 337.0 334 55.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.6e-90 337.0 346 54.3
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 4.7e-90 335.5 338 54.7
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 4.7e-90 335.5 340 54.1
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 6.1e-90 335.1 348 54.0
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 3.9e-89 332.4 268 63.8
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 5.2e-89 332.0 336 56.0
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 4.4e-88 328.9 309 58.9
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 4.8e-87 325.5 335 53.1
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.1e-86 324.3 335 53.4
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.1e-86 324.3 335 53.4
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 2.4e-86 323.2 336 53.0
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.1e-86 322.8 331 54.1
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 4.1e-86 322.4 266 62.0
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 4.1e-86 322.4 333 52.6
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.1e-86 322.4 333 52.6
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.3e-86 322.0 333 52.6
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 9.1e-86 321.2 331 53.5
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.2e-85 320.9 253 62.5
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.2e-85 320.9 331 54.1
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 2.6e-85 319.7 253 62.1
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 2.6e-85 319.7 336 53.0
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 2.6e-85 319.7 303 55.1
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 3.5e-85 319.3 253 61.7
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 3.5e-85 319.3 253 61.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.5e-85 319.3 298 56.0
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 4.5e-85 318.9 253 61.7
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 5.9e-85 318.5 314 52.9
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 7.7e-85 318.2 275 59.6
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.2e-84 316.6 263 61.2
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 3.8e-84 315.8 315 53.3
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.5e-84 314.7 308 54.2
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.1e-83 314.3 334 52.1
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.1e-83 314.3 333 50.8
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 1.1e-83 314.3 271 59.0
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.5e-83 313.2 346 51.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 4.2e-83 312.4 300 56.7
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.2e-82 310.8 256 59.4
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.6e-82 310.5 332 52.4
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 1.6e-82 310.5 247 62.8
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.6e-82 309.3 273 60.1
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.6e-82 309.3 315 54.0
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 4.7e-82 308.9 276 58.0
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 4.7e-82 308.9 254 61.0
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 8.0e-82 308.1 268 57.5
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 8.0e-82 308.1 258 59.7
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.0e-81 307.8 273 59.7
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.0e-81 307.8 276 57.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 2.3e-81 306.6 296 54.7
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 3.0e-81 306.2 282 55.3
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.0e-81 305.8 239 66.1
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 5.2e-81 305.4 386 46.1
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 5.2e-81 305.4 266 57.1
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 6.7e-81 305.1 299 54.8
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 1.5e-80 303.9 254 59.8
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 2.0e-80 303.5 254 59.8
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 4.4e-80 302.4 282 55.0
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 4.4e-80 302.4 305 53.8
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 7.5e-80 301.6 266 58.3
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.3e-79 300.8 260 59.2
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 3.7e-79 299.3 253 60.9
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.4e-78 297.4 253 59.7
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 4.1e-78 295.8 259 57.1
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 9.1e-78 294.7 248 58.1
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.2e-77 294.3 272 54.4
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 5.9e-77 292.0 261 57.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.0e-76 291.2 295 54.2
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.9e-76 289.7 254 57.1
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 3.8e-76 289.3 275 54.9
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 3.8e-76 289.3 254 57.1
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 5.0e-76 288.9 248 58.1
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 8.5e-76 288.1 269 56.1
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.1e-75 287.7 246 58.1
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.5e-75 286.6 269 56.1
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.2e-74 284.3 259 54.8
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 6.1e-74 282.0 249 58.2
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 1.0e-73 281.2 217 64.1
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 4.0e-73 279.3 246 60.6
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 4.4e-72 275.8 274 52.6
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.8e-71 273.1 253 54.9
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.9e-69 265.4 297 49.2
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 1.3e-68 264.2 316 48.4
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 8.0e-66 255.0 248 52.4
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.0e-65 254.6 300 46.7
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 1.2e-64 251.1 263 47.5
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 9.2e-62 241.5 241 50.6
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 4.9e-55 219.2 285 43.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.7e-53 213.4 165 63.0
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.0e-53 212.2 167 64.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 1.3e-52 211.1 210 53.3
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 4.7e-50 202.6 150 68.7
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.0e-44 184.9 281 42.7
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.3e-44 184.5 226 46.0
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.3e-43 178.7 134 63.4
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 1.8e-41 174.1 144 59.7
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.0e-41 172.9 193 51.8
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 5.2e-41 172.6 254 41.3
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.5e-40 171.0 244 39.8
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 2.6e-40 170.2 256 40.6
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 6.4e-39 165.6 135 58.5
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 4.1e-38 162.9 161 52.8
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.2e-37 161.4 132 58.3
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.7e-36 157.5 131 60.3
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 6.8e-33 145.6 112 55.4
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 5.8e-32 142.5 146 54.1
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-31 141.4 105 65.7
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 4.2e-30 136.3 136 51.5
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 3.4e-24 116.7 106 56.6
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.2e-21 108.2 204 35.8
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.8e-15 86.7 73 64.4
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 6.0e-13 79.3 73 54.8
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 1.9e-11 74.3 73 46.6


User provided reference genes

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