Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 8.3e-134 480.3 234 100.0
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.1e-130 469.9 234 97.9
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 9.3e-85 317.4 232 72.0
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.1e-84 316.2 237 71.3
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 1.5e-82 310.1 238 71.0
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 5.6e-82 308.1 238 71.0
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 2.1e-81 306.2 236 70.8
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 4.8e-81 305.1 234 68.8
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 5.3e-80 301.6 234 67.9
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 5.3e-80 301.6 234 67.9
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.2e-79 300.4 236 69.9
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.0e-79 299.7 234 67.9
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 3.4e-79 298.9 235 70.6
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 3.4e-79 298.9 238 69.7
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.2e-78 296.2 235 69.8
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 4.9e-78 295.0 239 69.5
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 3.2e-77 292.4 237 67.9
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 9.3e-77 290.8 238 68.1
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 1.3e-75 287.0 234 67.9
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.5e-74 282.7 238 63.4
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 2.1e-73 279.6 254 64.2
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 3.6e-73 278.9 235 65.5
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 6.2e-73 278.1 241 63.1
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 4.0e-72 275.4 236 63.1
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 6.9e-72 274.6 235 64.7
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 9.0e-72 274.2 233 65.7
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.2e-71 273.9 235 63.8
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 1.5e-71 273.5 227 66.1
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 1.5e-71 273.5 234 65.4
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.0e-71 273.1 236 63.6
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 2.0e-71 273.1 233 64.4
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.6e-71 272.7 243 61.3
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 7.6e-71 271.2 240 61.7
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 7.6e-71 271.2 232 64.7
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.7e-70 270.0 235 62.1
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 4.9e-70 268.5 235 62.6
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 6.4e-70 268.1 232 64.2
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 8.4e-70 267.7 232 63.4
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 8.4e-70 267.7 237 64.6
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.1e-69 267.3 175 76.0
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.1e-69 267.3 235 63.4
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 1.9e-69 266.5 235 62.6
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 2.4e-69 266.2 176 76.1
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.4e-69 266.2 176 77.3
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 3.2e-69 265.8 237 64.1
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 4.2e-69 265.4 216 67.6
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 7.1e-69 264.6 170 77.1
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 9.3e-69 264.2 234 64.1
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.2e-68 263.8 176 76.7
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.7e-68 262.7 241 59.3
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 4.6e-68 261.9 240 62.1
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.0e-67 260.8 170 77.6
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.8e-67 260.0 229 63.3
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.8e-67 260.0 229 63.3
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 3.9e-67 258.8 195 69.2
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 8.7e-67 257.7 170 75.9
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 8.7e-67 257.7 228 62.7
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.5e-66 256.9 226 61.5
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.3e-65 253.8 237 60.8
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.6e-65 253.4 199 68.8
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.6e-65 253.4 210 69.5
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 2.8e-65 252.7 235 60.4
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 3.7e-65 252.3 236 60.6
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 3.7e-65 252.3 238 61.3
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 3.7e-65 252.3 238 61.3
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 3.7e-65 252.3 238 61.3
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 6.2e-65 251.5 238 60.9
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 8.1e-65 251.1 235 60.0
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 1.4e-64 250.4 237 61.6
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 2.4e-64 249.6 207 66.2
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 3.1e-64 249.2 236 61.4
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 9.0e-64 247.7 222 64.0
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 1.2e-63 247.3 126 93.7
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 2.0e-63 246.5 164 76.2
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.8e-63 245.0 234 59.8
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 1.0e-62 244.2 234 58.5
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 8.4e-62 241.1 235 59.1
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 8.4e-62 241.1 235 59.1
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 5.5e-61 238.4 131 84.7
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 9.3e-61 237.7 129 86.8
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.1e-60 236.5 234 58.5
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.5e-58 230.3 165 70.9
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.5e-58 230.3 165 70.9
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.3e-57 227.3 128 83.6
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.6e-57 226.9 147 78.9
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.4e-56 223.0 157 68.2
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 2.9e-54 216.1 221 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 1.1e-53 214.2 187 59.9
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 3.2e-53 212.6 179 64.8
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.7e-52 209.5 125 80.0
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 4.6e-52 208.8 157 66.2
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 6.7e-51 204.9 144 71.5
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 9.7e-50 201.1 169 66.3
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 2.8e-49 199.5 192 55.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 3.4e-47 192.6 141 71.6
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.3e-46 190.7 235 51.1
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.4e-43 180.6 168 59.5
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.2e-39 167.5 235 47.7
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.6e-36 157.1 130 63.8
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 1.6e-36 157.1 139 55.4
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 2.1e-36 156.8 187 50.8
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 9.7e-26 121.3 167 46.1
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.0e-23 113.6 56 94.6
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 5.0e-22 109.0 84 69.0
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.2e-20 104.4 58 82.8
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 3.7e-17 92.8 65 70.8
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 6.3e-17 92.0 147 36.7
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 2.9e-14 83.2 140 31.4
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.5e-10 70.9 45 80.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 9.8e-10 68.2 101 36.6
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.3e-09 67.8 45 77.8


User provided reference genes

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