Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0125900 Salix brachista HOM05D005637 ORTHO05D006983 1.3e-106 389.8 215 100.0
Potri.008G089900 Populus trichocarpa HOM05D005637 ORTHO05D006983 9.5e-44 181.0 175 70.3
MELO3C002951.2 Cucumis melo HOM05D005637 ORTHO05D006983 2.0e-41 173.3 176 67.6
CsaV3_5G025290 Cucumis sativus L. HOM05D005637 ORTHO05D006983 2.6e-41 172.9 176 58.5
Sabra08G0067300 Salix brachista HOM05D005637 ORTHO05D006983 2.6e-41 172.9 175 68.6
ClCG09G021890 Citrullus lanatus HOM05D005637 ORTHO05D006983 7.5e-41 171.4 176 65.3
MBI02_g20483_MAGBIO Magnolia biondii HOM05D005637 ORTHO05D006983 1.7e-40 170.2 158 57.6
Nn2g15887 Nelumbo nucifera HOM05D005637 ORTHO05D006983 1.7e-40 170.2 175 65.1
Dinv10648 Davidia involucrata HOM05D005637 ORTHO05D006983 2.9e-40 169.5 175 57.1
Cpa.g.sc57.35 Carica papaya HOM05D005637 ORTHO05D006983 1.4e-39 167.2 175 56.6
TAR496G0002 Trochodendron aralioides HOM05D005637 ORTHO05D006983 1.9e-39 166.8 175 56.0
TAR629G0341 Trochodendron aralioides HOM05D005637 ORTHO05D006983 1.9e-39 166.8 175 56.0
CSS0030079 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 3.2e-39 166.0 175 54.9
Haze_07302 Corylus avellana HOM05D005637 ORTHO05D006983 3.2e-39 166.0 175 54.9
TWI75G0754 Tripterygium wilfordii HOM05D005637 ORTHO05D006983 7.1e-39 164.9 175 53.7
ATR0564G491 Amborella trichopoda HOM05D005637 ORTHO05D006983 1.2e-38 164.1 175 53.7
Manes.14G080801 Manihot esculenta HOM05D005637 ORTHO05D006983 1.2e-38 164.1 177 54.2
QL10p017509 Quercus lobata HOM05D005637 ORTHO05D006983 1.2e-38 164.1 175 56.0
Os09g0411700 Oryza sativa ssp. japonica HOM05D005637 ORTHO05D006983 2.1e-38 163.3 182 57.7
Actinidia04874 Actinidia chinensis HOM05D005637 ORTHO05D006983 1.3e-37 160.6 175 55.4
GSVIVG01007979001 Vitis vinifera HOM05D005637 ORTHO05D006983 1.3e-37 160.6 175 58.3
arahy.Tifrunner.gnm1.ann1.M53U4W Arachis hypogaea HOM05D005637 ORTHO05D006983 2.3e-37 159.8 175 62.9
Cc00_g08390 Coffea canephora HOM05D005637 ORTHO05D006983 2.3e-37 159.8 175 56.6
A09p39930 Brassica napus HOM05D005637 ORTHO05D006983 3.0e-37 159.5 140 59.3
C05p24490 Brassica napus HOM05D005637 ORTHO05D006983 3.0e-37 159.5 140 59.3
BolC5t31183H Brassica oleracea HOM05D005637 ORTHO05D006983 3.0e-37 159.5 140 59.3
BraA09t39492Z Brassica rapa HOM05D005637 ORTHO05D006983 3.0e-37 159.5 140 59.3
Prupe.1G278400 Prunus persica HOM05D005637 ORTHO05D006983 5.1e-37 158.7 140 59.3
AL1G39180 Arabidopsis lyrata HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
AT1G26550 Arabidopsis thaliana HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
arahy.Tifrunner.gnm1.ann1.KT0WW2 Arachis hypogaea HOM05D005637 ORTHO05D006983 6.6e-37 158.3 175 62.3
BcaB03g11995 Brassica carinata HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
A08p27370 Brassica napus HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
BraA08t34678Z Brassica rapa HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
Thhalv10009046m.g Eutrema salsugineum HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
Sp1g22230 Schrenkiella parvula HOM05D005637 ORTHO05D006983 6.6e-37 158.3 140 58.6
Zm00001eb312430 Zea mays HOM05D005637 ORTHO05D006983 6.6e-37 158.3 185 60.0
CARHR025420 Cardamine hirsuta HOM05D005637 ORTHO05D006983 8.6e-37 157.9 140 57.9
Psat5g200400 Pisum sativum HOM05D005637 ORTHO05D006983 8.6e-37 157.9 139 59.0
Ciclev10022740m.g Citrus clementina HOM05D005637 ORTHO05D006983 1.5e-36 157.1 175 52.6
ECA247G3019 Erigeron canadensis HOM05D005637 ORTHO05D006983 1.5e-36 157.1 140 58.6
Carub.0001s2449 Capsella rubella HOM05D005637 ORTHO05D006983 1.9e-36 156.8 140 57.9
CiPaw.11G046600 Carya illinoinensis HOM05D005637 ORTHO05D006983 2.5e-36 156.4 139 58.3
TPR.G11903 Trifolium pratense HOM05D005637 ORTHO05D006983 2.5e-36 156.4 140 57.9
vmacro17563 Vaccinium macrocarpon HOM05D005637 ORTHO05D006983 2.5e-36 156.4 175 54.3
CANSAT80G1152 Cannabis sativa HOM05D005637 ORTHO05D006983 3.3e-36 156.0 175 56.6
CAN.G648.12 Capsicum annuum HOM05D005637 ORTHO05D006983 3.3e-36 156.0 182 53.3
Hma1.2p1_0060F.1_g033550 Hydrangea macrophylla HOM05D005637 ORTHO05D006983 3.3e-36 156.0 175 49.7
VMungo1309G0753 Vigna mungo HOM05D005637 ORTHO05D006983 3.3e-36 156.0 175 62.3
Ca_14657_v3 Cicer arietinum L. HOM05D005637 ORTHO05D006983 4.3e-36 155.6 175 61.1
Lalb_Chr08g0235561 Lupinus albus HOM05D005637 ORTHO05D006983 4.3e-36 155.6 175 58.9
Phvul.009G185800 Phaseolus vulgaris HOM05D005637 ORTHO05D006983 4.3e-36 155.6 175 62.3
DCAR_026064 Daucus carota HOM05D005637 ORTHO05D006983 5.6e-36 155.2 139 57.6
Medtr3g037570 Medicago truncatula HOM05D005637 ORTHO05D006983 5.6e-36 155.2 175 56.6
Oeu052447.1 Olea europaea HOM05D005637 ORTHO05D006983 7.3e-36 154.8 175 60.6
Glyma.04G166700 Glycine max HOM05D005637 ORTHO05D006983 9.5e-36 154.5 175 61.7
MD00G1081600 Malus domestica HOM05D005637 ORTHO05D006983 9.5e-36 154.5 140 58.6
HPP92_011002 Vanilla planifolia HOM05D005637 ORTHO05D006983 9.5e-36 154.5 176 57.4
LjContig00102g0010410 Lotus japonicus HOM05D005637 ORTHO05D006983 1.2e-35 154.1 175 62.9
Glyma.06G195800 Glycine max HOM05D005637 ORTHO05D006983 1.6e-35 153.7 175 61.1
PGSC0003DMG400021937 Solanum tuberosum HOM05D005637 ORTHO05D006983 1.6e-35 153.7 175 56.6
PSO832G2445 Papaver somniferum HOM05D005637 ORTHO05D006983 2.1e-35 153.3 140 57.1
PGR119G0762 Punica granatum HOM05D005637 ORTHO05D006983 3.6e-35 152.5 175 53.7
Rhsim08G0152700 Rhododendron simsii HOM05D005637 ORTHO05D006983 3.6e-35 152.5 175 60.6
Ah.02g113670 Amaranthus hybridus HOM05D005637 ORTHO05D006983 4.7e-35 152.1 178 51.1
Aqoxy3G03463 Aquilegia oxysepala HOM05D005637 ORTHO05D006983 4.7e-35 152.1 139 56.8
Migut.I00202 Erythranthe guttata HOM05D005637 ORTHO05D006983 4.7e-35 152.1 175 49.1
FvH4_4g30970 Fragaria vesca HOM05D005637 ORTHO05D006983 8.1e-35 151.4 137 59.1
FAN17G1506 Fragaria x ananassa HOM05D005637 ORTHO05D006983 8.1e-35 151.4 137 59.1
FAN22G0476 Fragaria x ananassa HOM05D005637 ORTHO05D006983 8.1e-35 151.4 137 59.1
RcHm_v2.0_Chr4g0439331 Rosa chinensis HOM05D005637 ORTHO05D006983 8.1e-35 151.4 139 58.3
SGA_v2.0_scaffold313G48341 Striga asiatica HOM05D005637 ORTHO05D006983 1.4e-34 150.6 175 59.4
CDE02G3019 Ceratophyllum demersum HOM05D005637 ORTHO05D006983 1.8e-34 150.2 76 89.5
LjContig00103g0026967 Lotus japonicus HOM05D005637 ORTHO05D006983 1.8e-34 150.2 76 89.5
Eucgr.G02481 Eucalyptus grandis HOM05D005637 ORTHO05D006983 2.3e-34 149.8 136 58.8
unitig_748.g7812 Utricularia gibba HOM05D005637 ORTHO05D006983 2.3e-34 149.8 175 60.0
Gohir.A07G064200 Gossypium hirsutum HOM05D005637 ORTHO05D006983 3.1e-34 149.4 76 89.5
Gohir.D07G069000 Gossypium hirsutum HOM05D005637 ORTHO05D006983 3.1e-34 149.4 76 89.5
Gorai.001G072500 Gossypium raimondii HOM05D005637 ORTHO05D006983 3.1e-34 149.4 76 89.5
THA.LOC104822041 Tarenaya hassleriana HOM05D005637 ORTHO05D006983 3.1e-34 149.4 76 88.2
FAN07G0507 Fragaria x ananassa HOM05D005637 ORTHO05D006983 4.0e-34 149.1 137 58.4
Sopen12g016310 Solanum pennellii HOM05D005637 ORTHO05D006983 4.0e-34 149.1 175 56.6
Thecc.03G093000 Theobroma cacao HOM05D005637 ORTHO05D006983 4.0e-34 149.1 76 88.2
Duzib068G0698 Durio zibethinus HOM05D005637 ORTHO05D006983 5.2e-34 148.7 76 88.2
Duzib205G1800 Durio zibethinus HOM05D005637 ORTHO05D006983 5.2e-34 148.7 76 88.2
FAN12G2219 Fragaria x ananassa HOM05D005637 ORTHO05D006983 6.8e-34 148.3 137 58.4
AagrBONN_evm.TU.Sc2ySwM_228.632 Anthoceros agrestis HOM05D005637 ORTHO05D006983 8.9e-34 147.9 175 60.0
AagrBONN_evm.TU.Sc2ySwM_362.586 Anthoceros agrestis HOM05D005637 ORTHO05D006983 8.9e-34 147.9 175 60.0
HanXRQChr04g0107301 Helianthus annuus HOM05D005637 ORTHO05D006983 1.5e-33 147.1 76 86.8
MBI04_g11434_MAGBIO Magnolia biondii HOM05D005637 ORTHO05D006983 1.5e-33 147.1 139 55.4
Peaxi162Scf00106g00427 Petunia axillaris HOM05D005637 ORTHO05D006983 1.5e-33 147.1 147 55.8
Atru.chr9.197 Acer truncatum HOM05D005637 ORTHO05D006983 2.0e-33 146.7 86 77.9
SMO367G1093 Selaginella moellendorffii HOM05D005637 ORTHO05D006983 2.6e-33 146.4 175 54.9
COL.COLO4_36923 Corchorus olitorius HOM05D005637 ORTHO05D006983 3.4e-33 146.0 76 85.5
Solyc12g036200.2 Solanum lycopersicum HOM05D005637 ORTHO05D006983 4.4e-33 145.6 135 56.3
CANSAT80G0999 Cannabis sativa HOM05D005637 ORTHO05D006983 5.8e-33 145.2 178 53.9
Mapoly0082s0039 Marchantia polymorpha HOM05D005637 ORTHO05D006983 7.6e-33 144.8 175 53.7
Nitab4.5_0001195g0050 Nicotiana tabacum HOM05D005637 ORTHO05D006983 9.9e-33 144.4 135 55.6
Nitab4.5_0001997g0100 Nicotiana tabacum HOM05D005637 ORTHO05D006983 9.9e-33 144.4 135 55.6
Sc04g0002850 Simmondsia chinensis HOM05D005637 ORTHO05D006983 1.7e-32 143.7 177 48.6
CSS0002747 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 2.9e-32 142.9 136 56.6
EL10Ac5g11048 Beta vulgaris HOM05D005637 ORTHO05D006983 1.1e-31 141.0 76 81.6
Ah.02g113660 Amaranthus hybridus HOM05D005637 ORTHO05D006983 1.2e-30 137.5 174 46.0
Pp3c26_7640 Physcomitrium patens HOM05D005637 ORTHO05D006983 2.1e-30 136.7 76 80.3
CBR_g30502 Chara braunii HOM05D005637 ORTHO05D006983 6.0e-30 135.2 76 80.3
AUR62008440 Chenopodium quinoa HOM05D005637 ORTHO05D006983 1.7e-29 133.7 76 78.9
Lsat_1_v5_gn_1_14240 Lactuca sativa HOM05D005637 ORTHO05D006983 1.5e-28 130.6 121 57.0
CSS0006784 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 1.6e-27 127.1 66 87.9
CSS0019959 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 1.6e-27 127.1 84 73.8
AUR62021650 Chenopodium quinoa HOM05D005637 ORTHO05D006983 1.6e-27 127.1 69 81.2
TAR365G0307 Trochodendron aralioides HOM05D005637 ORTHO05D006983 7.6e-25 118.2 58 89.7
LjContig00261g0007071 Lotus japonicus HOM05D005637 ORTHO05D006983 2.4e-23 113.2 76 69.7
CSS0007590 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 7.3e-20 101.7 54 85.2
Sed0018902 Sechium edule HOM05D005637 ORTHO05D006983 6.2e-19 98.6 59 76.3
BcaC01g01741 Brassica carinata HOM05D005637 ORTHO05D006983 1.1e-18 97.8 48 89.6
Hund02632 Selenicereus undatus HOM05D005637 ORTHO05D006983 1.1e-18 97.8 57 75.4
C03p72380 Brassica napus HOM05D005637 ORTHO05D006983 4.0e-18 95.9 48 87.5
BolC3t19533H Brassica oleracea HOM05D005637 ORTHO05D006983 4.0e-18 95.9 48 87.5
CSS0040245 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 1.7e-16 90.5 48 85.4
SalBow5G0960 Salvia bowleyana HOM05D005637 ORTHO05D006983 3.8e-16 89.4 139 41.0
BcaC06g35140 Brassica carinata HOM05D005637 ORTHO05D006983 8.4e-16 88.2 139 42.4
BolC7t42459H Brassica oleracea HOM05D005637 ORTHO05D006983 2.3e-13 80.1 47 78.7
C07p19400 Brassica napus HOM05D005637 ORTHO05D006983 3.0e-13 79.7 47 78.7
Manes.06G090201 Manihot esculenta HOM05D005637 ORTHO05D006983 1.3e-11 74.3 126 56.3
arahy.Tifrunner.gnm1.ann1.DXDM30 Arachis hypogaea HOM05D005637 ORTHO05D006983 2.4e-10 70.1 126 38.1
Aa31LG7G8540 Aethionema arabicum HOM05D005637 ORTHO05D006983 9.0e-10 68.2 91 44.0
BcaC03g15376 Brassica carinata HOM05D005637 ORTHO05D006983 4.5e-09 65.9 137 35.8
arahy.Tifrunner.gnm1.ann1.38D1EG Arachis hypogaea HOM05D005637 ORTHO05D006983 2.4e-07 60.1 87 41.4
BcaB03g12359 Brassica carinata HOM05D005637 ORTHO05D006983 4.2e-07 59.3 88 40.9
BcaB04g17310 Brassica carinata HOM05D005637 ORTHO05D006983 4.2e-07 59.3 88 40.9
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 1.2e-06 57.8 47 53.2
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 1.6e-06 57.4 63 46.0
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 3.5e-06 56.2 47 53.2
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 4.6e-06 55.8 80 37.5
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 6.0e-06 55.5 52 53.8


User provided reference genes

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