Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 6.5e-196 687.2 343 100.0
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 4.4e-176 621.3 343 91.5
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 1.0e-140 503.8 335 75.5
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 4.3e-139 498.4 334 75.7
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 4.7e-138 495.0 340 74.1
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 8.1e-138 494.2 343 74.3
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.2e-136 490.3 335 76.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.2e-136 490.3 339 74.0
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 3.4e-136 488.8 340 73.5
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.3e-135 486.9 340 73.2
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 4.9e-135 485.0 342 72.2
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 1.4e-134 483.4 345 72.2
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 3.2e-134 482.3 338 73.7
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 4.2e-134 481.9 340 72.6
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 1.6e-133 479.9 340 72.4
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 6.6e-132 474.6 340 71.5
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 5.6e-131 471.5 335 72.5
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 9.6e-131 470.7 340 71.5
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 8.1e-130 467.6 341 69.5
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 1.8e-129 466.5 339 70.8
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.3e-129 464.9 351 69.2
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 4.5e-128 461.8 336 69.9
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 7.6e-128 461.1 335 70.7
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 4.9e-127 458.4 344 68.6
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 4.9e-127 458.4 343 71.1
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 2.4e-126 456.1 335 70.1
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 5.1e-124 448.4 341 66.9
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 6.7e-124 448.0 336 66.7
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.1e-123 447.2 346 69.7
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.9e-123 446.4 340 68.8
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 5.6e-123 444.9 337 68.0
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 1.6e-122 443.4 335 66.9
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.8e-122 441.8 349 66.2
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 4.8e-122 441.8 335 68.4
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 6.2e-122 441.4 340 65.9
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 1.8e-121 439.9 338 65.7
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 2.4e-121 439.5 333 66.4
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 4.0e-121 438.7 335 68.1
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 4.0e-121 438.7 335 66.6
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 5.3e-121 438.3 338 66.6
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 1.2e-120 437.2 339 69.6
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.2e-120 437.2 336 69.0
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 2.0e-120 436.4 341 64.8
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 2.0e-120 436.4 341 65.4
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 3.4e-120 435.6 338 68.3
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 3.4e-120 435.6 338 68.3
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 4.5e-120 435.3 340 66.5
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 5.8e-120 434.9 297 75.4
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 5.8e-120 434.9 337 68.2
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.3e-119 433.7 338 67.8
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.7e-119 433.3 337 69.1
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 3.8e-119 432.2 331 67.7
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 4.9e-119 431.8 336 68.8
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 8.4e-119 431.0 336 69.0
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.4e-118 430.3 338 65.1
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.9e-118 429.9 335 66.6
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 3.2e-118 429.1 336 68.5
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 3.2e-118 429.1 341 65.4
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 5.5e-118 428.3 329 67.2
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.6e-117 426.8 339 67.8
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.6e-117 426.8 339 67.8
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 4.6e-117 425.2 323 67.8
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 4.6e-117 425.2 300 71.7
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 4.6e-117 425.2 343 67.6
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.8e-116 423.3 288 78.1
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.8e-116 423.3 275 77.1
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 2.3e-116 422.9 338 68.6
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 6.7e-116 421.4 338 68.3
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 6.7e-116 421.4 338 66.9
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 8.7e-116 421.0 284 74.6
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.9e-115 419.9 338 68.0
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 7.4e-115 417.9 380 60.8
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.3e-114 417.2 335 64.8
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 3.7e-114 415.6 362 61.0
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 1.2e-112 410.6 297 70.4
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.6e-112 409.5 369 59.1
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 2.6e-112 409.5 381 58.5
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 2.2e-111 406.4 317 65.0
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 1.1e-110 404.1 273 73.6
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.4e-110 403.7 343 62.4
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.1e-109 399.8 364 58.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.0e-108 397.5 316 65.2
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 3.3e-107 392.5 339 60.8
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 5.3e-105 385.2 272 70.6
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 5.9e-104 381.7 288 67.4
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.0e-103 380.9 275 72.7
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.7e-103 380.2 338 59.2
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.6e-101 373.6 287 65.5
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 3.6e-101 372.5 275 70.9
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 6.1e-101 371.7 294 66.3
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.0e-100 370.9 289 65.4
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.2e-96 357.5 283 65.4
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 7.2e-94 348.2 272 65.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 1.0e-92 344.4 341 54.8
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 7.4e-91 338.2 291 66.3
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 1.4e-89 334.0 256 65.2
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 7.7e-88 328.2 275 63.6
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.3e-82 310.8 251 61.0
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 7.0e-81 305.1 278 57.6
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 4.2e-78 295.8 262 60.3
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 5.2e-76 288.9 261 53.6
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 5.2e-76 288.9 222 72.1
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 4.1e-73 279.3 279 55.2
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 4.1e-65 252.7 158 79.7
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.0e-63 248.1 252 49.2
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.7e-63 247.3 222 64.0
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 4.2e-62 242.7 212 55.7
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.8e-61 240.0 224 60.7
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 8.0e-61 238.4 224 60.3
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 4.9e-58 229.2 160 78.1
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.5e-51 205.3 235 49.4
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 2.5e-46 190.3 184 58.2
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.4e-43 179.5 202 56.4
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.9e-42 176.8 280 39.6
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 2.1e-40 170.6 257 37.0
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 6.2e-21 105.9 88 58.0
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.0e-15 88.6 65 66.2
MD13G1066100 Malus domestica HOM05D002318 ORTHO05D008744 1.2e-11 75.1 77 50.6
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 4.9e-10 69.7 37 75.7
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 8.4e-10 68.9 56 66.1


User provided reference genes

Program Settings