Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 5.5e-231 803.9 393 100.0
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.4e-186 655.6 345 91.6
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.7e-152 543.1 346 76.0
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.7e-147 526.6 346 74.0
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 2.9e-147 525.8 343 74.9
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 3.5e-145 518.8 340 73.2
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 2.8e-142 509.2 342 73.7
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 6.2e-142 508.1 342 73.1
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 3.4e-140 502.3 341 69.8
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 3.8e-139 498.8 342 71.6
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.4e-138 496.9 341 70.4
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.8e-136 490.0 344 69.5
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 1.5e-135 486.9 342 69.3
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 2.5e-135 486.1 341 71.0
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 3.3e-135 485.7 341 70.7
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.3e-134 483.8 341 69.8
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 4.8e-134 481.9 352 68.8
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.1e-133 480.7 353 68.3
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.1e-133 480.7 341 68.6
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.8e-133 479.9 342 69.0
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 3.4e-132 475.7 344 68.9
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 5.8e-132 474.9 344 68.9
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.7e-131 473.4 348 67.5
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 2.9e-131 472.6 341 69.2
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 4.9e-131 471.9 342 68.1
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 6.4e-131 471.5 341 70.1
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.1e-130 470.7 343 68.5
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 5.5e-130 468.4 342 69.9
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 2.7e-129 466.1 348 66.1
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 3.5e-129 465.7 342 66.7
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 7.9e-129 464.5 342 69.0
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 1.5e-127 460.3 343 67.3
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 7.4e-127 458.0 341 67.4
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 9.6e-127 457.6 340 68.2
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 2.8e-126 456.1 342 68.4
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 2.8e-126 456.1 341 64.5
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.8e-126 456.1 334 66.8
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 4.8e-126 455.3 342 67.8
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.8e-125 453.4 343 65.9
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 4.0e-125 452.2 341 65.7
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 5.3e-125 451.8 346 68.2
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.5e-124 450.3 342 65.8
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 2.6e-124 449.5 347 66.9
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.7e-123 446.8 342 64.9
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 4.9e-123 445.3 341 63.6
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 7.1e-122 441.4 306 69.9
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.2e-121 440.7 343 64.7
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.5e-121 439.1 342 64.6
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 6.0e-121 438.3 342 62.0
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 4.3e-119 432.2 341 62.8
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 5.7e-119 431.8 335 63.9
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 4.8e-118 428.7 308 69.2
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 3.4e-116 422.5 334 63.5
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 4.5e-116 422.2 306 68.6
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 7.6e-116 421.4 354 60.7
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 2.9e-115 419.5 342 62.9
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.6e-113 413.7 334 62.6
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 7.9e-113 411.4 296 68.2
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 5.1e-112 408.7 351 58.4
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.6e-110 403.7 336 62.5
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.2e-108 397.5 347 58.2
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 4.5e-108 395.6 349 58.7
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.3e-107 394.0 371 58.5
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 8.5e-107 391.3 360 55.3
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.4e-106 390.6 293 64.8
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.7e-105 386.3 341 59.2
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 4.6e-105 385.6 339 60.2
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 2.6e-103 379.8 344 58.4
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 4.4e-103 379.0 291 64.9
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 9.7e-95 351.3 266 65.0
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 1.4e-93 347.4 287 60.3
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 3.3e-87 326.2 370 51.9
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.2e-83 313.5 342 51.5
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 5.2e-80 302.4 205 70.2
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 3.7e-78 296.2 371 45.3
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 3.2e-74 283.1 346 49.1
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 3.6e-73 279.6 224 59.8
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 1.8e-72 277.3 387 39.8
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.0e-71 273.9 279 50.5
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.4e-69 266.9 407 41.8
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 3.1e-69 266.5 315 46.0
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 4.0e-64 249.6 241 55.2
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 2.9e-62 243.4 271 51.7
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 5.6e-58 229.2 151 70.2
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 1.1e-53 214.9 349 39.0
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 1.3e-51 208.0 222 50.0
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 9.9e-47 191.8 187 54.0
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.8e-41 173.7 116 70.7
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 5.2e-40 169.5 131 64.9
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.2e-36 158.3 130 69.2
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 5.2e-32 142.9 123 56.1
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.9e-20 102.4 72 73.6
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.0e-19 100.5 136 42.6
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.0e-19 100.5 136 42.6
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 9.6e-18 95.5 51 90.2
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.6e-17 94.7 52 82.7
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.8e-16 91.3 64 65.6
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 3.4e-15 87.0 63 73.0
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 4.9e-14 83.2 89 50.6
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 9.3e-13 79.0 61 67.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.0e-11 75.5 53 67.9
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.8e-11 74.7 49 73.5
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 2.6e-07 60.8 61 52.5


User provided reference genes

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