Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 4.8e-38 160.6 78 100.0
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.1e-26 122.9 103 64.1
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 1.8e-24 115.5 103 58.3
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.8e-24 115.5 103 61.2
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 4.4e-23 110.9 103 57.3
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 9.8e-23 109.8 103 57.3
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 2.2e-22 108.6 103 57.3
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 3.7e-22 107.8 103 55.3
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 4.9e-22 107.5 103 57.3
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 1.8e-21 105.5 103 56.3
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 3.1e-21 104.8 103 55.3
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 3.1e-21 104.8 103 55.3
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 4.1e-21 104.4 103 55.3
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 4.1e-21 104.4 103 56.3
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 5.4e-21 104.0 103 55.3
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 5.4e-21 104.0 103 55.3
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 5.4e-21 104.0 103 54.4
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 7.0e-21 103.6 103 56.3
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 7.0e-21 103.6 103 56.3
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 9.1e-21 103.2 103 54.4
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 9.1e-21 103.2 103 54.4
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.2e-20 102.8 103 53.4
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.2e-20 102.8 103 54.4
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.7e-20 101.7 103 53.4
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 2.7e-20 101.7 103 53.4
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 2.7e-20 101.7 103 54.4
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 3.5e-20 101.3 103 52.4
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 5.9e-20 100.5 103 53.4
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 7.7e-20 100.1 103 55.3
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 7.7e-20 100.1 103 54.4
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 1.3e-19 99.4 103 52.4
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 2.3e-19 98.6 103 50.5
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 3.8e-19 97.8 103 53.4
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 3.8e-19 97.8 103 52.4
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 6.6e-19 97.1 103 51.5
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 8.6e-19 96.7 103 51.5
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.1e-18 96.3 103 54.4
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 1.5e-18 95.9 103 51.5
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 1.9e-18 95.5 103 49.5
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.9e-18 95.5 103 51.5
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 1.9e-18 95.5 103 51.5
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.9e-18 95.5 103 53.4
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 2.5e-18 95.1 103 48.5
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 3.3e-18 94.7 103 52.4
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 3.3e-18 94.7 103 51.5
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 4.2e-18 94.4 103 49.5
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 5.5e-18 94.0 103 51.5
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 5.5e-18 94.0 103 51.5
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 7.2e-18 93.6 103 50.5
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 7.2e-18 93.6 98 54.1
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 9.5e-18 93.2 103 50.5
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 9.5e-18 93.2 103 50.5
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 9.5e-18 93.2 103 48.5
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.2e-17 92.8 52 80.8
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 1.2e-17 92.8 103 48.5
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 1.6e-17 92.4 103 49.5
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 1.6e-17 92.4 103 48.5
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.6e-17 92.4 103 50.5
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 2.1e-17 92.0 103 48.5
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.1e-17 92.0 103 49.5
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.8e-17 91.7 103 48.5
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 2.8e-17 91.7 103 50.5
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 2.8e-17 91.7 103 52.4
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 3.6e-17 91.3 121 43.0
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 4.7e-17 90.9 103 49.5
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 4.7e-17 90.9 98 52.0
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 6.1e-17 90.5 103 48.5
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 6.1e-17 90.5 103 48.5
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 6.1e-17 90.5 103 47.6
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 6.1e-17 90.5 102 49.0
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 1.0e-16 89.7 77 59.7
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.0e-16 89.7 103 51.5
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.0e-16 89.7 103 47.6
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.4e-16 89.4 103 49.5
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.3e-16 88.6 122 40.2
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.3e-16 88.6 122 40.2
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 2.3e-16 88.6 103 47.6
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 4.0e-16 87.8 122 41.0
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.5e-15 85.9 103 49.5
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 2.0e-15 85.5 103 45.6
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 3.4e-15 84.7 98 48.0
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 5.7e-15 84.0 103 46.6
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 9.8e-15 83.2 103 44.7
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.7e-14 82.4 103 45.6
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 8.3e-14 80.1 92 48.9
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.1e-13 77.8 103 41.7
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 5.4e-13 77.4 103 40.8
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 5.4e-13 77.4 103 42.7
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 8.6e-11 70.1 50 64.0
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.9e-10 68.9 102 37.3
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 3.6e-09 64.7 101 34.7
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 8.0e-09 63.5 102 36.3
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.0e-08 63.2 75 44.0
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.1e-08 61.6 53 50.9
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.0e-07 58.9 75 40.0
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 4.9e-06 54.3 75 38.7
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 6.4e-06 53.9 77 39.0


User provided reference genes

Program Settings