Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0102000 Salix brachista HOM05D001046 ORTHO05D005883 2.9e-34 147.9 71 100.0
Potri.008G109300 Populus trichocarpa HOM05D001046 ORTHO05D005883 5.2e-23 110.5 74 79.7
Potri.T108626 Populus trichocarpa HOM05D001046 ORTHO05D005883 5.2e-23 110.5 74 79.7
Dinv27415 Davidia involucrata HOM05D001046 ORTHO05D005883 4.4e-22 107.5 73 76.7
TAR629G1491 Trochodendron aralioides HOM05D001046 ORTHO05D005883 9.8e-22 106.3 73 78.1
GSVIVG01012023001 Vitis vinifera HOM05D001046 ORTHO05D005883 9.8e-22 106.3 73 75.3
CSS0000214 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D005883 1.3e-21 105.9 73 75.3
Actinidia30169 Actinidia chinensis HOM05D001046 ORTHO05D005883 2.9e-21 104.8 73 74.0
Rhsim08G0040600 Rhododendron simsii HOM05D001046 ORTHO05D005883 2.9e-21 104.8 73 75.3
Prupe.1G300500 Prunus persica HOM05D001046 ORTHO05D005883 1.1e-20 102.8 73 72.6
Nn3g17629 Nelumbo nucifera HOM05D001046 ORTHO05D005883 1.4e-20 102.4 73 74.0
TWI79G0779 Tripterygium wilfordii HOM05D001046 ORTHO05D005883 1.9e-20 102.1 73 71.2
Manes.06G076400 Manihot esculenta HOM05D001046 ORTHO05D005883 2.4e-20 101.7 73 74.0
Ah.03g138130 Amaranthus hybridus HOM05D001046 ORTHO05D005883 3.2e-20 101.3 73 71.2
RcHm_v2.0_Chr4g0436541 Rosa chinensis HOM05D001046 ORTHO05D005883 3.2e-20 101.3 73 71.2
Cfa008799 Carpinus fangiana HOM05D001046 ORTHO05D005883 5.4e-20 100.5 73 71.2
Atru.chr11.1438 Acer truncatum HOM05D001046 ORTHO05D005883 7.0e-20 100.1 73 71.2
Atru.chr11.1468 Acer truncatum HOM05D001046 ORTHO05D005883 7.0e-20 100.1 73 71.2
CARHR025740 Cardamine hirsuta HOM05D001046 ORTHO05D005883 9.2e-20 99.8 74 70.3
vmacro18368 Vaccinium macrocarpon HOM05D001046 ORTHO05D005883 9.2e-20 99.8 73 72.6
Thecc.02G315500 Theobroma cacao HOM05D001046 ORTHO05D005883 1.2e-19 99.4 73 69.9
Gohir.A12G157800 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.6e-19 99.0 73 68.5
Hma1.2p1_0189F.1_g082730 Hydrangea macrophylla HOM05D001046 ORTHO05D005883 1.6e-19 99.0 73 69.9
CiPaw.05G117600 Carya illinoinensis HOM05D001046 ORTHO05D005883 2.7e-19 98.2 73 71.2
BcaB03g14057 Brassica carinata HOM05D001046 ORTHO05D005883 3.5e-19 97.8 74 67.6
FAN17G2519 Fragaria x ananassa HOM05D001046 ORTHO05D005883 3.5e-19 97.8 73 69.9
DCAR_023709 Daucus carota HOM05D001046 ORTHO05D005883 4.6e-19 97.4 73 68.5
MD16G1051700 Malus domestica HOM05D001046 ORTHO05D005883 4.6e-19 97.4 73 69.9
BcaC06g35168 Brassica carinata HOM05D001046 ORTHO05D005883 6.0e-19 97.1 74 67.6
C07p19150 Brassica napus HOM05D001046 ORTHO05D005883 6.0e-19 97.1 74 67.6
BolC7t42425H Brassica oleracea HOM05D001046 ORTHO05D005883 6.0e-19 97.1 74 67.6
Peaxi162Scf00188g00433 Petunia axillaris HOM05D001046 ORTHO05D005883 6.0e-19 97.1 73 69.9
Thhalv10006742m.g Eutrema salsugineum HOM05D001046 ORTHO05D005883 7.8e-19 96.7 74 67.6
FAN07G2005 Fragaria x ananassa HOM05D001046 ORTHO05D005883 7.8e-19 96.7 73 68.5
FAN22G0985 Fragaria x ananassa HOM05D001046 ORTHO05D005883 7.8e-19 96.7 73 68.5
Nitab4.5_0000259g0330 Nicotiana tabacum HOM05D001046 ORTHO05D005883 7.8e-19 96.7 73 68.5
Hund25120 Selenicereus undatus HOM05D001046 ORTHO05D005883 7.8e-19 96.7 73 68.5
FvH4_4g28521 Fragaria vesca HOM05D001046 ORTHO05D005883 1.0e-18 96.3 73 67.1
FAN12G0380 Fragaria x ananassa HOM05D001046 ORTHO05D005883 1.0e-18 96.3 73 67.1
AUR62007774 Chenopodium quinoa HOM05D001046 ORTHO05D005883 1.7e-18 95.5 73 68.5
Nitab4.5_0006347g0030 Nicotiana tabacum HOM05D001046 ORTHO05D005883 1.7e-18 95.5 73 68.5
PSO017G2748 Papaver somniferum HOM05D001046 ORTHO05D005883 1.7e-18 95.5 73 68.5
PSO478G0796 Papaver somniferum HOM05D001046 ORTHO05D005883 1.7e-18 95.5 73 68.5
THA.LOC104808446 Tarenaya hassleriana HOM05D001046 ORTHO05D005883 1.7e-18 95.5 74 64.9
CAN.G184.47 Capsicum annuum HOM05D001046 ORTHO05D005883 2.3e-18 95.1 73 68.5
AL1G39580 Arabidopsis lyrata HOM05D001046 ORTHO05D005883 3.0e-18 94.7 74 66.2
AT1G26170 Arabidopsis thaliana HOM05D001046 ORTHO05D005883 3.0e-18 94.7 74 66.2
AUR62002966 Chenopodium quinoa HOM05D001046 ORTHO05D005883 3.0e-18 94.7 73 68.5
Ciclev10030592m.g Citrus clementina HOM05D001046 ORTHO05D005883 3.0e-18 94.7 74 66.2
Sp1g22490 Schrenkiella parvula HOM05D001046 ORTHO05D005883 3.0e-18 94.7 74 66.2
CANSAT64G1908 Cannabis sativa HOM05D001046 ORTHO05D005883 3.9e-18 94.4 73 69.9
Solyc05g010160.3 Solanum lycopersicum HOM05D001046 ORTHO05D005883 3.9e-18 94.4 73 67.1
Sopen05g005940 Solanum pennellii HOM05D001046 ORTHO05D005883 3.9e-18 94.4 73 67.1
Lj3C1023G11 Lonicera japonica HOM05D001046 ORTHO05D005883 5.1e-18 94.0 73 65.8
Carub.0001s2479 Capsella rubella HOM05D001046 ORTHO05D005883 6.6e-18 93.6 74 64.9
Cc11_g11040 Coffea canephora HOM05D001046 ORTHO05D005883 6.6e-18 93.6 73 64.4
Psat0s251g0080 Pisum sativum HOM05D001046 ORTHO05D005883 6.6e-18 93.6 73 65.8
arahy.Tifrunner.gnm1.ann1.4S8EHX Arachis hypogaea HOM05D001046 ORTHO05D005883 1.1e-17 92.8 73 64.4
arahy.Tifrunner.gnm1.ann1.A78PMJ Arachis hypogaea HOM05D001046 ORTHO05D005883 1.1e-17 92.8 73 64.4
Medtr0010s0220 Medicago truncatula HOM05D001046 ORTHO05D005883 1.1e-17 92.8 73 65.8
ATR0691G253 Amborella trichopoda HOM05D001046 ORTHO05D005883 1.5e-17 92.4 71 67.6
EL10Ac6g14562 Beta vulgaris HOM05D001046 ORTHO05D005883 1.5e-17 92.4 73 65.8
Sabra08G0083000 Salix brachista HOM05D001046 ORTHO05D005883 1.5e-17 92.4 74 68.9
A07p12760 Brassica napus HOM05D001046 ORTHO05D005883 1.9e-17 92.0 74 64.9
Aa31LG7G8840 Aethionema arabicum HOM05D001046 ORTHO05D005883 3.3e-17 91.3 74 63.5
Lj2g0002950 Lotus japonicus HOM05D001046 ORTHO05D005883 9.5e-17 89.7 73 63.0
Oeu002624.1 Olea europaea HOM05D001046 ORTHO05D005883 2.1e-16 88.6 74 62.2
SGA_v2.0_scaffold16G07861 Striga asiatica HOM05D001046 ORTHO05D005883 2.1e-16 88.6 73 60.3
HanXRQChr15g0475941 Helianthus annuus HOM05D001046 ORTHO05D005883 2.8e-16 88.2 73 61.6
Sc14g0007590 Simmondsia chinensis HOM05D001046 ORTHO05D005883 2.8e-16 88.2 73 61.6
Duzib248G1558 Durio zibethinus HOM05D001046 ORTHO05D005883 4.7e-16 87.4 73 64.4
SEGI_02691 Sequoiadendron giganteum HOM05D001046 ORTHO05D005883 4.7e-16 87.4 71 67.6
SalBow8G4857 Salvia bowleyana HOM05D001046 ORTHO05D005883 6.2e-16 87.0 73 61.6
COL.COLO4_27721 Corchorus olitorius HOM05D001046 ORTHO05D005883 1.1e-15 86.3 73 63.0
Migut.L01124 Erythranthe guttata HOM05D001046 ORTHO05D005883 1.1e-15 86.3 73 61.6
Gohir.D12G160700 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.4e-15 85.9 73 63.0
Gorai.008G173700 Gossypium raimondii HOM05D001046 ORTHO05D005883 1.4e-15 85.9 73 63.0
SGA_v2.0_scaffold21G09423 Striga asiatica HOM05D001046 ORTHO05D005883 1.8e-15 85.5 69 58.0
MSTRG.7703 Avicennia marina HOM05D001046 ORTHO05D005883 3.1e-15 84.7 73 58.9
CDE04G1715 Ceratophyllum demersum HOM05D001046 ORTHO05D005883 3.1e-15 84.7 73 63.0
unitig_699.g19897 Utricularia gibba HOM05D001046 ORTHO05D005883 6.8e-15 83.6 73 54.8
HPP92_018028 Vanilla planifolia HOM05D001046 ORTHO05D005883 6.8e-15 83.6 72 56.9
Aqoxy3G00421 Aquilegia oxysepala HOM05D001046 ORTHO05D005883 8.9e-15 83.2 73 58.9
ECA246G0060 Erigeron canadensis HOM05D001046 ORTHO05D005883 8.9e-15 83.2 73 58.9
VMungo1215G2127 Vigna mungo HOM05D001046 ORTHO05D005883 1.5e-14 82.4 74 58.1
PGR102G1932 Punica granatum HOM05D001046 ORTHO05D005883 2.0e-14 82.0 73 58.9
Eucgr.B03078 Eucalyptus grandis HOM05D001046 ORTHO05D005883 2.6e-14 81.6 71 62.0
Glyma.02G128900 Glycine max HOM05D001046 ORTHO05D005883 9.9e-14 79.7 73 57.5
Lalb_Chr04g0255081 Lupinus albus HOM05D001046 ORTHO05D005883 9.9e-14 79.7 73 56.2
Phvul.003G034100 Phaseolus vulgaris HOM05D001046 ORTHO05D005883 6.4e-13 77.0 73 56.2
Glyma.01G093902 Glycine max HOM05D001046 ORTHO05D005883 2.4e-12 75.1 73 54.8
MBI15_g18372_MAGBIO Magnolia biondii HOM05D001046 ORTHO05D005883 3.2e-12 74.7 74 54.1
Pp3c3_32130 Physcomitrium patens HOM05D001046 ORTHO05D005883 3.2e-12 74.7 71 57.7
MBI15_g45230_MAGBIO Magnolia biondii HOM05D001046 ORTHO05D005883 2.1e-11 72.0 72 54.2
Mapoly0176s0015 Marchantia polymorpha HOM05D001046 ORTHO05D005883 2.7e-11 71.6 72 54.2
MELO3C012192.2 Cucumis melo HOM05D001046 ORTHO05D005883 3.5e-11 71.2 73 53.4
CsaV3_5G033760 Cucumis sativus L. HOM05D001046 ORTHO05D005883 1.0e-10 69.7 73 52.1
ClCG05G023270 Citrullus lanatus HOM05D001046 ORTHO05D005883 2.3e-10 68.6 73 50.7
SGA_v2.0_scaffold32G13175 Striga asiatica HOM05D001046 ORTHO05D005883 5.1e-10 67.4 73 52.1
Zm00001eb380420 Zea mays HOM05D001046 ORTHO05D005883 2.5e-09 65.1 72 51.4
CBR_g22326 Chara braunii HOM05D001046 ORTHO05D005883 1.1e-07 59.7 72 47.2
CBR_g23906 Chara braunii HOM05D001046 ORTHO05D005883 2.4e-07 58.5 73 42.5
Sed0023728 Sechium edule HOM05D001046 ORTHO05D005883 5.2e-07 57.4 73 43.8
SGA_v2.0_scaffold32G13147 Striga asiatica HOM05D001046 ORTHO05D005883 2.0e-06 55.5 65 49.2
QL03p044436 Quercus lobata HOM05D001046 ORTHO05D000006 7.6e-06 53.5 34 76.5


User provided reference genes

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