Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.3e-257 891.7 454 100.0
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.1e-238 828.2 454 92.7
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.3e-170 603.6 451 68.7
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.3e-170 603.6 451 68.7
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 4.2e-166 588.6 456 66.7
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 8.7e-164 580.9 456 67.5
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 8.2e-162 574.3 415 71.3
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 8.2e-162 574.3 458 67.0
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 1.1e-161 573.9 460 66.5
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.8e-161 573.2 417 70.7
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 9.0e-161 570.9 456 66.2
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.7e-159 566.6 458 66.2
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 8.4e-159 564.3 455 65.5
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 2.5e-158 562.8 424 69.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 7.1e-158 561.2 457 63.9
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.6e-157 560.1 441 66.9
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.0e-156 557.4 463 64.6
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.9e-155 553.1 427 67.9
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.5e-155 552.7 427 68.1
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 6.3e-154 548.1 432 67.1
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 8.2e-154 547.7 429 66.9
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.1e-153 547.4 415 69.2
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.5e-152 543.5 406 69.7
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.0e-152 543.1 427 65.3
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 2.0e-152 543.1 417 68.6
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.7e-151 540.0 455 63.5
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 2.9e-151 539.3 429 64.8
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 5.0e-151 538.5 419 64.7
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.9e-150 536.6 435 63.2
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 2.5e-150 536.2 419 67.1
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 1.2e-149 533.9 406 66.7
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 7.9e-149 531.2 399 68.2
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 7.9e-149 531.2 425 64.0
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.0e-148 530.8 416 65.4
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.8e-148 530.0 415 67.0
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 5.7e-147 525.0 412 65.3
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 9.7e-147 524.2 453 63.1
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 1.3e-146 523.9 413 66.1
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 1.7e-146 523.5 419 65.4
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 2.2e-146 523.1 419 65.4
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 2.2e-146 523.1 415 63.6
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.7e-146 522.3 405 68.4
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 4.8e-146 521.9 415 65.3
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 6.3e-146 521.5 413 65.4
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 4.5e-144 515.4 430 62.3
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 7.7e-144 514.6 428 60.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 1.7e-143 513.5 401 66.8
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 2.9e-143 512.7 451 61.2
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 5.0e-143 511.9 456 59.4
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.4e-142 510.4 409 62.3
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.9e-142 510.0 418 65.8
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.2e-142 509.2 415 64.6
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 7.2e-142 508.1 425 61.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.7e-141 506.1 457 58.9
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 3.6e-141 505.8 457 59.1
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 7.9e-141 504.6 426 62.9
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 7.9e-141 504.6 379 68.9
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.9e-140 502.3 457 60.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 6.7e-140 501.5 462 59.3
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 3.3e-139 499.2 455 60.0
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.4e-137 493.8 457 58.0
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.4e-137 493.8 459 57.3
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 2.4e-137 493.0 459 58.0
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 4.1e-137 492.3 418 61.0
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 5.3e-137 491.9 457 57.5
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 6.9e-137 491.5 435 60.2
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.2e-136 490.7 459 57.5
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 2.9e-135 486.1 462 56.9
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 5.0e-135 485.3 465 56.8
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 8.5e-135 484.6 463 57.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 8.5e-135 484.6 458 58.1
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.5e-134 483.0 454 57.3
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 7.2e-134 481.5 414 61.6
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.2e-133 480.7 330 75.5
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 6.1e-133 478.4 464 56.2
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 2.3e-132 476.5 376 65.4
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.3e-130 470.7 399 62.2
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 3.7e-130 469.2 376 65.4
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 8.5e-127 458.0 331 70.7
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 3.6e-125 452.6 462 55.0
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 4.4e-123 445.7 484 52.5
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 3.7e-122 442.6 409 57.9
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.1e-118 431.0 354 61.3
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.7e-117 426.4 403 54.8
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 6.1e-117 425.2 328 66.5
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 8.8e-116 421.4 331 65.3
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 4.4e-115 419.1 398 55.8
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 8.6e-111 404.8 564 45.0
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.5e-110 404.1 295 68.1
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 6.3e-106 388.7 370 53.2
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 2.9e-103 379.8 295 67.5
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.2e-98 363.6 404 47.8
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 9.2e-97 358.2 296 61.8
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.6e-96 357.5 365 53.2
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 3.9e-95 352.8 405 47.4
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 2.5e-94 350.1 406 45.3
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.4e-92 344.4 273 65.2
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.8e-92 344.0 272 65.8
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.3e-87 327.8 240 72.5
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 6.2e-85 318.9 419 43.0
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.1e-85 318.5 333 52.3
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 6.8e-76 288.9 241 63.1
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 6.4e-66 255.8 154 80.5
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.8e-50 203.4 257 46.3
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 3.3e-46 190.3 161 60.2
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.6e-43 180.6 167 56.3
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 4.5e-43 179.9 146 58.9
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 5.8e-43 179.5 145 66.9
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.3e-41 172.2 143 64.3
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 9.4e-33 145.6 110 68.2
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.8e-29 134.0 96 70.8
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 6.5e-26 122.9 120 59.2
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 3.9e-23 113.6 105 56.2
Potri.008G115467 Populus trichocarpa HOM05D054562 ORTHO05D050511 3.9e-23 113.6 96 68.8
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.3e-21 108.6 116 57.8
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.0e-18 96.7 91 56.0
Sabra08G0087400 Salix brachista HOM05D054562 ORTHO05D050511 1.8e-15 88.2 78 66.7
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 2.0e-06 58.2 47 61.7
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.0e-06 58.2 50 58.0


User provided reference genes

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