Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.3e-213 746.1 381 100.0
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.2e-190 669.8 381 90.8
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 2.9e-152 542.3 379 72.6
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.2e-134 483.8 380 65.3
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 4.6e-134 481.9 381 66.1
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 3.9e-133 478.8 381 64.6
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.3e-131 473.8 381 64.6
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 3.7e-131 472.2 381 64.8
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 6.2e-131 471.5 382 64.1
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 6.9e-130 468.0 381 64.0
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 2.2e-128 463.0 373 64.1
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 2.2e-128 463.0 383 62.9
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 2.5e-127 459.5 381 61.9
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.5e-127 459.5 381 61.9
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 2.5e-127 459.5 381 63.5
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 9.7e-124 447.6 381 62.2
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.8e-123 446.0 357 65.8
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 8.2e-123 444.5 382 61.0
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.2e-121 440.7 380 60.3
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.5e-121 440.3 378 62.4
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 2.6e-121 439.5 366 62.6
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 2.2e-120 436.4 365 64.4
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.4e-119 433.7 358 63.7
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.2e-119 432.2 354 63.8
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 7.2e-119 431.4 382 59.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.2e-118 430.6 382 60.5
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 4.6e-118 428.7 381 59.3
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 7.9e-118 427.9 381 59.1
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 2.4e-114 416.4 367 59.9
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 9.1e-114 414.5 382 56.5
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 3.4e-113 412.5 380 57.1
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 7.7e-113 411.4 382 57.1
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 3.8e-112 409.1 379 56.7
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 7.9e-110 401.4 321 63.9
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 7.9e-110 401.4 381 56.2
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 8.8e-109 397.9 381 55.1
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 4.4e-108 395.6 381 54.1
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.8e-107 392.9 385 55.3
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 8.2e-107 391.3 381 53.0
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.1e-106 391.0 339 60.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.1e-106 389.4 366 55.2
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 4.1e-106 389.0 379 53.6
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.1e-106 389.0 381 52.5
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 2.6e-105 386.3 380 54.2
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 3.5e-105 386.0 378 51.6
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 5.9e-105 385.2 383 53.3
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 7.7e-105 384.8 380 53.7
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 6.5e-104 381.7 369 56.9
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.1e-103 380.9 380 52.6
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.9e-103 380.2 366 52.5
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.6e-102 377.1 378 52.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.7e-102 376.3 381 51.7
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 3.6e-102 375.9 382 53.1
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 1.8e-101 373.6 379 52.5
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.8e-101 373.6 372 51.1
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 6.7e-101 371.7 359 55.2
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 1.1e-98 364.4 383 51.4
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 1.5e-95 354.0 381 50.9
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 3.4e-92 342.8 364 52.2
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 4.4e-92 342.4 381 47.0
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 7.5e-92 341.7 270 66.7
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.7e-89 333.2 378 46.0
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 5.9e-89 332.0 380 47.4
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.0e-88 331.3 265 66.4
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 5.0e-88 328.9 302 56.0
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.1e-87 327.8 382 46.3
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.9e-87 327.0 371 45.8
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.9e-87 327.0 382 45.8
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 7.2e-87 325.1 379 44.3
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 9.4e-87 324.7 262 64.1
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 1.6e-86 323.9 380 45.8
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 2.7e-86 323.2 371 45.6
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 8.0e-86 321.6 371 45.6
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.8e-83 313.2 380 44.5
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 4.8e-83 312.4 370 46.5
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 4.8e-83 312.4 382 45.3
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.1e-82 311.2 382 45.0
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 2.4e-82 310.1 386 49.2
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 7.0e-82 308.5 382 44.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 1.0e-80 304.7 365 46.0
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 2.3e-80 303.5 380 44.5
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 2.3e-80 303.5 367 45.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 8.6e-80 301.6 405 42.0
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 4.4e-76 289.3 477 38.6
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 1.1e-74 284.6 369 43.9
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.9e-67 260.0 382 42.1
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.6e-65 254.2 378 40.7
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.3e-64 251.1 263 51.3
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.3e-64 251.1 382 39.8
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.9e-63 247.3 238 58.8
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.2e-60 238.0 259 48.6
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.0e-52 210.7 372 37.6
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 9.2e-50 201.8 372 36.6
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 6.0e-49 199.1 264 43.9
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 7.8e-49 198.7 370 36.2
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 6.6e-40 169.1 133 65.4
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.1e-37 161.8 140 60.0
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.8e-37 161.0 116 67.2
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 2.4e-34 150.6 370 32.7
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 8.7e-32 142.1 316 34.5
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 1.5e-31 141.4 170 46.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.1e-29 135.2 212 41.0
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.4e-29 134.8 312 33.7
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 1.2e-28 131.7 120 50.0
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 8.1e-22 109.0 210 33.3
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.0e-20 104.4 149 43.6
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 3.8e-19 100.1 180 37.8
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.1e-17 94.4 103 48.5
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.3e-16 91.7 115 47.0


User provided reference genes

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