Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 2.4e-84 315.5 159 100.0
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.5e-65 252.3 163 82.8
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 4.9e-45 184.9 165 66.1
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 1.0e-42 177.2 158 63.3
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 3.4e-38 162.2 165 57.6
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.4e-36 156.8 165 58.2
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 4.6e-35 151.8 164 57.9
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 7.3e-33 144.4 172 52.9
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.4e-31 140.2 166 53.6
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 1.5e-30 136.7 170 52.9
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.5e-30 136.7 167 50.3
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 4.4e-30 135.2 165 50.3
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 9.9e-30 134.0 175 52.6
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 2.4e-28 129.4 171 48.0
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 7.1e-28 127.9 165 44.2
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 3.5e-27 125.6 171 46.8
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 3.5e-27 125.6 171 46.2
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 4.6e-27 125.2 165 50.9
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 2.5e-25 119.4 174 44.3
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 9.6e-25 117.5 143 49.7
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 4.7e-24 115.2 146 51.4
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 4.7e-24 115.2 164 42.7
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 3.1e-23 112.5 169 45.0
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 3.1e-23 112.5 161 42.2
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 6.8e-23 111.3 170 42.9
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 8.9e-23 110.9 175 44.0
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.2e-22 110.5 168 44.0
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 1.2e-22 110.5 171 40.9
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 2.0e-22 109.8 171 44.4
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 5.8e-22 108.2 167 41.9
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 1.3e-21 107.1 175 44.0
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.3e-21 107.1 175 44.0
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 2.2e-21 106.3 146 47.3
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.9e-21 105.9 175 41.7
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 3.2e-20 102.4 170 40.0
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.4e-20 101.7 175 41.1
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 5.4e-20 101.7 170 43.5
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 7.1e-20 101.3 162 41.4
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 2.1e-19 99.8 164 39.0
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 4.6e-19 98.6 159 44.0
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 6.0e-19 98.2 168 42.9
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 1.0e-18 97.4 169 43.8
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 1.3e-18 97.1 170 39.4
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 5.1e-18 95.1 141 39.7
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 6.6e-18 94.7 169 34.9
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.1e-17 94.0 162 40.1
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 1.1e-17 94.0 163 41.1
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 1.5e-17 93.6 160 36.9
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 1.9e-17 93.2 163 39.3
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 2.5e-17 92.8 127 36.2
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 7.3e-17 91.3 163 38.0
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 1.3e-16 90.5 160 35.6
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 2.8e-16 89.4 167 39.5
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 3.6e-16 89.0 164 39.0
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 6.2e-16 88.2 163 36.2
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 1.8e-15 86.7 161 39.1
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.4e-15 86.3 159 42.1
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 2.4e-15 86.3 133 40.6
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 3.1e-15 85.9 165 35.2
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 3.1e-15 85.9 165 35.2
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 3.1e-15 85.9 165 35.2
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 5.3e-15 85.1 165 33.3
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 5.3e-15 85.1 168 36.3
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 2.6e-14 82.8 169 39.6
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 7.6e-14 81.3 166 36.1
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 6.4e-13 78.2 166 39.8
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 2.4e-12 76.3 179 34.1
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 2.4e-12 76.3 99 48.5
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 4.2e-12 75.5 173 35.8
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 4.2e-12 75.5 161 40.4
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 2.1e-11 73.2 153 41.2
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 1.8e-07 60.1 165 33.3
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 4.5e-06 55.5 170 32.4


User provided reference genes

Program Settings