Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.3e-171 606.3 296 100.0
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 8.2e-46 188.3 306 41.8
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 7.7e-44 181.8 266 43.6
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 4.2e-42 176.0 266 42.5
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 2.7e-41 173.3 264 41.7
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 3.6e-41 172.9 205 48.8
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 7.9e-41 171.8 266 42.1
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 2.0e-39 167.2 266 39.8
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 2.6e-39 166.8 266 40.6
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 2.6e-39 166.8 262 40.5
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 3.3e-39 166.4 266 41.0
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 4.4e-39 166.0 268 41.4
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 5.7e-39 165.6 266 41.7
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 7.4e-39 165.2 263 40.3
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.7e-38 164.1 276 40.2
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 1.7e-38 164.1 263 40.7
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 2.2e-38 163.7 266 40.2
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 2.8e-38 163.3 266 41.4
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 2.8e-38 163.3 263 41.1
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 3.7e-38 162.9 268 41.8
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 3.7e-38 162.9 264 40.5
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 3.7e-38 162.9 263 40.3
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 3.7e-38 162.9 268 41.4
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 3.7e-38 162.9 259 40.9
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 4.8e-38 162.5 266 40.6
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 6.3e-38 162.2 266 41.4
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 6.3e-38 162.2 266 41.0
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 6.3e-38 162.2 266 41.0
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 6.3e-38 162.2 259 40.9
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 8.2e-38 161.8 263 39.2
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 8.2e-38 161.8 266 39.8
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 1.1e-37 161.4 266 40.6
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 1.1e-37 161.4 266 39.5
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 1.1e-37 161.4 263 39.9
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 1.4e-37 161.0 266 41.0
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 1.4e-37 161.0 266 41.0
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 1.4e-37 161.0 259 40.9
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 1.4e-37 161.0 259 40.9
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 2.4e-37 160.2 266 39.5
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 2.4e-37 160.2 297 38.7
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 4.1e-37 159.5 263 39.5
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 4.1e-37 159.5 262 40.1
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 5.3e-37 159.1 262 40.1
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 5.3e-37 159.1 332 34.9
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 9.1e-37 158.3 266 39.5
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 9.1e-37 158.3 263 39.9
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.2e-36 157.9 259 39.4
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 1.2e-36 157.9 259 40.2
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 1.2e-36 157.9 260 39.2
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.6e-36 157.5 262 39.3
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 1.6e-36 157.5 266 38.3
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.0e-36 157.1 259 39.4
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.6e-36 156.8 262 39.7
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.6e-36 156.8 273 39.6
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 2.6e-36 156.8 263 39.2
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 3.5e-36 156.4 263 38.0
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 4.5e-36 156.0 266 38.0
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 5.9e-36 155.6 263 40.3
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 7.7e-36 155.2 266 38.3
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 7.7e-36 155.2 266 37.2
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 7.7e-36 155.2 259 40.5
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 1.0e-35 154.8 266 39.5
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 1.0e-35 154.8 265 38.1
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 1.7e-35 154.1 263 39.5
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 1.7e-35 154.1 263 39.5
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 2.2e-35 153.7 262 39.3
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 2.9e-35 153.3 263 37.3
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 2.9e-35 153.3 263 37.6
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 2.9e-35 153.3 263 40.3
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 3.8e-35 152.9 263 38.8
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 5.0e-35 152.5 266 37.6
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 8.5e-35 151.8 263 37.6
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 8.5e-35 151.8 266 38.3
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 8.5e-35 151.8 266 38.3
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 1.1e-34 151.4 263 38.0
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 1.1e-34 151.4 263 36.9
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.5e-34 151.0 263 38.4
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.9e-34 150.6 266 39.1
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 2.5e-34 150.2 266 38.3
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 4.2e-34 149.4 266 38.3
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 4.2e-34 149.4 263 37.6
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 7.2e-34 148.7 265 37.0
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 7.2e-34 148.7 217 41.9
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 9.4e-34 148.3 269 36.8
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 9.4e-34 148.3 266 38.7
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 4.7e-33 146.0 259 37.8
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 8.0e-33 145.2 265 38.5
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 8.0e-33 145.2 239 39.7
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 1.0e-32 144.8 262 37.4
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 2.3e-32 143.7 262 38.2
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 3.0e-32 143.3 206 42.7
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 8.8e-32 141.7 262 37.8
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 2.6e-31 140.2 276 35.1
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 7.5e-31 138.7 240 38.8
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.7e-30 137.5 210 42.4
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.4e-29 134.4 295 33.2
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 2.0e-28 130.6 262 36.3
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 2.7e-28 130.2 210 39.0
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 5.9e-28 129.0 258 36.4
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 1.7e-27 127.5 267 37.8
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 5.5e-26 122.5 193 40.4
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 2.1e-25 120.6 204 39.2
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 4.7e-25 119.4 256 35.9
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.8e-24 117.5 147 48.3
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.3e-24 117.1 178 43.8
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 4.0e-24 116.3 124 51.6
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 8.8e-24 115.2 201 34.8
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 1.5e-23 114.4 259 34.7
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 2.2e-22 110.5 124 50.8
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 1.8e-21 107.5 134 45.5
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.1e-21 106.7 294 31.0
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 5.4e-21 105.9 197 37.6
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 1.6e-20 104.4 70 68.6
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 1.7e-19 100.9 201 36.3
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 2.3e-19 100.5 238 31.9
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 3.8e-19 99.8 67 70.1
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 1.5e-15 87.8 124 44.4
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 2.6e-15 87.0 139 37.4
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 9.8e-15 85.1 135 41.5
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 8.3e-14 82.0 75 52.0
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.8e-08 64.3 104 37.5
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 3.4e-07 60.1 92 38.0
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 9.8e-07 58.5 93 37.6
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.4e-06 55.8 46 58.7


User provided reference genes

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