Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0069600 Salix brachista HOM05D009517 ORTHO05D011612 3.1e-105 385.2 203 100.0
Potri.010G097100 Populus trichocarpa HOM05D009517 ORTHO05D011612 4.1e-65 251.9 150 89.3
Potri.008G145000 Populus trichocarpa HOM05D009517 ORTHO05D011612 8.7e-55 217.6 150 78.0
Dinv26546 Davidia involucrata HOM05D009517 ORTHO05D011612 1.2e-43 180.6 141 70.2
Prupe.1G343700 Prunus persica HOM05D009517 ORTHO05D011612 1.5e-43 180.3 145 66.9
QL03p042931 Quercus lobata HOM05D009517 ORTHO05D011612 2.3e-39 166.4 131 67.9
FvH4_4g36470 Fragaria vesca HOM05D009517 ORTHO05D011612 1.5e-38 163.7 154 63.0
FAN07G2507 Fragaria x ananassa HOM05D009517 ORTHO05D011612 1.5e-38 163.7 154 63.0
FAN12G1831 Fragaria x ananassa HOM05D009517 ORTHO05D011612 1.5e-38 163.7 154 63.0
FAN22G0198 Fragaria x ananassa HOM05D009517 ORTHO05D011612 3.3e-38 162.5 154 63.0
FAN17G1386 Fragaria x ananassa HOM05D009517 ORTHO05D011612 1.3e-37 160.6 154 62.3
RcHm_v2.0_Chr4g0446231 Rosa chinensis HOM05D009517 ORTHO05D011612 1.8e-36 156.8 155 63.2
MD13G1009000 Malus domestica HOM05D009517 ORTHO05D011612 2.4e-36 156.4 145 62.1
MD16G1007000 Malus domestica HOM05D009517 ORTHO05D011612 1.0e-34 151.0 143 60.1
TWI77G0330 Tripterygium wilfordii HOM05D009517 ORTHO05D011612 1.8e-31 140.2 151 58.9
MBI06_g19436_MAGBIO Magnolia biondii HOM05D009517 ORTHO05D011612 1.8e-28 130.2 152 54.6
PSO063G2919 Papaver somniferum HOM05D009517 ORTHO05D011612 5.3e-28 128.6 153 54.9
HPP92_008578 Vanilla planifolia HOM05D009517 ORTHO05D011612 6.9e-28 128.3 135 55.6
Nn3g18697 Nelumbo nucifera HOM05D009517 ORTHO05D011612 1.0e-26 124.4 113 61.9
PSO782G3294 Papaver somniferum HOM05D009517 ORTHO05D011612 2.5e-25 119.8 150 52.7
CDE07G1492 Ceratophyllum demersum HOM05D009517 ORTHO05D011612 4.2e-25 119.0 140 50.7
HPP92_008557 Vanilla planifolia HOM05D009517 ORTHO05D011612 5.5e-25 118.6 128 53.9
CDE04G1930 Ceratophyllum demersum HOM05D009517 ORTHO05D011612 1.6e-24 117.1 140 50.7
Os04g0672300 Oryza sativa ssp. japonica HOM05D009517 ORTHO05D011612 7.9e-24 114.8 140 52.9
MBI03_g22263_MAGBIO Magnolia biondii HOM05D009517 ORTHO05D011612 6.5e-18 95.1 129 45.0
CDE04G1647 Ceratophyllum demersum HOM05D009517 ORTHO05D011612 8.5e-18 94.7 138 43.5
Zm00001eb433470 Zea mays HOM05D009517 ORTHO05D011612 1.0e-15 87.8 140 50.7
Zm00001eb066620 Zea mays HOM05D009517 ORTHO05D011612 5.1e-15 85.5 139 46.0
ATR0762G059 Amborella trichopoda HOM05D009517 ORTHO05D011612 1.1e-09 67.8 155 36.8
MBI18_g06808_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 2.1e-08 63.5 128 35.2
HPP92_020782 Vanilla planifolia HOM05D009517 ORTHO05D011612 2.1e-08 63.5 92 47.8
Rhsim02G0112300 Rhododendron simsii HOM05D004361 ORTHO05D004706 2.3e-07 60.1 171 31.6
PGR004G2667 Punica granatum HOM05D004361 ORTHO05D004706 5.1e-07 58.9 168 30.4
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 6.7e-07 58.5 154 33.8
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 6.7e-07 58.5 153 30.7
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 8.8e-07 58.2 153 32.0
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 1.1e-06 57.8 160 31.2
MBI02_g10098_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 1.5e-06 57.4 134 37.3
Prupe.4G026600 Prunus persica HOM05D004361 ORTHO05D004706 2.0e-06 57.0 154 33.1
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 2.0e-06 57.0 158 31.0
MD05G1340800 Malus domestica HOM05D004361 ORTHO05D004706 3.3e-06 56.2 160 30.6
RcHm_v2.0_Chr5g0004031 Rosa chinensis HOM05D004361 ORTHO05D004706 4.4e-06 55.8 159 31.4
Thhalv10026295m.g Eutrema salsugineum HOM05D004361 ORTHO05D004706 5.7e-06 55.5 165 32.1
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 5.7e-06 55.5 158 32.9
Actinidia11836 Actinidia chinensis HOM05D004361 ORTHO05D004706 7.4e-06 55.1 170 33.5
CSS0045436 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 7.4e-06 55.1 162 32.1
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 7.4e-06 55.1 155 31.0


User provided reference genes

Program Settings