Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0064700 Salix brachista HOM05D000225 ORTHO05D003554 1.1e-74 283.1 136 100.0
Potri.010G078700 Populus trichocarpa HOM05D000225 ORTHO05D003554 1.1e-21 107.1 137 49.6
Manes.15G035700 Manihot esculenta HOM05D000225 ORTHO05D003554 1.6e-20 103.2 136 47.1
Potri.008G160600 Populus trichocarpa HOM05D000225 ORTHO05D003554 6.1e-20 101.3 136 48.5
Sabra08G0122400 Salix brachista HOM05D000225 ORTHO05D003554 1.4e-19 100.1 136 46.3
Hma1.2p1_2099F.1_g313990 Hydrangea macrophylla HOM05D000225 ORTHO05D003554 5.7e-18 94.7 135 43.0
FvH4_4g02221 Fragaria vesca HOM05D000225 ORTHO05D003554 7.4e-18 94.4 136 41.9
FAN12G1174 Fragaria x ananassa HOM05D000225 ORTHO05D003554 7.4e-18 94.4 136 41.9
Lsat_1_v5_gn_3_124400 Lactuca sativa HOM05D000225 ORTHO05D003554 2.2e-17 92.8 136 44.9
Lj6A653G77 Lonicera japonica HOM05D000225 ORTHO05D003554 2.8e-17 92.4 137 43.1
vmacro15400 Vaccinium macrocarpon HOM05D000225 ORTHO05D003554 2.8e-17 92.4 142 41.5
Actinidia08450 Actinidia chinensis HOM05D000225 ORTHO05D003554 8.2e-17 90.9 141 46.1
HanXRQChr03g0092501 Helianthus annuus HOM05D000225 ORTHO05D003554 8.2e-17 90.9 136 43.4
RcHm_v2.0_Chr4g0389541 Rosa chinensis HOM05D000225 ORTHO05D003554 1.4e-16 90.1 136 41.2
Atru.chr4.2285 Acer truncatum HOM05D000225 ORTHO05D003554 3.1e-16 89.0 136 44.1
CANSAT78G0865 Cannabis sativa HOM05D000225 ORTHO05D003554 3.1e-16 89.0 136 38.2
Dinv44611 Davidia involucrata HOM05D000225 ORTHO05D003554 3.1e-16 89.0 136 42.6
Ciclev10004551m.g Citrus clementina HOM05D000225 ORTHO05D003554 4.1e-16 88.6 136 41.2
Prupe.1G027000 Prunus persica HOM05D000225 ORTHO05D003554 4.1e-16 88.6 134 41.8
Ah.08g213660 Amaranthus hybridus HOM05D000225 ORTHO05D003554 9.1e-16 87.4 136 40.4
Haze_11269 Corylus avellana HOM05D000225 ORTHO05D003554 9.1e-16 87.4 139 39.6
TWI09G0570 Tripterygium wilfordii HOM05D000225 ORTHO05D003554 9.1e-16 87.4 136 41.2
DCAR_002357 Daucus carota HOM05D000225 ORTHO05D003554 1.5e-15 86.7 136 41.2
GSVIVG01018093001 Vitis vinifera HOM05D000225 ORTHO05D003554 1.5e-15 86.7 138 44.2
ECA240G1015 Erigeron canadensis HOM05D000225 ORTHO05D003554 2.6e-15 85.9 136 41.9
MD13G1203800 Malus domestica HOM05D000225 ORTHO05D003554 2.6e-15 85.9 136 41.2
arahy.Tifrunner.gnm1.ann1.35XI12 Arachis hypogaea HOM05D000225 ORTHO05D003554 4.5e-15 85.1 139 39.6
CSS0010297 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D003554 4.5e-15 85.1 141 41.8
HanXRQChr13g0424591 Helianthus annuus HOM05D000225 ORTHO05D003554 4.5e-15 85.1 136 39.7
Lj6g0021940 Lotus japonicus HOM05D000225 ORTHO05D003554 4.5e-15 85.1 137 41.6
vmacro17028 Vaccinium macrocarpon HOM05D003054 ORTHO05D003376 4.5e-15 85.1 131 40.5
MSTRG.9933 Avicennia marina HOM05D000225 ORTHO05D003554 5.9e-15 84.7 138 44.9
QL06p015040 Quercus lobata HOM05D000225 ORTHO05D003554 5.9e-15 84.7 135 40.7
MSTRG.4088 Avicennia marina HOM05D000225 ORTHO05D003554 7.7e-15 84.3 140 42.9
Sc19g0003890 Simmondsia chinensis HOM05D000225 ORTHO05D003554 7.7e-15 84.3 136 39.0
Solyc09g083210.3 Solanum lycopersicum HOM05D000225 ORTHO05D003554 7.7e-15 84.3 138 38.4
arahy.Tifrunner.gnm1.ann1.2WY12S Arachis hypogaea HOM05D000225 ORTHO05D003554 1.0e-14 84.0 138 39.1
Gohir.D09G224100 Gossypium hirsutum HOM05D000225 ORTHO05D003554 1.0e-14 84.0 136 41.9
Gorai.006G245600 Gossypium raimondii HOM05D000225 ORTHO05D003554 1.0e-14 84.0 136 41.9
Thecc.04G243700 Theobroma cacao HOM05D000225 ORTHO05D003554 1.7e-14 83.2 136 39.0
CsaV3_3G012700 Cucumis sativus L. HOM05D000225 ORTHO05D003554 2.2e-14 82.8 137 40.1
Cfa008400 Carpinus fangiana HOM05D000225 ORTHO05D003554 3.8e-14 82.0 139 38.1
Glyma.02G000400 Glycine max HOM05D000225 ORTHO05D003554 3.8e-14 82.0 137 40.1
EL10Ac7g17698 Beta vulgaris HOM05D000225 ORTHO05D003554 5.0e-14 81.6 139 38.1
AUR62025430 Chenopodium quinoa HOM05D000225 ORTHO05D003554 5.0e-14 81.6 136 37.5
Ca_26325_v3 Cicer arietinum L. HOM05D000225 ORTHO05D003554 5.0e-14 81.6 137 38.7
Duzib151G1111 Durio zibethinus HOM05D000225 ORTHO05D003554 5.0e-14 81.6 136 41.9
Rhsim02G0032400 Rhododendron simsii HOM05D000225 ORTHO05D003554 5.0e-14 81.6 136 40.4
Migut.G00415 Erythranthe guttata HOM05D000225 ORTHO05D003554 6.5e-14 81.3 137 42.3
COL.COLO4_15766 Corchorus olitorius HOM05D000225 ORTHO05D003554 8.5e-14 80.9 136 41.2
CiPaw.01G192400 Carya illinoinensis HOM05D000225 ORTHO05D003554 1.1e-13 80.5 141 37.6
Cc00_g20680 Coffea canephora HOM05D000225 ORTHO05D003554 1.1e-13 80.5 133 37.6
MELO3C006481.2 Cucumis melo HOM05D000225 ORTHO05D003554 1.1e-13 80.5 137 39.4
DCAR_030708 Daucus carota HOM05D000225 ORTHO05D003554 1.1e-13 80.5 138 41.3
Eucgr.H03181 Eucalyptus grandis HOM05D000225 ORTHO05D003554 1.1e-13 80.5 137 42.3
Gohir.A09G222000 Gossypium hirsutum HOM05D000225 ORTHO05D003554 1.1e-13 80.5 136 41.9
Sopen09g032120 Solanum pennellii HOM05D000225 ORTHO05D003554 1.1e-13 80.5 137 38.7
CAN.G626.4 Capsicum annuum HOM05D000225 ORTHO05D003554 1.4e-13 80.1 137 38.0
AUR62008808 Chenopodium quinoa HOM05D000225 ORTHO05D003554 1.4e-13 80.1 136 37.5
Hund05492 Selenicereus undatus HOM05D000225 ORTHO05D003554 1.9e-13 79.7 137 38.7
PGSC0003DMG400006088 Solanum tuberosum HOM05D000225 ORTHO05D003554 2.5e-13 79.3 137 38.0
VMungo0720G0757 Vigna mungo HOM05D000225 ORTHO05D003554 2.5e-13 79.3 137 39.4
AUR62008809 Chenopodium quinoa HOM05D000225 ORTHO05D003554 3.2e-13 79.0 138 39.1
PGR004G2440 Punica granatum HOM05D000225 ORTHO05D003554 3.2e-13 79.0 137 44.5
Aqoxy2G03515 Aquilegia oxysepala HOM05D000225 ORTHO05D003554 5.5e-13 78.2 136 38.2
SHI00572 Sapria himalayana HOM05D000225 ORTHO05D003554 5.5e-13 78.2 137 39.4
Solyc10g045610.1 Solanum lycopersicum HOM05D000225 ORTHO05D003554 5.5e-13 78.2 136 37.5
Sed0011890 Sechium edule HOM05D000225 ORTHO05D003554 7.2e-13 77.8 138 39.9
Lalb_Chr03g0037921 Lupinus albus HOM05D000225 ORTHO05D003554 9.4e-13 77.4 136 38.2
Sopen09g032130 Solanum pennellii HOM05D000225 ORTHO05D003554 9.4e-13 77.4 137 37.2
AUR62025429 Chenopodium quinoa HOM05D000225 ORTHO05D003554 1.6e-12 76.6 138 37.0
PGSC0003DMG400006086 Solanum tuberosum HOM05D000225 ORTHO05D003554 2.1e-12 76.3 137 37.2
PGSC0003DMG400006087 Solanum tuberosum HOM05D000225 ORTHO05D003554 2.1e-12 76.3 137 37.2
ClCG05G004700 Citrullus lanatus HOM05D000225 ORTHO05D003554 2.7e-12 75.9 139 41.0
SalBow2G2098 Salvia bowleyana HOM05D000225 ORTHO05D003554 3.6e-12 75.5 126 42.1
Phvul.007G280200 Phaseolus vulgaris HOM05D000225 ORTHO05D003554 6.1e-12 74.7 137 38.7
Nn1g02547 Nelumbo nucifera HOM05D000225 ORTHO05D003554 7.9e-12 74.3 142 38.7
Peaxi162Scf01416g00014 Petunia axillaris HOM05D000225 ORTHO05D003554 1.0e-11 73.9 134 36.6
Psat6g102960 Pisum sativum HOM05D000225 ORTHO05D003554 3.9e-11 72.0 137 33.6
AUR62025432 Chenopodium quinoa HOM05D000225 ORTHO05D003554 8.8e-11 70.9 137 35.0
PSO210G5248 Papaver somniferum HOM05D000225 ORTHO05D003554 8.8e-11 70.9 142 33.8
MD16G1205900 Malus domestica HOM05D000225 ORTHO05D003554 1.1e-10 70.5 43 72.1
Medtr5g042440 Medicago truncatula HOM05D000225 ORTHO05D003554 1.5e-10 70.1 137 32.8
PSO238G0035 Papaver somniferum HOM05D000225 ORTHO05D003554 2.6e-10 69.3 142 33.8
Gohir.D10G147500 Gossypium hirsutum HOM05D000225 ORTHO05D003554 3.3e-10 68.9 130 36.2
Gorai.011G164600 Gossypium raimondii HOM05D000225 ORTHO05D003554 3.3e-10 68.9 130 36.2
TPR.G22481 Trifolium pratense HOM05D000225 ORTHO05D003554 3.3e-10 68.9 134 32.8
Nitab4.5_0004203g0010 Nicotiana tabacum HOM05D000225 ORTHO05D003554 5.7e-10 68.2 122 36.9
TAR362G1029 Trochodendron aralioides HOM05D000225 ORTHO05D003554 5.7e-10 68.2 139 37.4
MBI04_g35054_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D003554 7.4e-10 67.8 137 38.0
FAN17G2834 Fragaria x ananassa HOM05D000225 ORTHO05D003554 1.1e-08 63.9 112 36.6
Zm00001eb250700 Zea mays HOM05D000225 ORTHO05D003554 1.5e-07 60.1 132 31.8
Os02g0681700 Oryza sativa ssp. japonica HOM05D000225 ORTHO05D003554 2.0e-07 59.7 133 34.6
Nitab4.5_0000525g0010 Nicotiana tabacum HOM05D000225 ORTHO05D003554 1.7e-06 56.6 125 34.4
Lalb_Chr04g0249501 Lupinus albus HOM05D000046 ORTHO05D000195 6.5e-06 54.7 116 32.8
HPP92_014519 Vanilla planifolia HOM05D001408 ORTHO05D003554 6.5e-06 54.7 125 36.8
Ciclev10028493m.g Citrus clementina HOM05D000046 ORTHO05D000195 8.5e-06 54.3 111 33.3


User provided reference genes

Program Settings