Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0056600 Salix brachista HOM05D006838 ORTHO05D008915 5.0e-54 214.2 105 100.0
Potri.010G087000 Populus trichocarpa HOM05D006838 ORTHO05D008915 5.3e-32 141.0 143 56.6
Sabra08G0117200 Salix brachista HOM05D006838 ORTHO05D008915 6.5e-30 134.0 142 52.8
Manes.03G177700 Manihot esculenta HOM05D006838 ORTHO05D008915 1.5e-29 132.9 143 53.1
Thecc.04G232900 Theobroma cacao HOM05D006838 ORTHO05D008915 3.0e-27 125.2 141 51.1
Duzib052G0907 Durio zibethinus HOM05D006838 ORTHO05D008915 3.3e-26 121.7 141 51.8
Gorai.002G024200 Gossypium raimondii HOM05D006838 ORTHO05D008915 5.7e-26 120.9 141 50.4
TWI73G0194 Tripterygium wilfordii HOM05D006838 ORTHO05D008915 9.7e-26 120.2 142 50.0
Gohir.D01G021700 Gossypium hirsutum HOM05D006838 ORTHO05D008915 1.3e-25 119.8 141 49.6
Eucgr.H03458 Eucalyptus grandis HOM05D006838 ORTHO05D008915 4.8e-25 117.9 139 46.0
CSS0050318 Camellia sinensis var. sinensis HOM05D006838 ORTHO05D008915 6.3e-25 117.5 141 44.7
Cfa015659 Carpinus fangiana HOM05D006838 ORTHO05D008915 1.4e-24 116.3 137 48.9
Eucgr.H03460 Eucalyptus grandis HOM05D006838 ORTHO05D008915 1.4e-24 116.3 139 45.3
Medtr5g006360 Medicago truncatula HOM05D006838 ORTHO05D008915 1.8e-24 115.9 138 48.6
Cpa.g.sc58.98 Carica papaya HOM05D006838 ORTHO05D008915 5.3e-24 114.4 141 46.1
Haze_00889 Corylus avellana HOM05D000001 ORTHO05D000003 9.1e-24 113.6 137 47.4
TPR.G37905 Trifolium pratense HOM05D006838 ORTHO05D008915 2.0e-23 112.5 139 47.5
CANSAT78G0040 Cannabis sativa HOM05D006838 ORTHO05D008915 3.5e-23 111.7 138 47.8
FAN12G2261 Fragaria x ananassa HOM05D006838 ORTHO05D008915 4.5e-23 111.3 138 47.8
LjContig00408g0014048 Lotus japonicus HOM05D006838 ORTHO05D008915 5.9e-23 110.9 141 44.7
Psat4g210280 Pisum sativum HOM05D006838 ORTHO05D008915 5.9e-23 110.9 139 46.8
Prupe.1G014900 Prunus persica HOM05D006838 ORTHO05D008915 7.7e-23 110.5 137 45.3
ECA246G0107 Erigeron canadensis HOM05D006838 ORTHO05D008915 1.0e-22 110.2 138 46.4
QL06p002133 Quercus lobata HOM05D006838 ORTHO05D008915 1.0e-22 110.2 136 48.5
Atru.chr4.2454 Acer truncatum HOM05D006838 ORTHO05D008915 1.3e-22 109.8 142 43.7
arahy.Tifrunner.gnm1.ann1.00V3DL Arachis hypogaea HOM05D006838 ORTHO05D008915 1.3e-22 109.8 144 45.1
PGR004G0798 Punica granatum HOM05D006838 ORTHO05D008915 1.3e-22 109.8 141 46.8
Actinidia08489 Actinidia chinensis HOM05D006838 ORTHO05D008915 3.8e-22 108.2 142 43.7
arahy.Tifrunner.gnm1.ann1.08EL86 Arachis hypogaea HOM05D006838 ORTHO05D008915 3.8e-22 108.2 143 44.1
Dinv13999 Davidia involucrata HOM05D006838 ORTHO05D008915 3.8e-22 108.2 139 43.2
RcHm_v2.0_Chr4g0416051 Rosa chinensis HOM05D006838 ORTHO05D008915 3.8e-22 108.2 138 46.4
EL10Ac3g06416 Beta vulgaris HOM05D006838 ORTHO05D008915 2.5e-21 105.5 139 42.4
Hund12124 Selenicereus undatus HOM05D006838 ORTHO05D008915 4.2e-21 104.8 139 42.4
HanXRQChr10g0288871 Helianthus annuus HOM05D006838 ORTHO05D008915 5.5e-21 104.4 141 41.8
Gohir.A01G023700 Gossypium hirsutum HOM05D006838 ORTHO05D008915 9.4e-21 103.6 134 46.3
Lsat_1_v5_gn_5_35600 Lactuca sativa HOM05D006838 ORTHO05D008915 9.4e-21 103.6 135 43.0
Aa31LG5G4930 Aethionema arabicum HOM05D006838 ORTHO05D008915 1.6e-20 102.8 142 45.1
CiPaw.01G167000 Carya illinoinensis HOM05D006838 ORTHO05D008915 1.6e-20 102.8 136 45.6
Peaxi162Scf00092g00717 Petunia axillaris HOM05D006838 ORTHO05D008915 1.6e-20 102.8 136 40.4
Sc13g0004470 Simmondsia chinensis HOM05D006838 ORTHO05D008915 2.7e-20 102.1 138 44.2
PGSC0003DMG400032255 Solanum tuberosum HOM05D006838 ORTHO05D008915 2.7e-20 102.1 135 40.0
MD13G1194100 Malus domestica HOM05D006838 ORTHO05D008915 3.6e-20 101.7 138 43.5
Nitab4.5_0000316g0010 Nicotiana tabacum HOM05D006838 ORTHO05D008915 4.7e-20 101.3 136 39.7
CAN.G1094.4 Capsicum annuum HOM05D006838 ORTHO05D008915 6.1e-20 100.9 135 40.7
Solyc09g082115.1 Solanum lycopersicum HOM05D006838 ORTHO05D008915 6.1e-20 100.9 135 39.3
Ah.13g072770 Amaranthus hybridus HOM05D006838 ORTHO05D008915 8.0e-20 100.5 141 41.1
THA.LOC104816050 Tarenaya hassleriana HOM05D006838 ORTHO05D008915 8.0e-20 100.5 141 44.0
CARHR125890 Cardamine hirsuta HOM05D006838 ORTHO05D008915 1.0e-19 100.1 134 45.5
Sopen09g031000 Solanum pennellii HOM05D006838 ORTHO05D008915 1.0e-19 100.1 135 38.5
CsaV3_7G022460 Cucumis sativus L. HOM05D006838 ORTHO05D008915 1.4e-19 99.8 143 41.3
Nitab4.5_0001342g0050 Nicotiana tabacum HOM05D006838 ORTHO05D008915 1.4e-19 99.8 136 39.7
AUR62038604 Chenopodium quinoa HOM05D006838 ORTHO05D008915 1.8e-19 99.4 139 39.6
SGA_v2.0_scaffold39G15215 Striga asiatica HOM05D006838 ORTHO05D008915 1.8e-19 99.4 137 40.1
BcaB02g10450 Brassica carinata HOM05D006838 ORTHO05D008915 3.0e-19 98.6 137 43.1
AUR62033621 Chenopodium quinoa HOM05D006838 ORTHO05D008915 3.0e-19 98.6 138 40.6
Cc03_g03870 Coffea canephora HOM05D006838 ORTHO05D008915 3.0e-19 98.6 138 39.1
FvH4_4g16340 Fragaria vesca HOM05D006838 ORTHO05D008915 3.0e-19 98.6 130 46.2
A05p13410 Brassica napus HOM05D006838 ORTHO05D008915 5.2e-19 97.8 136 42.6
C04p17530 Brassica napus HOM05D006838 ORTHO05D008915 5.2e-19 97.8 136 41.9
BraA05t20279Z Brassica rapa HOM05D006838 ORTHO05D008915 5.2e-19 97.8 136 42.6
Ca_24400_v3 Cicer arietinum L. HOM05D006838 ORTHO05D008915 5.2e-19 97.8 143 40.6
BolC4t23300H Brassica oleracea HOM05D006838 ORTHO05D008915 6.8e-19 97.4 136 41.2
Sp4g14500 Schrenkiella parvula HOM05D006838 ORTHO05D008915 8.8e-19 97.1 136 42.6
AT2G32090 Arabidopsis thaliana HOM05D006838 ORTHO05D008915 1.5e-18 96.3 134 42.5
MSTRG.4035 Avicennia marina HOM05D006838 ORTHO05D008915 2.6e-18 95.5 139 38.8
Thhalv10017983m.g Eutrema salsugineum HOM05D006838 ORTHO05D008915 3.4e-18 95.1 134 42.5
Actinidia36957 Actinidia chinensis HOM05D006838 ORTHO05D008915 5.7e-18 94.4 138 40.6
unitig_32.g11729 Utricularia gibba HOM05D006838 ORTHO05D008915 9.8e-18 93.6 138 37.7
Sed0026467 Sechium edule HOM05D006838 ORTHO05D008915 1.3e-17 93.2 143 40.6
AL103U10040 Arabidopsis lyrata HOM05D006838 ORTHO05D008915 1.7e-17 92.8 134 43.3
AL4G27470 Arabidopsis lyrata HOM05D006838 ORTHO05D008915 1.7e-17 92.8 134 41.8
Carub.0004s1344 Capsella rubella HOM05D006838 ORTHO05D008915 1.7e-17 92.8 133 44.4
TAR365G1174 Trochodendron aralioides HOM05D006838 ORTHO05D008915 2.2e-17 92.4 139 38.1
Actinidia25664 Actinidia chinensis HOM05D006838 ORTHO05D008915 1.4e-16 89.7 94 48.9
COL.COLO4_21487 Corchorus olitorius HOM05D006838 ORTHO05D000003 5.4e-16 87.8 115 45.2
MELO3C012654.2 Cucumis melo HOM05D006838 ORTHO05D008915 5.4e-16 87.8 170 35.3
Nn4g26336 Nelumbo nucifera HOM05D006838 ORTHO05D008915 2.0e-15 85.9 137 35.8
PSO210G6947 Papaver somniferum HOM05D006838 ORTHO05D008915 2.0e-15 85.9 132 38.6
PSO832G4526 Papaver somniferum HOM05D006838 ORTHO05D008915 2.0e-15 85.9 132 38.6
Aqoxy5G00461 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 2.7e-15 85.5 130 36.9
Potri.008G153602 Populus trichocarpa HOM05D006838 ORTHO05D008915 5.9e-15 84.3 71 60.6
DCAR_030640 Daucus carota HOM05D006838 ORTHO05D008915 3.8e-14 81.6 128 37.5
Medtr5g006370 Medicago truncatula HOM05D006838 ORTHO05D008915 6.5e-14 80.9 134 37.3
SalBow2G1460 Salvia bowleyana HOM05D001359 ORTHO05D001200 8.5e-14 80.5 127 34.6
Migut.G00344 Erythranthe guttata HOM05D006838 ORTHO05D008915 1.1e-13 80.1 134 36.6
TPR.G14291 Trifolium pratense HOM05D006838 ORTHO05D008915 1.1e-13 80.1 141 35.5
SalBow2G1378 Salvia bowleyana HOM05D006838 ORTHO05D008915 4.2e-13 78.2 155 31.0
Lsat_1_v5_gn_5_35680 Lactuca sativa HOM05D006838 ORTHO05D008915 2.1e-12 75.9 121 38.0
TPR.G38007 Trifolium pratense HOM05D006838 ORTHO05D008915 3.6e-12 75.1 138 36.2
FAN19G3212 Fragaria x ananassa HOM05D006838 ORTHO05D008915 4.7e-12 74.7 140 37.1
FvH4_1g03680 Fragaria vesca HOM05D006838 ORTHO05D008915 6.1e-12 74.3 139 36.0
MBI12_g03925_MAGBIO Magnolia biondii HOM05D006838 ORTHO05D008915 8.0e-12 73.9 138 33.3
Rhsim02G0025700 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.0e-11 72.0 45 68.9
vmacro15346 Vaccinium macrocarpon HOM05D006838 ORTHO05D008915 3.0e-11 72.0 45 66.7
Zm00001eb052640 Zea mays HOM05D006838 ORTHO05D008915 4.0e-11 71.6 130 34.6
Os03g0659300 Oryza sativa ssp. japonica HOM05D006838 ORTHO05D008915 1.2e-10 70.1 130 33.1
Pp3c10_20820 Physcomitrium patens HOM05D006838 ORTHO05D008915 1.5e-10 69.7 136 32.4
Aqoxy6G02670 Aquilegia oxysepala HOM05D006838 ORTHO05D008915 7.5e-10 67.4 52 57.7
CDE05G3614 Ceratophyllum demersum HOM05D006838 ORTHO05D008915 4.9e-09 64.7 164 27.4
FvH4_4g16350 Fragaria vesca HOM05D006838 ORTHO05D046149 8.3e-09 63.9 133 35.3
AagrBONN_evm.TU.Sc2ySwM_362.295 Anthoceros agrestis HOM05D006838 ORTHO05D008915 1.1e-08 63.5 133 32.3
Dinv44539 Davidia involucrata HOM05D006838 ORTHO05D008915 1.1e-08 63.5 52 57.7
GSVIVG01017987001 Vitis vinifera HOM05D006838 ORTHO05D008915 1.1e-08 63.5 124 29.8
FAN17G0591 Fragaria x ananassa HOM05D006838 ORTHO05D008915 1.4e-08 63.2 48 66.7
SEGI_21646 Sequoiadendron giganteum HOM05D006838 ORTHO05D008915 1.4e-08 63.2 131 29.8
Aqoxy4G00384 Aquilegia oxysepala HOM05D000001 ORTHO05D000003 3.1e-08 62.0 52 51.9
Ciclev10006131m.g Citrus clementina HOM05D006838 ORTHO05D008915 3.1e-08 62.0 50 64.0
Mapoly0185s0021 Marchantia polymorpha HOM05D006838 ORTHO05D008915 3.1e-08 62.0 134 28.4
AagrBONN_evm.TU.Sc2ySwM_362.293 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.5e-07 58.5 134 29.9
RcHm_v2.0_Chr4g0409411 Rosa chinensis HOM05D006838 ORTHO05D008915 4.5e-07 58.2 127 35.4
SMO304G0126 Selaginella moellendorffii HOM05D006838 ORTHO05D008915 1.7e-06 56.2 118 25.4
SHI00446 Sapria himalayana HOM05D006838 ORTHO05D008915 2.9e-06 55.5 48 58.3
FAN22G1840 Fragaria x ananassa HOM05D006838 ORTHO05D008915 5.0e-06 54.7 46 65.2


User provided reference genes

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