Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0055300 Salix brachista HOM05D002310 ORTHO05D002326 4.9e-202 707.6 363 100.0
Potri.010G087400 Populus trichocarpa HOM05D002310 ORTHO05D002326 4.6e-123 445.3 274 86.9
Potri.008G152900 Populus trichocarpa HOM05D002310 ORTHO05D002326 2.1e-99 366.7 281 72.6
Sabra08G0116500 Salix brachista HOM05D002310 ORTHO05D002326 4.9e-93 345.5 282 71.3
Manes.03G178600 Manihot esculenta HOM05D002310 ORTHO05D002326 2.8e-56 223.4 301 52.8
FAN22G1532 Fragaria x ananassa HOM05D002310 ORTHO05D002326 3.2e-44 183.3 306 46.1
Cpa.g.sc58.109 Carica papaya HOM05D002310 ORTHO05D002326 4.2e-36 156.4 280 44.6
Atru.ctg752_3.77 Acer truncatum HOM05D002310 ORTHO05D002326 8.0e-35 152.1 325 40.6
CiPaw.01G166000 Carya illinoinensis HOM05D002310 ORTHO05D002326 1.4e-34 151.4 397 38.0
Dinv44536 Davidia involucrata HOM05D002310 ORTHO05D002326 1.4e-34 151.4 364 37.6
GSVIVG01017976001 Vitis vinifera HOM05D002310 ORTHO05D002326 3.0e-34 150.2 305 44.6
Gorai.006G068300 Gossypium raimondii HOM05D002310 ORTHO05D002326 4.4e-33 146.4 291 44.0
Rhsim04G0202200 Rhododendron simsii HOM05D002310 ORTHO05D002326 2.2e-32 144.1 320 41.2
COL.COLO4_21477 Corchorus olitorius HOM05D002310 ORTHO05D002326 1.8e-31 141.0 292 44.2
TWI09G0856 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 1.8e-31 141.0 337 39.8
Gohir.A09G056100 Gossypium hirsutum HOM05D002310 ORTHO05D002326 2.4e-31 140.6 310 42.9
Cfa015645 Carpinus fangiana HOM05D002310 ORTHO05D002326 3.1e-31 140.2 302 40.7
Gohir.D09G055300 Gossypium hirsutum HOM05D002310 ORTHO05D002326 1.2e-30 138.3 310 42.6
Lj5g0003431 Lotus japonicus HOM05D002310 ORTHO05D002326 4.5e-30 136.3 285 43.2
Cc03_g03780 Coffea canephora HOM05D002310 ORTHO05D002326 5.9e-30 136.0 289 37.4
Lj6A608G62 Lonicera japonica HOM05D002310 ORTHO05D002326 5.9e-30 136.0 198 46.5
RcHm_v2.0_Chr4g0416221 Rosa chinensis HOM05D002310 ORTHO05D002326 7.7e-30 135.6 318 40.6
Duzib151G0125 Durio zibethinus HOM05D002310 ORTHO05D002326 3.8e-29 133.3 319 40.4
FvH4_4g15540 Fragaria vesca HOM05D002310 ORTHO05D002326 6.6e-29 132.5 308 39.0
FAN12G2432 Fragaria x ananassa HOM05D002310 ORTHO05D002326 6.6e-29 132.5 308 39.0
Nn4g26323 Nelumbo nucifera HOM05D002310 ORTHO05D002326 6.6e-29 132.5 352 37.2
AT3G22430 Arabidopsis thaliana HOM05D002310 ORTHO05D002326 8.6e-29 132.1 243 42.4
Ca_10898_v3 Cicer arietinum L. HOM05D002310 ORTHO05D002326 2.5e-28 130.6 294 41.8
Actinidia40145 Actinidia chinensis HOM05D002310 ORTHO05D002326 4.2e-28 129.8 308 38.6
CiPaw.02G097300 Carya illinoinensis HOM05D002310 ORTHO05D002326 7.2e-28 129.0 323 38.1
FAN07G0096 Fragaria x ananassa HOM05D002310 ORTHO05D002326 2.8e-27 127.1 324 36.4
MD16G1193900 Malus domestica HOM05D002310 ORTHO05D002326 8.0e-27 125.6 310 42.3
CsaV3_7G022500 Cucumis sativus L. HOM05D002310 ORTHO05D002326 1.0e-26 125.2 345 36.5
Thhalv10020450m.g Eutrema salsugineum HOM05D002310 ORTHO05D002326 1.0e-26 125.2 266 39.5
CDE02G0428 Ceratophyllum demersum HOM05D002310 ORTHO05D002326 1.8e-26 124.4 317 37.9
FAN17G0990 Fragaria x ananassa HOM05D002310 ORTHO05D002326 1.8e-26 124.4 300 39.7
Haze_00900 Corylus avellana HOM05D002310 ORTHO05D002326 3.0e-26 123.6 307 37.5
Actinidia23510 Actinidia chinensis HOM05D002310 ORTHO05D002326 4.0e-26 123.2 236 41.1
arahy.Tifrunner.gnm1.ann1.5P4QKH Arachis hypogaea HOM05D002310 ORTHO05D002326 1.2e-25 121.7 300 39.0
CANSAT78G0613 Cannabis sativa HOM05D002310 ORTHO05D002326 1.2e-25 121.7 351 39.0
PGSC0003DMG400030084 Solanum tuberosum HOM05D002310 ORTHO05D002326 1.5e-25 121.3 393 35.1
AL3G36740 Arabidopsis lyrata HOM05D002310 ORTHO05D002326 2.0e-25 120.9 251 39.8
Ciclev10005503m.g Citrus clementina HOM05D002310 ORTHO05D002326 2.0e-25 120.9 284 41.9
Medtr1g103740 Medicago truncatula HOM05D002310 ORTHO05D002326 3.4e-25 120.2 216 44.0
CSS0035785 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 7.5e-25 119.0 382 34.6
MSTRG.4031 Avicennia marina HOM05D002310 ORTHO05D002326 9.8e-25 118.6 309 37.5
CARHR098340 Cardamine hirsuta HOM05D002310 ORTHO05D002326 9.8e-25 118.6 212 41.5
Duzib212G0102 Durio zibethinus HOM05D002310 ORTHO05D002326 9.8e-25 118.6 200 45.0
THA.LOC104808546 Tarenaya hassleriana HOM05D002310 ORTHO05D002326 9.8e-25 118.6 317 38.2
BcaB06g26348 Brassica carinata HOM05D002310 ORTHO05D002326 1.7e-24 117.9 252 40.9
TAR362G0728 Trochodendron aralioides HOM05D002310 ORTHO05D002326 3.7e-24 116.7 405 33.6
DCAR_027217 Daucus carota HOM05D002310 ORTHO05D002326 8.3e-24 115.5 382 34.6
Migut.G00339 Erythranthe guttata HOM05D002310 ORTHO05D002326 1.1e-23 115.2 284 39.1
Eucgr.H03481 Eucalyptus grandis HOM05D002310 ORTHO05D002326 1.1e-23 115.2 232 39.2
Solyc09g076040.3 Solanum lycopersicum HOM05D002310 ORTHO05D002326 1.4e-23 114.8 401 33.7
ClCG06G006230 Citrullus lanatus HOM05D002310 ORTHO05D002326 1.8e-23 114.4 345 35.4
Psat6g207480 Pisum sativum HOM05D002310 ORTHO05D002326 1.8e-23 114.4 293 39.2
Oeu020078.1 Olea europaea HOM05D002310 ORTHO05D002326 4.1e-23 113.2 308 35.1
Peaxi162Scf00092g01019 Petunia axillaris HOM05D002310 ORTHO05D002326 4.1e-23 113.2 318 38.1
EL10As3g23290 Beta vulgaris HOM05D002310 ORTHO05D002326 5.4e-23 112.8 207 38.6
SGA_v2.0_scaffold257G45713 Striga asiatica HOM05D002310 ORTHO05D002326 7.0e-23 112.5 224 41.5
MELO3C012650.2 Cucumis melo HOM05D002310 ORTHO05D002326 9.2e-23 112.1 378 36.0
arahy.Tifrunner.gnm1.ann1.Q8TT5G Arachis hypogaea HOM05D002310 ORTHO05D002326 3.5e-22 110.2 198 42.4
ECA240G3014 Erigeron canadensis HOM05D002310 ORTHO05D002326 3.5e-22 110.2 236 38.1
Oeu011619.2 Olea europaea HOM05D002310 ORTHO05D002326 3.5e-22 110.2 213 40.8
Sc15g0003290 Simmondsia chinensis HOM05D002310 ORTHO05D002326 3.5e-22 110.2 306 38.6
Glyma.20G146000 Glycine max HOM05D002310 ORTHO05D002326 4.5e-22 109.8 279 37.6
Sp3g20200 Schrenkiella parvula HOM05D002310 ORTHO05D002326 5.9e-22 109.4 273 37.0
Ah.04g157050 Amaranthus hybridus HOM05D002310 ORTHO05D002326 1.3e-21 108.2 189 39.7
CDE05G2383 Ceratophyllum demersum HOM05D002310 ORTHO05D002326 1.3e-21 108.2 309 33.7
Phvul.007G057400 Phaseolus vulgaris HOM05D002310 ORTHO05D002326 1.3e-21 108.2 293 35.5
TWI73G1015 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 1.7e-21 107.8 318 37.7
Glyma.10G248100 Glycine max HOM05D002310 ORTHO05D002326 2.9e-21 107.1 279 37.3
Nitab4.5_0004258g0040 Nicotiana tabacum HOM05D002310 ORTHO05D002326 3.9e-21 106.7 272 34.9
PGR004G1373 Punica granatum HOM05D002310 ORTHO05D002326 3.9e-21 106.7 259 39.4
SalBow2G1797 Salvia bowleyana HOM05D002310 ORTHO05D002326 3.9e-21 106.7 331 34.7
Thecc.04G232000 Theobroma cacao HOM05D002310 ORTHO05D002326 3.9e-21 106.7 317 36.6
VMungo0720G0449 Vigna mungo HOM05D002310 ORTHO05D002326 5.0e-21 106.3 295 36.9
BcaC05g28069 Brassica carinata HOM05D002310 ORTHO05D002326 1.1e-20 105.1 247 38.1
C05p40910 Brassica napus HOM05D002310 ORTHO05D002326 1.1e-20 105.1 247 38.1
BolC5t32833H Brassica oleracea HOM05D002310 ORTHO05D002326 1.1e-20 105.1 247 38.1
Sopen09g030870 Solanum pennellii HOM05D002310 ORTHO05D002326 1.5e-20 104.8 324 35.2
Hma1.2p1_1344F.1_g277120 Hydrangea macrophylla HOM05D002310 ORTHO05D002326 1.9e-20 104.4 361 33.5
Carub.0003s2261 Capsella rubella HOM05D002310 ORTHO05D002326 2.5e-20 104.0 204 38.2
Lsat_1_v5_gn_7_67261 Lactuca sativa HOM05D002310 ORTHO05D002326 3.3e-20 103.6 308 36.0
QL06p002477 Quercus lobata HOM05D002310 ORTHO05D002326 3.3e-20 103.6 334 33.8
BraA05t21506Z Brassica rapa HOM05D002310 ORTHO05D002326 7.3e-20 102.4 244 38.9
SGA_v2.0_scaffold39G15233 Striga asiatica HOM05D002310 ORTHO05D002326 2.1e-19 100.9 255 39.6
TPR.G5506 Trifolium pratense HOM05D002310 ORTHO05D002326 1.0e-18 98.6 301 36.5
A05p26290 Brassica napus HOM05D002310 ORTHO05D002326 1.8e-18 97.8 243 38.3
HPP92_024362 Vanilla planifolia HOM05D002310 ORTHO05D002326 3.1e-18 97.1 309 32.4
Prupe.1G013600 Prunus persica HOM05D002310 ORTHO05D002326 4.0e-18 96.7 324 35.2
HanXRQChr05g0145901 Helianthus annuus HOM05D002310 ORTHO05D002326 5.2e-18 96.3 323 32.5
Nitab4.5_0024240g0010 Nicotiana tabacum HOM05D002310 ORTHO05D002326 5.2e-18 96.3 309 33.3
CSS0045550 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 2.0e-17 94.4 317 34.1
AUR62034749 Chenopodium quinoa HOM05D002310 ORTHO05D002326 7.5e-17 92.4 209 39.2
Aqoxy2G03391 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 8.3e-16 89.0 423 32.4
Sed0017994 Sechium edule HOM05D002310 ORTHO05D002326 1.9e-15 87.8 335 34.9
AUR62033632 Chenopodium quinoa HOM05D002310 ORTHO05D002326 9.2e-15 85.5 203 37.4
PSO210G3829 Papaver somniferum HOM05D002310 ORTHO05D002326 9.2e-15 85.5 343 30.9
TAR362G0281 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.2e-14 85.1 363 32.0
Lalb_Chr02g0140601 Lupinus albus HOM05D002310 ORTHO05D002326 6.0e-14 82.8 188 33.0
CAN.G490.5 Capsicum annuum HOM05D002310 ORTHO05D002326 7.8e-14 82.4 185 37.3
Ah.13g072680 Amaranthus hybridus HOM05D002310 ORTHO05D002326 6.6e-13 79.3 300 35.0
TAR636G0317 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.1e-12 78.6 256 31.6
Os03g0159200 Oryza sativa ssp. japonica HOM05D002310 ORTHO05D002326 1.5e-12 78.2 185 33.5
Sc19g0004150 Simmondsia chinensis HOM05D002310 ORTHO05D002326 8.0e-11 72.4 409 28.4
ATR0697G286 Amborella trichopoda HOM05D002310 ORTHO05D002326 6.8e-10 69.3 375 27.7
TAR362G0961 Trochodendron aralioides HOM05D002310 ORTHO05D002326 2.0e-09 67.8 349 28.7
Dinv13995 Davidia involucrata HOM05D002310 ORTHO05D002326 4.4e-09 66.6 77 49.4
Os11g0579700 Oryza sativa ssp. japonica HOM05D002310 ORTHO05D002326 1.1e-07 62.0 193 28.5
Nn7g37310 Nelumbo nucifera HOM05D002310 ORTHO05D002326 5.4e-07 59.7 46 65.2
PSO832G1500 Papaver somniferum HOM05D002310 ORTHO05D002326 2.7e-06 57.4 145 32.4
Zm00001eb403270 Zea mays HOM05D002310 ORTHO05D002326 7.8e-06 55.8 171 29.8


User provided reference genes

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